RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
AP003900.1-202ENST00000616952 YBX3P16989 372 aaKnown RBP eCLIP16■□□□□ 0.15
AP003900.1-202ENST00000616952 PCNTO95613 3336 aa16■□□□□ 0.15
AP003900.1-202ENST00000616952 KIAA0232Q92628 1395 aa16■□□□□ 0.15
AP003900.1-202ENST00000616952 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
AP003900.1-202ENST00000616952 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
AP003900.1-202ENST00000616952 DHX57Q6P158 1386 aaKnown RBP15.99■□□□□ 0.15
AP003900.1-202ENST00000616952 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
AP003900.1-202ENST00000616952 JMYQ8N9B5 988 aa15.98■□□□□ 0.15
AP003900.1-202ENST00000616952 NLGN2Q8NFZ4 835 aa15.98■□□□□ 0.15
AP003900.1-202ENST00000616952 WWC3Q9ULE0 1092 aa15.98■□□□□ 0.15
AP003900.1-202ENST00000616952 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
AP003900.1-202ENST00000616952 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
AP003900.1-202ENST00000616952 PTF1AQ7RTS3 328 aa15.97■□□□□ 0.15
AP003900.1-202ENST00000616952 TCP11L2Q8N4U5 519 aa15.97■□□□□ 0.15
AP003900.1-202ENST00000616952 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
AP003900.1-202ENST00000616952 NUP155O75694 1391 aa15.97■□□□□ 0.15
AP003900.1-202ENST00000616952 KIF3CO14782 793 aa15.96■□□□□ 0.15
AP003900.1-202ENST00000616952 TXNRD1Q16881 649 aa15.96■□□□□ 0.15
AP003900.1-202ENST00000616952 ATP7BP35670 1465 aa15.96■□□□□ 0.14
AP003900.1-202ENST00000616952 SBF2Q86WG5 1849 aa15.96■□□□□ 0.14
AP003900.1-202ENST00000616952 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
AP003900.1-202ENST00000616952 WDR90Q96KV7 1748 aa15.95■□□□□ 0.14
AP003900.1-202ENST00000616952 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
AP003900.1-202ENST00000616952 KLRG1Q96E93 195 aa15.95■□□□□ 0.14
AP003900.1-202ENST00000616952 STK26Q9P289 416 aa15.95■□□□□ 0.14
AP003900.1-202ENST00000616952 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
AP003900.1-202ENST00000616952 TOPAZ1Q8N9V7 1692 aa15.92■□□□□ 0.14
AP003900.1-202ENST00000616952 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
AP003900.1-202ENST00000616952 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
AP003900.1-202ENST00000616952 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
AP003900.1-202ENST00000616952 KIF1BO60333 1816 aa15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 GABBR2O75899 941 aa15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 EVA1CP58658 441 aa15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
AP003900.1-202ENST00000616952 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
AP003900.1-202ENST00000616952 POLD1P28340 1107 aa15.9■□□□□ 0.14
AP003900.1-202ENST00000616952 PHRF1Q9P1Y6 1649 aaKnown RBP15.9■□□□□ 0.14
AP003900.1-202ENST00000616952 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
AP003900.1-202ENST00000616952 RPGRIP1LQ68CZ1 1315 aa15.87■□□□□ 0.13
AP003900.1-202ENST00000616952 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
AP003900.1-202ENST00000616952 PPLO60437 1756 aa15.87■□□□□ 0.13
AP003900.1-202ENST00000616952 BCL9O00512 1426 aa15.86■□□□□ 0.13
AP003900.1-202ENST00000616952 TOMM70O94826 608 aa15.86■□□□□ 0.13
AP003900.1-202ENST00000616952 HTRA3P83110 453 aa15.86■□□□□ 0.13
AP003900.1-202ENST00000616952 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
AP003900.1-202ENST00000616952 COL24A1Q17RW2 1714 aa15.85■□□□□ 0.13
AP003900.1-202ENST00000616952 ZC3H6P61129 1189 aaKnown RBP15.85■□□□□ 0.13
AP003900.1-202ENST00000616952 LMO7Q8WWI1 1683 aa15.85■□□□□ 0.13
AP003900.1-202ENST00000616952 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
AP003900.1-202ENST00000616952 DDB1Q16531 1140 aa15.83■□□□□ 0.12
AP003900.1-202ENST00000616952 ZNF827Q17R98 1081 aa15.83■□□□□ 0.12
AP003900.1-202ENST00000616952 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
AP003900.1-202ENST00000616952 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
AP003900.1-202ENST00000616952 YTHDC2Q9H6S0 1430 aaKnown RBP15.82■□□□□ 0.12
AP003900.1-202ENST00000616952 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 COL5A2P05997 1499 aaPredicted RBP15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 CRB1P82279 1406 aa15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 CLCN6P51797 869 aa15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
AP003900.1-202ENST00000616952 ROCK1Q13464 1354 aa15.79■□□□□ 0.12
AP003900.1-202ENST00000616952 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
AP003900.1-202ENST00000616952 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
AP003900.1-202ENST00000616952 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
AP003900.1-202ENST00000616952 FAM161AQ3B820 660 aa15.78■□□□□ 0.12
AP003900.1-202ENST00000616952 ADGRF5Q8IZF2 1346 aa15.77■□□□□ 0.12
AP003900.1-202ENST00000616952 SIRT1Q96EB6 747 aa15.77■□□□□ 0.12
AP003900.1-202ENST00000616952 AKAP12Q02952 1782 aa15.77■□□□□ 0.11
AP003900.1-202ENST00000616952 CPDO75976 1380 aa15.76■□□□□ 0.11
AP003900.1-202ENST00000616952 QSER1Q2KHR3 1735 aa15.76■□□□□ 0.11
AP003900.1-202ENST00000616952 PNPLA7Q6ZV29 1317 aa15.74■□□□□ 0.11
AP003900.1-202ENST00000616952 ANKRD30BQ9BXX2 1392 aa15.74■□□□□ 0.11
AP003900.1-202ENST00000616952 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
AP003900.1-202ENST00000616952 SAFB2Q14151 953 aaKnown RBP eCLIP15.73■□□□□ 0.113e-6■■■□□ 17.1
AP003900.1-202ENST00000616952 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
AP003900.1-202ENST00000616952 RBM46Q8TBY0 533 aaKnown RBP15.73■□□□□ 0.11
AP003900.1-202ENST00000616952 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
AP003900.1-202ENST00000616952 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
AP003900.1-202ENST00000616952 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
AP003900.1-202ENST00000616952 PIK3C2GO75747 1445 aa15.71■□□□□ 0.11
AP003900.1-202ENST00000616952 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
AP003900.1-202ENST00000616952 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
AP003900.1-202ENST00000616952 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
AP003900.1-202ENST00000616952 PRAM1Q96QH2 718 aa15.7■□□□□ 0.1
AP003900.1-202ENST00000616952 BRD4O60885 1362 aaPredicted RBP15.7■□□□□ 0.1
AP003900.1-202ENST00000616952 NMRK2Q9NPI5 230 aa15.69■□□□□ 0.1
AP003900.1-202ENST00000616952 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
AP003900.1-202ENST00000616952 FSTL1Q12841 308 aa15.68■□□□□ 0.1
AP003900.1-202ENST00000616952 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
AP003900.1-202ENST00000616952 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
AP003900.1-202ENST00000616952 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
AP003900.1-202ENST00000616952 CDCA7Q9BWT1 371 aaPredicted RBP15.66■□□□□ 0.1
AP003900.1-202ENST00000616952 USP19O94966 1318 aa15.66■□□□□ 0.1
AP003900.1-202ENST00000616952 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
AP003900.1-202ENST00000616952 TFCP2L1Q9NZI6 479 aa15.65■□□□□ 0.1
AP003900.1-202ENST00000616952 TOM1L2Q6ZVM7 507 aa15.64■□□□□ 0.09
AP003900.1-202ENST00000616952 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms