RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 PIK3R4Q99570 1358 aa18.53■□□□□ 0.56
SRRT-217ENST00000618411 HMGN5P82970 282 aaKnown RBP18.52■□□□□ 0.56
SRRT-217ENST00000618411 ARHGAP45Q92619 1136 aa18.52■□□□□ 0.56
SRRT-217ENST00000618411 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.56
SRRT-217ENST00000618411 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
SRRT-217ENST00000618411 ST18O60284 1047 aa18.52■□□□□ 0.55
SRRT-217ENST00000618411 ZHX1Q9UKY1 873 aaPredicted RBP18.52■□□□□ 0.55
SRRT-217ENST00000618411 ABCC1P33527 1531 aa18.51■□□□□ 0.55
SRRT-217ENST00000618411 GSPT1P15170 499 aaKnown RBP18.51■□□□□ 0.55
SRRT-217ENST00000618411 KIF1BO60333 1816 aa18.51■□□□□ 0.55
SRRT-217ENST00000618411 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
SRRT-217ENST00000618411 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
SRRT-217ENST00000618411 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
SRRT-217ENST00000618411 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
SRRT-217ENST00000618411 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
SRRT-217ENST00000618411 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
SRRT-217ENST00000618411 GTF2F1P35269 517 aaKnown RBP eCLIP18.5■□□□□ 0.555e-6■■■■□ 24.4
SRRT-217ENST00000618411 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
SRRT-217ENST00000618411 GTPBP4Q9BZE4 634 aaKnown RBP18.5■□□□□ 0.55
SRRT-217ENST00000618411 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
SRRT-217ENST00000618411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
SRRT-217ENST00000618411 PLEKHM2Q8IWE5 1019 aa18.49■□□□□ 0.55
SRRT-217ENST00000618411 ZGPATQ8N5A5 531 aaKnown RBP18.49■□□□□ 0.55
SRRT-217ENST00000618411 INTS3Q68E01 1043 aaKnown RBP18.48■□□□□ 0.55
SRRT-217ENST00000618411 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
SRRT-217ENST00000618411 TSPY26PQ9H489 355 aa18.48■□□□□ 0.55
SRRT-217ENST00000618411 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
SRRT-217ENST00000618411 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
SRRT-217ENST00000618411 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
SRRT-217ENST00000618411 RNF214Q8ND24 703 aa18.47■□□□□ 0.55
SRRT-217ENST00000618411 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
SRRT-217ENST00000618411 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
SRRT-217ENST00000618411 KIF20AO95235 890 aa18.46■□□□□ 0.55
SRRT-217ENST00000618411 PIBF1Q8WXW3 757 aa18.46■□□□□ 0.55
SRRT-217ENST00000618411 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
SRRT-217ENST00000618411 ZNF710Q8N1W2 664 aa18.46■□□□□ 0.55
SRRT-217ENST00000618411 UGGT1Q9NYU2 1555 aa18.46■□□□□ 0.55
SRRT-217ENST00000618411 SYAP1Q96A49 352 aaPredicted RBP18.45■□□□□ 0.54
SRRT-217ENST00000618411 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
SRRT-217ENST00000618411 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
SRRT-217ENST00000618411 ZFYVE16Q7Z3T8 1539 aa18.45■□□□□ 0.54
SRRT-217ENST00000618411 ABCC4O15439 1325 aa18.44■□□□□ 0.54
SRRT-217ENST00000618411 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
SRRT-217ENST00000618411 CASC1Q6TDU7 716 aa18.44■□□□□ 0.54
SRRT-217ENST00000618411 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
SRRT-217ENST00000618411 NOLC1Q14978 699 aaKnown RBP eCLIP18.43■□□□□ 0.54
SRRT-217ENST00000618411 FAM184AQ8NB25 1140 aa18.43■□□□□ 0.54
SRRT-217ENST00000618411 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
SRRT-217ENST00000618411 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
SRRT-217ENST00000618411 VAMP4O75379 141 aa18.42■□□□□ 0.54
SRRT-217ENST00000618411 PHF14O94880 888 aa18.42■□□□□ 0.54
SRRT-217ENST00000618411 LETM1O95202 739 aaPredicted RBP18.42■□□□□ 0.54
SRRT-217ENST00000618411 KIF3AQ9Y496 699 aa18.42■□□□□ 0.54
SRRT-217ENST00000618411 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
SRRT-217ENST00000618411 REC8O95072 547 aa18.41■□□□□ 0.54
SRRT-217ENST00000618411 MROH2AA6NES4 1674 aa18.41■□□□□ 0.54
SRRT-217ENST00000618411 BRD1O95696 1058 aa18.4■□□□□ 0.54
SRRT-217ENST00000618411 CBX1P83916 185 aa18.4■□□□□ 0.54
SRRT-217ENST00000618411 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
SRRT-217ENST00000618411 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
SRRT-217ENST00000618411 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
SRRT-217ENST00000618411 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
SRRT-217ENST00000618411 KIF3BO15066 747 aa18.39■□□□□ 0.53
SRRT-217ENST00000618411 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
SRRT-217ENST00000618411 FANCAO15360 1455 aa18.39■□□□□ 0.53
SRRT-217ENST00000618411 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
SRRT-217ENST00000618411 MCM2P49736 904 aa18.38■□□□□ 0.53
SRRT-217ENST00000618411 FKBP5Q13451 457 aaPredicted RBP18.38■□□□□ 0.53
SRRT-217ENST00000618411 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SRRT-217ENST00000618411 SDSP20132 328 aa18.38■□□□□ 0.53
SRRT-217ENST00000618411 FGD1P98174 961 aa18.38■□□□□ 0.53
SRRT-217ENST00000618411 TSC1Q92574 1164 aa18.38■□□□□ 0.53
SRRT-217ENST00000618411 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
SRRT-217ENST00000618411 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
SRRT-217ENST00000618411 ADGRB3O60242 1522 aa18.37■□□□□ 0.53
SRRT-217ENST00000618411 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
SRRT-217ENST00000618411 TMX3Q96JJ7 454 aa18.36■□□□□ 0.53
SRRT-217ENST00000618411 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
SRRT-217ENST00000618411 TULP4Q9NRJ4 1543 aa18.36■□□□□ 0.53
SRRT-217ENST00000618411 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
SRRT-217ENST00000618411 C16orf71Q8IYS4 520 aaPredicted RBP18.36■□□□□ 0.53
SRRT-217ENST00000618411 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
SRRT-217ENST00000618411 ERC2O15083 957 aa18.35■□□□□ 0.53
SRRT-217ENST00000618411 CUL4AQ13619 759 aa18.35■□□□□ 0.53
SRRT-217ENST00000618411 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
SRRT-217ENST00000618411 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
SRRT-217ENST00000618411 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
SRRT-217ENST00000618411 BCL2L12Q9HB09 334 aa18.35■□□□□ 0.53
SRRT-217ENST00000618411 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
SRRT-217ENST00000618411 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
SRRT-217ENST00000618411 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
SRRT-217ENST00000618411 GNAI1P63096 354 aa18.33■□□□□ 0.53
SRRT-217ENST00000618411 PDCL2Q8N4E4 241 aa18.33■□□□□ 0.53
SRRT-217ENST00000618411 TSPYL6Q8N831 410 aa18.33■□□□□ 0.53
SRRT-217ENST00000618411 A0A1W2PP64 1363 aa18.33■□□□□ 0.53
SRRT-217ENST00000618411 NEK4P51957 841 aa18.33■□□□□ 0.52
SRRT-217ENST00000618411 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
SRRT-217ENST00000618411 PPLO60437 1756 aa18.33■□□□□ 0.52
SRRT-217ENST00000618411 ANKRD44Q8N8A2 993 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 TTC12Q9H892 705 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms