RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
POLR2A-209ENST00000617998 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
POLR2A-209ENST00000617998 RUNDC1Q96C34 613 aa13.36□□□□□ -0.27
POLR2A-209ENST00000617998 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
POLR2A-209ENST00000617998 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
POLR2A-209ENST00000617998 ACEP12821 1306 aa13.36□□□□□ -0.27
POLR2A-209ENST00000617998 FEZ1Q99689 392 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
POLR2A-209ENST00000617998 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 DAPK1P53355 1430 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 KDM5BQ9UGL1 1544 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 PAF1Q8N7H5 531 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 H0YIN7 160 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 GPTP24298 496 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 TRIM29Q14134 588 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 L1TD1Q5T7N2 865 aaKnown RBP13.35□□□□□ -0.27
POLR2A-209ENST00000617998 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
POLR2A-209ENST00000617998 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
POLR2A-209ENST00000617998 RUFY2Q8WXA3 655 aa13.34□□□□□ -0.27
POLR2A-209ENST00000617998 TRIM37O94972 964 aa13.34□□□□□ -0.27
POLR2A-209ENST00000617998 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
POLR2A-209ENST00000617998 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
POLR2A-209ENST00000617998 KDM6BO15054 1643 aa13.33□□□□□ -0.27
POLR2A-209ENST00000617998 RALYLQ86SE5 291 aaKnown RBP13.33□□□□□ -0.28
POLR2A-209ENST00000617998 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
POLR2A-209ENST00000617998 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■■□ 26.6
POLR2A-209ENST00000617998 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.28
POLR2A-209ENST00000617998 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
POLR2A-209ENST00000617998 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.28
POLR2A-209ENST00000617998 YEATS2Q9ULM3 1422 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 NME9Q86XW9 330 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
POLR2A-209ENST00000617998 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
POLR2A-209ENST00000617998 PDE4CQ08493 712 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 APAF1O14727 1248 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 CPLX1O14810 134 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
POLR2A-209ENST00000617998 MSL1Q68DK7 614 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
POLR2A-209ENST00000617998 ERC2O15083 957 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
POLR2A-209ENST00000617998 RFX1P22670 979 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 CA8P35219 290 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 EYA3Q99504 573 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 CEP126Q9P2H0 1117 aa13.31□□□□□ -0.28
POLR2A-209ENST00000617998 ARHGEF10O15013 1369 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 ATP10BO94823 1461 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 NRDCO43847 1150 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 KIF22Q14807 665 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
POLR2A-209ENST00000617998 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
POLR2A-209ENST00000617998 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 RRP12Q5JTH9 1297 aaKnown RBP13.3□□□□□ -0.28
POLR2A-209ENST00000617998 SCLT1Q96NL6 688 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 VEZTQ9HBM0 779 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 METTL24Q5JXM2 366 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
POLR2A-209ENST00000617998 USP5P45974 858 aa13.29□□□□□ -0.28
POLR2A-209ENST00000617998 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
POLR2A-209ENST00000617998 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
POLR2A-209ENST00000617998 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
POLR2A-209ENST00000617998 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
POLR2A-209ENST00000617998 AFF2P51816 1311 aa13.29□□□□□ -0.28
POLR2A-209ENST00000617998 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
POLR2A-209ENST00000617998 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
POLR2A-209ENST00000617998 MPHOSPH6Q99547 160 aaKnown RBP13.29□□□□□ -0.28
POLR2A-209ENST00000617998 ZFYVE16Q7Z3T8 1539 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
POLR2A-209ENST00000617998 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
POLR2A-209ENST00000617998 E9PSI1 815 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 HSPA1LP34931 641 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
POLR2A-209ENST00000617998 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 ZBTB3Q9H5J0 574 aa13.28□□□□□ -0.28
POLR2A-209ENST00000617998 TMEM94Q12767 1356 aa13.27□□□□□ -0.28
POLR2A-209ENST00000617998 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.28
POLR2A-209ENST00000617998 KIF16BQ96L93 1317 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
POLR2A-209ENST00000617998 NOS1P29475 1434 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 SPON1Q9HCB6 807 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 CABP5Q9NP86 173 aa13.27□□□□□ -0.29
POLR2A-209ENST00000617998 GNAI3P08754 354 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 ZNF287Q9HBT7 754 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 HSCBQ8IWL3 235 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms