RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 DDX10Q13206 875 aaKnown RBP17.69■□□□□ 0.42
SRGAP2C-204ENST00000613462 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
SRGAP2C-204ENST00000613462 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
SRGAP2C-204ENST00000613462 BLMP54132 1417 aaPredicted RBP17.67■□□□□ 0.42
SRGAP2C-204ENST00000613462 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
SRGAP2C-204ENST00000613462 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
SRGAP2C-204ENST00000613462 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
SRGAP2C-204ENST00000613462 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
SRGAP2C-204ENST00000613462 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
SRGAP2C-204ENST00000613462 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
SRGAP2C-204ENST00000613462 BTG4Q9NY30 223 aa17.65■□□□□ 0.42
SRGAP2C-204ENST00000613462 USP21Q9UK80 565 aa17.65■□□□□ 0.42
SRGAP2C-204ENST00000613462 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
SRGAP2C-204ENST00000613462 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
SRGAP2C-204ENST00000613462 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
SRGAP2C-204ENST00000613462 FLT4P35916 1363 aa17.64■□□□□ 0.41
SRGAP2C-204ENST00000613462 ZBTB7CA1YPR0 619 aa17.63■□□□□ 0.41
SRGAP2C-204ENST00000613462 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
SRGAP2C-204ENST00000613462 QTRT2Q9H974 415 aaKnown RBP17.63■□□□□ 0.41
SRGAP2C-204ENST00000613462 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
SRGAP2C-204ENST00000613462 ATRNO75882 1429 aa17.63■□□□□ 0.41
SRGAP2C-204ENST00000613462 AMPHP49418 695 aa17.62■□□□□ 0.41
SRGAP2C-204ENST00000613462 IP6K1Q92551 441 aa17.62■□□□□ 0.41
SRGAP2C-204ENST00000613462 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
SRGAP2C-204ENST00000613462 TRPC5Q9UL62 973 aaPredicted RBP17.61■□□□□ 0.41
SRGAP2C-204ENST00000613462 HOXC9P31274 260 aa17.6■□□□□ 0.41
SRGAP2C-204ENST00000613462 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
SRGAP2C-204ENST00000613462 RGPD2P0DJD1 1756 aa17.6■□□□□ 0.41
SRGAP2C-204ENST00000613462 INSRP06213 1382 aa17.59■□□□□ 0.41
SRGAP2C-204ENST00000613462 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
SRGAP2C-204ENST00000613462 EVA1CP58658 441 aa17.59■□□□□ 0.41
SRGAP2C-204ENST00000613462 VPS72Q15906 364 aa17.59■□□□□ 0.41
SRGAP2C-204ENST00000613462 CRB1P82279 1406 aa17.58■□□□□ 0.41
SRGAP2C-204ENST00000613462 ERBB3P21860 1342 aa17.58■□□□□ 0.4
SRGAP2C-204ENST00000613462 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
SRGAP2C-204ENST00000613462 GLI3P10071 1580 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 FBLN1P23142 703 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
SRGAP2C-204ENST00000613462 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
SRGAP2C-204ENST00000613462 STRN4Q9NRL3 753 aa17.56■□□□□ 0.4
SRGAP2C-204ENST00000613462 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
SRGAP2C-204ENST00000613462 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
SRGAP2C-204ENST00000613462 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
SRGAP2C-204ENST00000613462 THSD7AQ9UPZ6 1657 aa17.53■□□□□ 0.4
SRGAP2C-204ENST00000613462 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
SRGAP2C-204ENST00000613462 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
SRGAP2C-204ENST00000613462 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
SRGAP2C-204ENST00000613462 MTHFSP49914 203 aa17.52■□□□□ 0.4
SRGAP2C-204ENST00000613462 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
SRGAP2C-204ENST00000613462 THRAP3Q9Y2W1 955 aaKnown RBP17.52■□□□□ 0.4
SRGAP2C-204ENST00000613462 PPP2R1AP30153 589 aa17.51■□□□□ 0.39
SRGAP2C-204ENST00000613462 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
SRGAP2C-204ENST00000613462 BRWD3Q6RI45 1802 aa17.5■□□□□ 0.39
SRGAP2C-204ENST00000613462 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
SRGAP2C-204ENST00000613462 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
SRGAP2C-204ENST00000613462 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
SRGAP2C-204ENST00000613462 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
SRGAP2C-204ENST00000613462 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
SRGAP2C-204ENST00000613462 PRKRIP1Q9H875 184 aaPredicted RBP17.49■□□□□ 0.39
SRGAP2C-204ENST00000613462 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
SRGAP2C-204ENST00000613462 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
SRGAP2C-204ENST00000613462 LRRC37A3O60309 1634 aa17.48■□□□□ 0.39
SRGAP2C-204ENST00000613462 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
SRGAP2C-204ENST00000613462 CDCA7Q9BWT1 371 aaPredicted RBP17.47■□□□□ 0.39
SRGAP2C-204ENST00000613462 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
SRGAP2C-204ENST00000613462 ANP32CO43423 234 aa17.46■□□□□ 0.39
SRGAP2C-204ENST00000613462 ONECUT3O60422 494 aaPredicted RBP17.46■□□□□ 0.39
SRGAP2C-204ENST00000613462 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
SRGAP2C-204ENST00000613462 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
SRGAP2C-204ENST00000613462 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
SRGAP2C-204ENST00000613462 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
SRGAP2C-204ENST00000613462 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
SRGAP2C-204ENST00000613462 FAM98CQ17RN3 349 aaKnown RBP17.44■□□□□ 0.38
SRGAP2C-204ENST00000613462 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
SRGAP2C-204ENST00000613462 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
SRGAP2C-204ENST00000613462 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
SRGAP2C-204ENST00000613462 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
SRGAP2C-204ENST00000613462 IL13P35225 146 aa17.42■□□□□ 0.38
SRGAP2C-204ENST00000613462 LRP5O75197 1615 aa17.42■□□□□ 0.38
SRGAP2C-204ENST00000613462 A0A0G2JS52 829 aa17.41■□□□□ 0.38
SRGAP2C-204ENST00000613462 IL2RBP14784 551 aa17.41■□□□□ 0.38
SRGAP2C-204ENST00000613462 MYT1Q01538 1121 aa17.41■□□□□ 0.38
SRGAP2C-204ENST00000613462 EYA1Q99502 592 aa17.41■□□□□ 0.38
SRGAP2C-204ENST00000613462 KDRP35968 1356 aa17.4■□□□□ 0.38
SRGAP2C-204ENST00000613462 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
SRGAP2C-204ENST00000613462 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
SRGAP2C-204ENST00000613462 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
SRGAP2C-204ENST00000613462 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
SRGAP2C-204ENST00000613462 OVOS2A0A0G2JMS6 1433 aa17.39■□□□□ 0.38
SRGAP2C-204ENST00000613462 MEGF6O75095 1541 aa17.39■□□□□ 0.37
SRGAP2C-204ENST00000613462 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms