RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 FOXD4L3Q6VB84 417 aaPredicted RBP10.71□□□□□ -0.69
PCDH15-229ENST00000616114 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
PCDH15-229ENST00000616114 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.7
PCDH15-229ENST00000616114 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.7
PCDH15-229ENST00000616114 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.7
PCDH15-229ENST00000616114 TRIM27P14373 513 aa10.71□□□□□ -0.7
PCDH15-229ENST00000616114 RRS1Q15050 365 aaKnown RBP10.7□□□□□ -0.7
PCDH15-229ENST00000616114 IL27Q8NEV9 243 aa10.7□□□□□ -0.7
PCDH15-229ENST00000616114 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
PCDH15-229ENST00000616114 PTPRCP08575 1304 aa10.7□□□□□ -0.7
PCDH15-229ENST00000616114 WDR33Q9C0J8 1336 aaKnown RBP10.7□□□□□ -0.7
PCDH15-229ENST00000616114 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 BICD2Q8TD16 824 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 CAVIN1Q6NZI2 390 aaKnown RBP10.69□□□□□ -0.7
PCDH15-229ENST00000616114 SASS6Q6UVJ0 657 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 GRPEL1Q9HAV7 217 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 EVA1CP58658 441 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 TRDNQ13061 729 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 TTC21BQ7Z4L5 1316 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 PRPF40AO75400 957 aaKnown RBP10.69□□□□□ -0.7
PCDH15-229ENST00000616114 ATF3P18847 181 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 TRIM29Q14134 588 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 FSD1Q9BTV5 496 aa10.69□□□□□ -0.7
PCDH15-229ENST00000616114 GNAT3A8MTJ3 354 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 CPLX1O14810 134 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 IGHDP01880 384 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 ANKRD1Q15327 319 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 NUTM2GQ5VZR2 741 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 TBC1D32Q96NH3 1257 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 RAB11FIP3O75154 756 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
PCDH15-229ENST00000616114 BLMP54132 1417 aaPredicted RBP10.68□□□□□ -0.7
PCDH15-229ENST00000616114 CCDC73Q6ZRK6 1079 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 TOMM22Q9NS69 142 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 HOOK1Q9UJC3 728 aaKnown RBP10.68□□□□□ -0.7
PCDH15-229ENST00000616114 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
PCDH15-229ENST00000616114 NLRP2Q9NX02 1062 aa10.68□□□□□ -0.7
PCDH15-229ENST00000616114 TPM2P07951 284 aa10.67□□□□□ -0.7
PCDH15-229ENST00000616114 ZSCAN31Q96LW9 406 aaPredicted RBP10.67□□□□□ -0.7
PCDH15-229ENST00000616114 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
PCDH15-229ENST00000616114 MTERF4Q7Z6M4 381 aaKnown RBP10.67□□□□□ -0.7
PCDH15-229ENST00000616114 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
PCDH15-229ENST00000616114 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
PCDH15-229ENST00000616114 ESCO1Q5FWF5 840 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 NME9Q86XW9 330 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 CEP170Q5SW79 1584 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 MAP7D2Q96T17 732 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
PCDH15-229ENST00000616114 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
PCDH15-229ENST00000616114 CCDC9Q9Y3X0 531 aaKnown RBP10.66□□□□□ -0.7
PCDH15-229ENST00000616114 ZFYVE9O95405 1425 aa10.65□□□□□ -0.7
PCDH15-229ENST00000616114 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
PCDH15-229ENST00000616114 NAT10Q9H0A0 1025 aaKnown RBP10.65□□□□□ -0.7
PCDH15-229ENST00000616114 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
PCDH15-229ENST00000616114 SKAP1Q86WV1 359 aa10.65□□□□□ -0.71
PCDH15-229ENST00000616114 NUCB1Q02818 461 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
PCDH15-229ENST00000616114 FYB1O15117 783 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 RALYLQ86SE5 291 aaKnown RBP10.64□□□□□ -0.71
PCDH15-229ENST00000616114 NEUROD6Q96NK8 337 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 MX1P20591 662 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
PCDH15-229ENST00000616114 TPM1P09493 284 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 GTF2E1P29083 439 aaPredicted RBP10.63□□□□□ -0.71
PCDH15-229ENST00000616114 TAF7Q15545 349 aaPredicted RBP10.63□□□□□ -0.71
PCDH15-229ENST00000616114 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 SRGAP3O43295 1099 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 ABCA8O94911 1581 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 FBXO31Q5XUX0 539 aaPredicted RBP10.63□□□□□ -0.71
PCDH15-229ENST00000616114 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 KDM5CP41229 1560 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 MCM10Q7L590 875 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 SLC26A8Q96RN1 970 aa10.63□□□□□ -0.71
PCDH15-229ENST00000616114 ZNF396Q96N95 335 aaPredicted RBP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 CARD14Q9BXL6 1004 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 TMX4Q9H1E5 349 aaPredicted RBP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 APPP05067 770 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 DHX8Q14562 1220 aaKnown RBP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 SAFBQ15424 915 aaKnown RBP eCLIP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 PCDHB15Q9Y5E8 787 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 KRT32Q14532 448 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 ERICH2A1L162 156 aa10.62□□□□□ -0.71
PCDH15-229ENST00000616114 TPD52L1Q16890 204 aaPredicted RBP10.62□□□□□ -0.71
PCDH15-229ENST00000616114 AMOTQ4VCS5 1084 aa10.61□□□□□ -0.71
PCDH15-229ENST00000616114 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
PCDH15-229ENST00000616114 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
PCDH15-229ENST00000616114 KDM6BO15054 1643 aa10.61□□□□□ -0.71
PCDH15-229ENST00000616114 HMGN5P82970 282 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms