RNA–Protein interactions for RNA: ENST00000616220.1

Metazoa_SRP.29-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 280 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.29-201ENST00000616220 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 PPM1GO15355 546 aaPredicted RBP11.29□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 GCP02774 474 aa11.29□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 XPCQ01831 940 aaPredicted RBP11.29□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 KDRP35968 1356 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 HOXC9P31274 260 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 ARHGEF25Q86VW2 580 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 FBXO41Q8TF61 875 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 IP6K1Q92551 441 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 PHF23Q9BUL5 403 aaPredicted RBP11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 CPDO75976 1380 aa11.28□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 NCAPD2Q15021 1401 aa11.27□□□□□ -0.6
Metazoa_SRP.29-201ENST00000616220 APAF1O14727 1248 aa11.27□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 AMPHP49418 695 aa11.27□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 DDX17Q92841 729 aaKnown RBP11.27□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 TCP11L2Q8N4U5 519 aa11.26□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 COL14A1Q05707 1796 aaKnown RBP11.25□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 SOX12O15370 315 aa11.24□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 TOM1O60784 492 aa11.24□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 CACNA1FO60840 1977 aa11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 LRRC59Q96AG4 307 aaKnown RBP11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 LRRC37A3O60309 1634 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 NEFMP07197 916 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 PRKAR2BP31323 418 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 EYA1Q99502 592 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 NWD2Q9ULI1 1742 aa11.22□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 PLCH1Q4KWH8 1693 aa11.21□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
Metazoa_SRP.29-201ENST00000616220 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 IL16Q14005 1332 aa11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 HMOX1P09601 288 aa11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 ERBB3P21860 1342 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 E9PSI1 815 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 AEBP1Q8IUX7 1158 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 ZC3H6P61129 1189 aaKnown RBP11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 AXIN2Q9Y2T1 843 aa11.18□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 RIPK4P57078 832 aa11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 ANKRD24Q8TF21 1146 aa11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 RNF123Q5XPI4 1314 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 CALD1Q05682 793 aaKnown RBP11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 KDM3BQ7LBC6 1761 aa11.16□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
Metazoa_SRP.29-201ENST00000616220 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 CT47B1P0C2W7 299 aaPredicted RBP11.12□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
Metazoa_SRP.29-201ENST00000616220 CHRNA2Q15822 529 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms