RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 HPS1Q92902 700 aa10.75□□□□□ -0.69
SCAMP1-205ENST00000614488 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
SCAMP1-205ENST00000614488 WWC1Q8IX03 1113 aa10.74□□□□□ -0.69
SCAMP1-205ENST00000614488 POM121Q96HA1 1249 aa10.74□□□□□ -0.69
SCAMP1-205ENST00000614488 KCTD15Q96SI1 283 aaPredicted RBP10.74□□□□□ -0.69
SCAMP1-205ENST00000614488 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
SCAMP1-205ENST00000614488 LCE2BO14633 110 aa10.72□□□□□ -0.69
SCAMP1-205ENST00000614488 ESPNB1AK53 854 aa10.71□□□□□ -0.69
SCAMP1-205ENST00000614488 NR3C2P08235 984 aa10.71□□□□□ -0.69
SCAMP1-205ENST00000614488 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
SCAMP1-205ENST00000614488 AXIN1O15169 862 aa10.7□□□□□ -0.7
SCAMP1-205ENST00000614488 INTS6LQ5JSJ4 861 aaKnown RBP10.7□□□□□ -0.7
SCAMP1-205ENST00000614488 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
SCAMP1-205ENST00000614488 CCDC116Q8IYX3 515 aa10.7□□□□□ -0.7
SCAMP1-205ENST00000614488 DHX9Q08211 1270 aaKnown RBP10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 VAC14Q08AM6 782 aa10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 KLF16Q9BXK1 252 aaPredicted RBP10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 GTF3C3Q9Y5Q9 886 aa10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 EMILIN1Q9Y6C2 1016 aa10.69□□□□□ -0.7
SCAMP1-205ENST00000614488 TIMP2P16035 220 aa10.68□□□□□ -0.7
SCAMP1-205ENST00000614488 SOX11P35716 441 aa10.68□□□□□ -0.7
SCAMP1-205ENST00000614488 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
SCAMP1-205ENST00000614488 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
SCAMP1-205ENST00000614488 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
SCAMP1-205ENST00000614488 CLUAP1Q96AJ1 413 aa10.67□□□□□ -0.7
SCAMP1-205ENST00000614488 A6NJR5 290 aa10.66□□□□□ -0.7
SCAMP1-205ENST00000614488 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
SCAMP1-205ENST00000614488 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
SCAMP1-205ENST00000614488 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-205ENST00000614488 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-205ENST00000614488 RNF20Q5VTR2 975 aa10.65□□□□□ -0.7
SCAMP1-205ENST00000614488 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
SCAMP1-205ENST00000614488 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
SCAMP1-205ENST00000614488 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
SCAMP1-205ENST00000614488 FNBP4Q8N3X1 1017 aaPredicted RBP10.63□□□□□ -0.71
SCAMP1-205ENST00000614488 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
SCAMP1-205ENST00000614488 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
SCAMP1-205ENST00000614488 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
SCAMP1-205ENST00000614488 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
SCAMP1-205ENST00000614488 RAB15P59190 212 aa10.61□□□□□ -0.71
SCAMP1-205ENST00000614488 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
SCAMP1-205ENST00000614488 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
SCAMP1-205ENST00000614488 MEIOBQ8N635 442 aa10.59□□□□□ -0.71
SCAMP1-205ENST00000614488 ALG2Q9H553 416 aa10.59□□□□□ -0.71
SCAMP1-205ENST00000614488 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
SCAMP1-205ENST00000614488 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.72
SCAMP1-205ENST00000614488 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
SCAMP1-205ENST00000614488 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
SCAMP1-205ENST00000614488 SLFNL1Q499Z3 407 aa10.57□□□□□ -0.72
SCAMP1-205ENST00000614488 Q6ZVU0 165 aa10.57□□□□□ -0.72
SCAMP1-205ENST00000614488 PHTF2Q8N3S3 785 aa10.57□□□□□ -0.72
SCAMP1-205ENST00000614488 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
SCAMP1-205ENST00000614488 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
SCAMP1-205ENST00000614488 LILRA1O75019 489 aa10.55□□□□□ -0.72
SCAMP1-205ENST00000614488 BMP1P13497 986 aa10.55□□□□□ -0.72
SCAMP1-205ENST00000614488 RNF135Q8IUD6 432 aa10.55□□□□□ -0.72
SCAMP1-205ENST00000614488 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
SCAMP1-205ENST00000614488 PCDHB11Q9Y5F2 797 aa10.55□□□□□ -0.72
SCAMP1-205ENST00000614488 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
SCAMP1-205ENST00000614488 SCARF1Q14162 830 aa10.54□□□□□ -0.72
SCAMP1-205ENST00000614488 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
SCAMP1-205ENST00000614488 UPP2O95045 317 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 CBLBQ13191 982 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 ADAMTS19Q8TE59 1207 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
SCAMP1-205ENST00000614488 TRAK2O60296 914 aa10.52□□□□□ -0.73
SCAMP1-205ENST00000614488 GMPR2Q9P2T1 348 aaKnown RBP10.52□□□□□ -0.73
SCAMP1-205ENST00000614488 ADH1AP07327 375 aa10.51□□□□□ -0.73
SCAMP1-205ENST00000614488 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
SCAMP1-205ENST00000614488 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
SCAMP1-205ENST00000614488 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
SCAMP1-205ENST00000614488 DOLKQ9UPQ8 538 aa10.51□□□□□ -0.73
SCAMP1-205ENST00000614488 ADD1P35611 737 aaKnown RBP10.5□□□□□ -0.73
SCAMP1-205ENST00000614488 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
SCAMP1-205ENST00000614488 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
SCAMP1-205ENST00000614488 PLPP7Q8NBV4 271 aa10.49□□□□□ -0.73
SCAMP1-205ENST00000614488 GLMNQ92990 594 aa10.49□□□□□ -0.73
SCAMP1-205ENST00000614488 ZFP42Q96MM3 310 aa10.49□□□□□ -0.73
SCAMP1-205ENST00000614488 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
SCAMP1-205ENST00000614488 SCTRP47872 440 aa10.48□□□□□ -0.73
SCAMP1-205ENST00000614488 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
SCAMP1-205ENST00000614488 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 MYCP01106 439 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 BMP2P12643 396 aa10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 C6orf118Q5T5N4 469 aa10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 CYP2U1Q7Z449 544 aa10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
SCAMP1-205ENST00000614488 POTECB2RU33 542 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 C11orf95C9JLR9 678 aaPredicted RBP10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 SPINT1O43278 529 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 PTGIRP43119 386 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 TSGA10IPQ3SY00 556 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 SIRT1Q96EB6 747 aa10.46□□□□□ -0.73
SCAMP1-205ENST00000614488 AGBL1Q96MI9 1066 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms