RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 FAM193AP78312 1265 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 GPT2Q8TD30 523 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3B-205ENST00000616288 TRIM27P14373 513 aa16.09■□□□□ 0.17
PPP4R3B-205ENST00000616288 TERF2Q15554 542 aa16.09■□□□□ 0.17
PPP4R3B-205ENST00000616288 CCDC34Q96HJ3 373 aa16.09■□□□□ 0.17
PPP4R3B-205ENST00000616288 USP8P40818 1118 aa16.08■□□□□ 0.17
PPP4R3B-205ENST00000616288 FOSBP53539 338 aa16.08■□□□□ 0.17
PPP4R3B-205ENST00000616288 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.17
PPP4R3B-205ENST00000616288 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.17
PPP4R3B-205ENST00000616288 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.17
PPP4R3B-205ENST00000616288 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 FERMT3Q86UX7 667 aa16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 SLU7O95391 586 aaKnown RBP16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 CENPHQ9H3R5 247 aa16.08■□□□□ 0.16
PPP4R3B-205ENST00000616288 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 PYCARDQ9ULZ3 195 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 MTHFSP49914 203 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 ARHGAP29Q52LW3 1261 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 AXDND1Q5T1B0 1012 aaPredicted RBP16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 ACBD3Q9H3P7 528 aa16.07■□□□□ 0.16
PPP4R3B-205ENST00000616288 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3B-205ENST00000616288 A0A1B0GUL7 405 aa16.06■□□□□ 0.16
PPP4R3B-205ENST00000616288 TMX3Q96JJ7 454 aa16.06■□□□□ 0.16
PPP4R3B-205ENST00000616288 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
PPP4R3B-205ENST00000616288 CAPN2P17655 700 aa16.05■□□□□ 0.16
PPP4R3B-205ENST00000616288 MX1P20591 662 aa16.05■□□□□ 0.16
PPP4R3B-205ENST00000616288 FYCO1Q9BQS8 1478 aa16.05■□□□□ 0.16
PPP4R3B-205ENST00000616288 PDILTQ8N807 584 aa16.05■□□□□ 0.16
PPP4R3B-205ENST00000616288 SKILP12757 684 aa16.05■□□□□ 0.16
PPP4R3B-205ENST00000616288 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 CCDC73Q6ZRK6 1079 aa16.04■□□□□ 0.16
PPP4R3B-205ENST00000616288 NUCB1Q02818 461 aa16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 EIF3JO75822 258 aaKnown RBP16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 CCDC91Q7Z6B0 441 aa16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 KRT85P78386 507 aa16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 KIF2AO00139 706 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3B-205ENST00000616288 LRMPQ12912 555 aa16.02■□□□□ 0.16
PPP4R3B-205ENST00000616288 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
PPP4R3B-205ENST00000616288 E2F4Q16254 413 aa16.02■□□□□ 0.16
PPP4R3B-205ENST00000616288 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.16
PPP4R3B-205ENST00000616288 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
PPP4R3B-205ENST00000616288 ZNF165P49910 485 aa16.02■□□□□ 0.15
PPP4R3B-205ENST00000616288 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.15
PPP4R3B-205ENST00000616288 UBE2HP62256 183 aa16.02■□□□□ 0.15
PPP4R3B-205ENST00000616288 MCM6Q14566 821 aa16.02■□□□□ 0.15
PPP4R3B-205ENST00000616288 LUZP1Q86V48 1076 aa16.02■□□□□ 0.15
PPP4R3B-205ENST00000616288 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
PPP4R3B-205ENST00000616288 CNPY4Q8N129 248 aa16.01■□□□□ 0.15
PPP4R3B-205ENST00000616288 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
PPP4R3B-205ENST00000616288 BLMP54132 1417 aaPredicted RBP16.01■□□□□ 0.15
PPP4R3B-205ENST00000616288 ABCF1Q8NE71 845 aaKnown RBP eCLIP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 EFCC1Q9HA90 598 aa16■□□□□ 0.15
PPP4R3B-205ENST00000616288 HNRNPMP52272 730 aaKnown RBP eCLIP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 ERO1AQ96HE7 468 aa16■□□□□ 0.15
PPP4R3B-205ENST00000616288 FAM200AQ8TCP9 573 aa16■□□□□ 0.15
PPP4R3B-205ENST00000616288 DDX41Q9UJV9 622 aaKnown RBP16■□□□□ 0.15
PPP4R3B-205ENST00000616288 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 KIAA0754O94854 1291 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 RAD51AP2Q09MP3 1159 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 SFPQP23246 707 aaKnown RBP eCLIP15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 CASQ1P31415 396 aa15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 NAT10Q9H0A0 1025 aaKnown RBP15.99■□□□□ 0.15
PPP4R3B-205ENST00000616288 KINO60870 393 aaKnown RBP15.98■□□□□ 0.15
PPP4R3B-205ENST00000616288 PHACTR2O75167 634 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms