RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 MORC1Q86VD1 984 aa22.34■■□□□ 1.17
SPTSSB-204ENST00000617024 PRDM11Q9NQV5 511 aa22.34■■□□□ 1.17
SPTSSB-204ENST00000617024 SLIT3O75094 1523 aa22.34■■□□□ 1.17
SPTSSB-204ENST00000617024 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
SPTSSB-204ENST00000617024 PHRF1Q9P1Y6 1649 aaKnown RBP22.33■■□□□ 1.17
SPTSSB-204ENST00000617024 ZBTB7CA1YPR0 619 aa22.33■■□□□ 1.17
SPTSSB-204ENST00000617024 CC2D1BQ5T0F9 858 aaKnown RBP22.33■■□□□ 1.17
SPTSSB-204ENST00000617024 CCDC9Q9Y3X0 531 aaKnown RBP22.33■■□□□ 1.17
SPTSSB-204ENST00000617024 USP54Q70EL1 1684 aa22.33■■□□□ 1.16
SPTSSB-204ENST00000617024 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
SPTSSB-204ENST00000617024 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
SPTSSB-204ENST00000617024 CPDO75976 1380 aa22.31■■□□□ 1.16
SPTSSB-204ENST00000617024 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
SPTSSB-204ENST00000617024 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
SPTSSB-204ENST00000617024 FBLN1P23142 703 aa22.3■■□□□ 1.16
SPTSSB-204ENST00000617024 CHRNA2Q15822 529 aa22.3■■□□□ 1.16
SPTSSB-204ENST00000617024 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
SPTSSB-204ENST00000617024 TNNT2P45379 298 aaPredicted RBP22.29■■□□□ 1.16
SPTSSB-204ENST00000617024 TNS1Q9HBL0 1735 aaKnown RBP22.28■■□□□ 1.16
SPTSSB-204ENST00000617024 BAG6P46379 1132 aa22.28■■□□□ 1.16
SPTSSB-204ENST00000617024 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
SPTSSB-204ENST00000617024 NFAT5O94916 1531 aa22.26■■□□□ 1.15
SPTSSB-204ENST00000617024 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
SPTSSB-204ENST00000617024 RRS1Q15050 365 aaKnown RBP22.26■■□□□ 1.15
SPTSSB-204ENST00000617024 FAM182BQ5T319 152 aa22.26■■□□□ 1.15
SPTSSB-204ENST00000617024 BTG4Q9NY30 223 aa22.26■■□□□ 1.15
SPTSSB-204ENST00000617024 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 COL14A1Q05707 1796 aaKnown RBP22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 A0A0G2JS52 829 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 AMPHP49418 695 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 MYT1Q01538 1121 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 THSD7AQ9UPZ6 1657 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 ANKRD26Q9UPS8 1709 aa22.25■■□□□ 1.15
SPTSSB-204ENST00000617024 EVA1CP58658 441 aa22.24■■□□□ 1.15
SPTSSB-204ENST00000617024 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
SPTSSB-204ENST00000617024 IP6K1Q92551 441 aa22.23■■□□□ 1.15
SPTSSB-204ENST00000617024 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
SPTSSB-204ENST00000617024 AXIN2Q9Y2T1 843 aa22.22■■□□□ 1.15
SPTSSB-204ENST00000617024 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
SPTSSB-204ENST00000617024 R3HDM1Q15032 1099 aaKnown RBP22.21■■□□□ 1.15
SPTSSB-204ENST00000617024 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
SPTSSB-204ENST00000617024 EMILIN1Q9Y6C2 1016 aa22.2■■□□□ 1.14
SPTSSB-204ENST00000617024 HOXC9P31274 260 aa22.19■■□□□ 1.14
SPTSSB-204ENST00000617024 STRN4Q9NRL3 753 aa22.19■■□□□ 1.14
SPTSSB-204ENST00000617024 SPATA31A5Q5VU36 1347 aa22.19■■□□□ 1.14
SPTSSB-204ENST00000617024 SPATA31A7Q8IWB4 1347 aa22.19■■□□□ 1.14
SPTSSB-204ENST00000617024 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
SPTSSB-204ENST00000617024 LTN1O94822 1766 aa22.18■■□□□ 1.14
SPTSSB-204ENST00000617024 KIF24Q5T7B8 1368 aa22.17■■□□□ 1.14
SPTSSB-204ENST00000617024 RALBP1Q15311 655 aa22.17■■□□□ 1.14
SPTSSB-204ENST00000617024 COL18A1P39060 1754 aa22.17■■□□□ 1.14
SPTSSB-204ENST00000617024 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
SPTSSB-204ENST00000617024 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
SPTSSB-204ENST00000617024 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
SPTSSB-204ENST00000617024 MTHFSP49914 203 aa22.15■■□□□ 1.14
SPTSSB-204ENST00000617024 FLT4P35916 1363 aa22.14■■□□□ 1.14
SPTSSB-204ENST00000617024 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.14
SPTSSB-204ENST00000617024 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
SPTSSB-204ENST00000617024 HSP90AB2PQ58FF8 381 aa22.14■■□□□ 1.13
SPTSSB-204ENST00000617024 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
SPTSSB-204ENST00000617024 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
SPTSSB-204ENST00000617024 ABCC6O95255 1503 aa22.14■■□□□ 1.13
SPTSSB-204ENST00000617024 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 LARP1Q6PKG0 1096 aaKnown RBP22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 CAMKK2Q96RR4 588 aa22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 RGPD5Q99666 1765 aa22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 INSRP06213 1382 aa22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 PARD3Q8TEW0 1356 aa22.12■■□□□ 1.13
SPTSSB-204ENST00000617024 RREB1Q92766 1687 aa22.11■■□□□ 1.13
SPTSSB-204ENST00000617024 COL5A2P05997 1499 aaPredicted RBP22.11■■□□□ 1.13
SPTSSB-204ENST00000617024 TOM1L2Q6ZVM7 507 aa22.11■■□□□ 1.13
SPTSSB-204ENST00000617024 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
SPTSSB-204ENST00000617024 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
SPTSSB-204ENST00000617024 ERBB3P21860 1342 aa22.09■■□□□ 1.13
SPTSSB-204ENST00000617024 NUP188Q5SRE5 1749 aa22.09■■□□□ 1.13
SPTSSB-204ENST00000617024 PEAK1Q9H792 1746 aa22.09■■□□□ 1.13
SPTSSB-204ENST00000617024 SPATA31A1Q5TZJ5 1347 aa22.08■■□□□ 1.13
SPTSSB-204ENST00000617024 ANP32CO43423 234 aa22.08■■□□□ 1.13
SPTSSB-204ENST00000617024 TRIM37O94972 964 aa22.08■■□□□ 1.13
SPTSSB-204ENST00000617024 NLRP2Q9NX02 1062 aa22.08■■□□□ 1.13
SPTSSB-204ENST00000617024 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
SPTSSB-204ENST00000617024 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
SPTSSB-204ENST00000617024 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
SPTSSB-204ENST00000617024 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
SPTSSB-204ENST00000617024 CRB1P82279 1406 aa22.06■■□□□ 1.12
SPTSSB-204ENST00000617024 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
SPTSSB-204ENST00000617024 MYBBP1AQ9BQG0 1328 aaKnown RBP22.05■■□□□ 1.12
SPTSSB-204ENST00000617024 TCP11L2Q8N4U5 519 aa22.04■■□□□ 1.12
SPTSSB-204ENST00000617024 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
SPTSSB-204ENST00000617024 FAM196AQ6ZSG2 479 aa22.03■■□□□ 1.12
SPTSSB-204ENST00000617024 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
SPTSSB-204ENST00000617024 APBA3O96018 575 aa22.02■■□□□ 1.12
SPTSSB-204ENST00000617024 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
SPTSSB-204ENST00000617024 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
SPTSSB-204ENST00000617024 IL13P35225 146 aa22■■□□□ 1.11
SPTSSB-204ENST00000617024 BARGINQ6ZT62 677 aa22■■□□□ 1.11
SPTSSB-204ENST00000617024 EYA1Q99502 592 aa22■■□□□ 1.11
SPTSSB-204ENST00000617024 UTRNP46939 3433 aa21.99■■□□□ 1.11
SPTSSB-204ENST00000617024 DIEXFQ68CQ4 756 aaKnown RBP21.98■■□□□ 1.11
SPTSSB-204ENST00000617024 YY1P25490 414 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms