RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
PTPN9-206ENST00000618819 GBP3Q9H0R5 595 aa17.07■□□□□ 0.32
PTPN9-206ENST00000618819 STAMBPO95630 424 aa17.07■□□□□ 0.32
PTPN9-206ENST00000618819 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
PTPN9-206ENST00000618819 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
PTPN9-206ENST00000618819 NEBLO76041 1014 aa17.06■□□□□ 0.32
PTPN9-206ENST00000618819 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
PTPN9-206ENST00000618819 KIF3BO15066 747 aa17.06■□□□□ 0.32
PTPN9-206ENST00000618819 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
PTPN9-206ENST00000618819 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
PTPN9-206ENST00000618819 CLGNO14967 610 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 ATP2C2O75185 946 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
PTPN9-206ENST00000618819 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 LMAN1P49257 510 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPN9-206ENST00000618819 CCDC178Q5BJE1 867 aa17.05■□□□□ 0.32
PTPN9-206ENST00000618819 ANKRD30AQ9BXX3 1397 aa17.04■□□□□ 0.32
PTPN9-206ENST00000618819 SPATA24Q86W54 205 aa17.04■□□□□ 0.32
PTPN9-206ENST00000618819 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
PTPN9-206ENST00000618819 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
PTPN9-206ENST00000618819 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
PTPN9-206ENST00000618819 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
PTPN9-206ENST00000618819 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
PTPN9-206ENST00000618819 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
PTPN9-206ENST00000618819 MCM4P33991 863 aa17.03■□□□□ 0.32
PTPN9-206ENST00000618819 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
PTPN9-206ENST00000618819 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
PTPN9-206ENST00000618819 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
PTPN9-206ENST00000618819 CCDC175P0C221 793 aa17.02■□□□□ 0.32
PTPN9-206ENST00000618819 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
PTPN9-206ENST00000618819 PPM1EQ8WY54 764 aa17.02■□□□□ 0.32
PTPN9-206ENST00000618819 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
PTPN9-206ENST00000618819 EID1Q9Y6B2 187 aa17.02■□□□□ 0.32
PTPN9-206ENST00000618819 KIF18AQ8NI77 898 aa17.02■□□□□ 0.31
PTPN9-206ENST00000618819 GSTTP1A0A1W2PQM5 241 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 FAM177BA6PVY3 158 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
PTPN9-206ENST00000618819 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
PTPN9-206ENST00000618819 GNAI1P63096 354 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 TMCO5BA8MYB1 307 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 HNRNPMP52272 730 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPN9-206ENST00000618819 UBE2Q2Q8WVN8 375 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 USP47Q96K76 1375 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
PTPN9-206ENST00000618819 MATR3P43243 847 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN9-206ENST00000618819 KIF5CO60282 957 aa17■□□□□ 0.31
PTPN9-206ENST00000618819 CTR9Q6PD62 1173 aa17■□□□□ 0.31
PTPN9-206ENST00000618819 CCDC160A6NGH7 325 aa17■□□□□ 0.31
PTPN9-206ENST00000618819 ANAPC15P60006 121 aa17■□□□□ 0.31
PTPN9-206ENST00000618819 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
PTPN9-206ENST00000618819 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
PTPN9-206ENST00000618819 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPN9-206ENST00000618819 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
PTPN9-206ENST00000618819 MAP3K11Q16584 847 aa16.99■□□□□ 0.31
PTPN9-206ENST00000618819 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
PTPN9-206ENST00000618819 SPA17Q15506 151 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 CTNNBL1Q8WYA6 563 aaPredicted RBP16.98■□□□□ 0.31
PTPN9-206ENST00000618819 GCOM1H8Y6P7 765 aaPredicted RBP16.98■□□□□ 0.31
PTPN9-206ENST00000618819 MYZAPP0CAP1 466 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 IRX3P78415 501 aaPredicted RBP16.98■□□□□ 0.31
PTPN9-206ENST00000618819 ZNF397Q8NF99 534 aaPredicted RBP16.98■□□□□ 0.31
PTPN9-206ENST00000618819 CDCA7LQ96GN5 454 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 SPECC1Q5M775 1068 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
PTPN9-206ENST00000618819 DDX23Q9BUQ8 820 aaKnown RBP16.98■□□□□ 0.31
PTPN9-206ENST00000618819 HIP1O00291 1037 aa16.97■□□□□ 0.31
PTPN9-206ENST00000618819 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
PTPN9-206ENST00000618819 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
PTPN9-206ENST00000618819 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
PTPN9-206ENST00000618819 ANKRD1Q15327 319 aa16.96■□□□□ 0.31
PTPN9-206ENST00000618819 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
PTPN9-206ENST00000618819 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.3
PTPN9-206ENST00000618819 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 MACROD2A1Z1Q3 448 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 IMMTQ16891 758 aaKnown RBP16.95■□□□□ 0.3
PTPN9-206ENST00000618819 MCM3P25205 808 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 HLTFQ14527 1009 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPN9-206ENST00000618819 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 KIF2AO00139 706 aaPredicted RBP16.95■□□□□ 0.3
PTPN9-206ENST00000618819 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 LIG1P18858 919 aa16.95■□□□□ 0.3
PTPN9-206ENST00000618819 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
PTPN9-206ENST00000618819 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
PTPN9-206ENST00000618819 CPLX3Q8WVH0 158 aa16.94■□□□□ 0.3
PTPN9-206ENST00000618819 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
PTPN9-206ENST00000618819 DAAM2Q86T65 1068 aa16.94■□□□□ 0.3
PTPN9-206ENST00000618819 SIL1Q9H173 461 aa16.94■□□□□ 0.3
PTPN9-206ENST00000618819 SOGA1O94964 1423 aa16.94■□□□□ 0.3
PTPN9-206ENST00000618819 PSMD1Q99460 953 aa16.93■□□□□ 0.3
PTPN9-206ENST00000618819 ZBTB9Q96C00 473 aa16.93■□□□□ 0.3
PTPN9-206ENST00000618819 DESP17661 470 aa16.93■□□□□ 0.3
PTPN9-206ENST00000618819 CFAP57Q96MR6 1250 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 316.1 ms