RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 PDS5BQ9NTI5 1447 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 UBXN4Q92575 508 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 GDPD2Q9HCC8 539 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 CHRM1P11229 460 aaPredicted RBP8.82□□□□□ -1
PDE6A-205ENST00000617647 CAPN2P17655 700 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 FBLN2P98095 1184 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 LMBRD1Q9NUN5 540 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 TMEM63CQ9P1W3 806 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 CTNNA3Q9UI47 895 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 ABCA5Q8WWZ7 1642 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 MPHOSPH10O00566 681 aaKnown RBP8.82□□□□□ -1
PDE6A-205ENST00000617647 ATP6V1AP38606 617 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 HSP90B2PQ58FF3 399 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 RPAINQ86UA6 219 aa8.82□□□□□ -1
PDE6A-205ENST00000617647 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 MYO1CO00159 1063 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 GYS2P54840 703 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 NCBP1Q09161 790 aaKnown RBP8.81□□□□□ -1
PDE6A-205ENST00000617647 PKD2Q13563 968 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 ELF2Q15723 593 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 TDRD9Q8NDG6 1382 aaKnown RBP8.81□□□□□ -1
PDE6A-205ENST00000617647 SNAPC4Q5SXM2 1469 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 FAM212AQ96EL1 285 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 TRMT1Q9NXH9 659 aaKnown RBP8.81□□□□□ -1
PDE6A-205ENST00000617647 DHX29Q7Z478 1369 aaKnown RBP8.81□□□□□ -1
PDE6A-205ENST00000617647 FIBPO43427 364 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 PRR29P0C7W0 189 aa8.81□□□□□ -1
PDE6A-205ENST00000617647 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
PDE6A-205ENST00000617647 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
PDE6A-205ENST00000617647 ARHGEF11O15085 1522 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 PTGS1P23219 599 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
PDE6A-205ENST00000617647 CDC45O75419 566 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 TMED8Q6PL24 325 aaPredicted RBP8.8□□□□□ -1
PDE6A-205ENST00000617647 MICALL1Q8N3F8 863 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 RBM28Q9NW13 759 aaKnown RBP8.8□□□□□ -1
PDE6A-205ENST00000617647 BECN2A8MW95 431 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 TRIM66O15016 1216 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
PDE6A-205ENST00000617647 CDCA8Q53HL2 280 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 EHBP1L1Q8N3D4 1523 aa8.8□□□□□ -1
PDE6A-205ENST00000617647 CCDC186Q7Z3E2 898 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 DDX19BQ9UMR2 479 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 THOC2Q8NI27 1593 aaKnown RBP8.79□□□□□ -1
PDE6A-205ENST00000617647 CCDC183Q5T5S1 534 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 SLC52A1Q9NWF4 448 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 IVLP07476 585 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 ZNF853P0CG23 659 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 CCDC192P0DO97 292 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 CCDC27Q2M243 656 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
PDE6A-205ENST00000617647 ST7Q9NRC1 585 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 PYCARDQ9ULZ3 195 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
PDE6A-205ENST00000617647 MORC2Q9Y6X9 1032 aaPredicted RBP8.79□□□□□ -1
PDE6A-205ENST00000617647 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
PDE6A-205ENST00000617647 ANKRD7Q92527 254 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 RRP15Q9Y3B9 282 aaKnown RBP8.78□□□□□ -1
PDE6A-205ENST00000617647 ANKRD30AQ9BXX3 1397 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
PDE6A-205ENST00000617647 SLU7O95391 586 aaKnown RBP8.78□□□□□ -1
PDE6A-205ENST00000617647 TPM1P09493 284 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 NEK4P51957 841 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 SATB1Q01826 763 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 BIRC2Q13490 618 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 GCC2Q8IWJ2 1684 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 GPT2Q8TD30 523 aa8.78□□□□□ -1
PDE6A-205ENST00000617647 KDM4AO75164 1064 aa8.77□□□□□ -1
PDE6A-205ENST00000617647 PPM1EQ8WY54 764 aa8.77□□□□□ -1
PDE6A-205ENST00000617647 CCDC34Q96HJ3 373 aa8.77□□□□□ -1
PDE6A-205ENST00000617647 ATP6V1DQ9Y5K8 247 aa8.77□□□□□ -1
PDE6A-205ENST00000617647 ARID4AP29374 1257 aaPredicted RBP8.77□□□□□ -1.01
PDE6A-205ENST00000617647 SUFUQ9UMX1 484 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 GUCY2CP25092 1073 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 ACBD3Q9H3P7 528 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 CXorf56Q9H5V9 222 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 ZNF215Q9UL58 517 aaPredicted RBP8.77□□□□□ -1.01
PDE6A-205ENST00000617647 HFM1A2PYH4 1435 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 KIF2AO00139 706 aaPredicted RBP8.77□□□□□ -1.01
PDE6A-205ENST00000617647 NEBLO76041 1014 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 CHAMP1Q96JM3 812 aa8.77□□□□□ -1.01
PDE6A-205ENST00000617647 PTPN23Q9H3S7 1636 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 REC8O95072 547 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 MVPQ14764 893 aaKnown RBP8.76□□□□□ -1.01
PDE6A-205ENST00000617647 ARHGAP29Q52LW3 1261 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 ERO1AQ96HE7 468 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 POLR1AO95602 1720 aaPredicted RBP8.76□□□□□ -1.01
PDE6A-205ENST00000617647 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 PLEKHH1Q9ULM0 1364 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 GIMAP6Q6P9H5 292 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 GBP6Q6ZN66 633 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
PDE6A-205ENST00000617647 CENPHQ9H3R5 247 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
PDE6A-205ENST00000617647 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
PDE6A-205ENST00000617647 INTS3Q68E01 1043 aaKnown RBP8.76□□□□□ -1.01
PDE6A-205ENST00000617647 PROM2Q8N271 834 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms