RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 USP6P35125 1406 aa25.01■■□□□ 1.59
CSNK1E-215ENST00000612795 NLRP6P59044 892 aa25■■□□□ 1.59
CSNK1E-215ENST00000612795 BCL11BQ9C0K0 894 aaPredicted RBP25■■□□□ 1.59
CSNK1E-215ENST00000612795 CABP2Q9NPB3 220 aa25■■□□□ 1.59
CSNK1E-215ENST00000612795 CENPJQ9HC77 1338 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-215ENST00000612795 CHD4Q14839 1912 aa24.98■■□□□ 1.59
CSNK1E-215ENST00000612795 ZBTB7AO95365 584 aa24.96■■□□□ 1.59
CSNK1E-215ENST00000612795 NBPF1Q3BBV0 1214 aa24.96■■□□□ 1.59
CSNK1E-215ENST00000612795 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
CSNK1E-215ENST00000612795 PTF1AQ7RTS3 328 aa24.95■■□□□ 1.58
CSNK1E-215ENST00000612795 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.58
CSNK1E-215ENST00000612795 CDCA7Q9BWT1 371 aaPredicted RBP24.94■■□□□ 1.58
CSNK1E-215ENST00000612795 PDGFDQ9GZP0 370 aaPredicted RBP24.94■■□□□ 1.58
CSNK1E-215ENST00000612795 BCL9O00512 1426 aa24.93■■□□□ 1.58
CSNK1E-215ENST00000612795 MARCH10Q8NA82 808 aaPredicted RBP24.92■■□□□ 1.58
CSNK1E-215ENST00000612795 STK32BQ9NY57 414 aa24.92■■□□□ 1.58
CSNK1E-215ENST00000612795 CABP1Q9NZU7 370 aa24.92■■□□□ 1.58
CSNK1E-215ENST00000612795 NHSQ6T4R5 1651 aa24.91■■□□□ 1.58
CSNK1E-215ENST00000612795 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
CSNK1E-215ENST00000612795 CSB-PGBD3P0DP91 1061 aa24.9■■□□□ 1.58
CSNK1E-215ENST00000612795 PROM2Q8N271 834 aa24.9■■□□□ 1.58
CSNK1E-215ENST00000612795 ATF5Q9Y2D1 282 aaPredicted RBP24.9■■□□□ 1.58
CSNK1E-215ENST00000612795 PTGER2P43116 358 aa24.89■■□□□ 1.58
CSNK1E-215ENST00000612795 TXNRD1Q16881 649 aa24.89■■□□□ 1.58
CSNK1E-215ENST00000612795 AXIN2Q9Y2T1 843 aa24.89■■□□□ 1.58
CSNK1E-215ENST00000612795 SOX12O15370 315 aa24.86■■□□□ 1.57
CSNK1E-215ENST00000612795 SLC15A2Q16348 729 aa24.86■■□□□ 1.57
CSNK1E-215ENST00000612795 ZNF784Q8NCA9 323 aaPredicted RBP24.86■■□□□ 1.57
CSNK1E-215ENST00000612795 KCNH5Q8NCM2 988 aa24.86■■□□□ 1.57
CSNK1E-215ENST00000612795 TNS2Q63HR2 1409 aa24.86■■□□□ 1.57
CSNK1E-215ENST00000612795 KAT6BQ8WYB5 2073 aa24.85■■□□□ 1.57
CSNK1E-215ENST00000612795 CARD10Q9BWT7 1032 aa24.85■■□□□ 1.57
CSNK1E-215ENST00000612795 FHDC1Q9C0D6 1143 aaPredicted RBP24.85■■□□□ 1.57
CSNK1E-215ENST00000612795 UTRNP46939 3433 aa24.84■■□□□ 1.57
CSNK1E-215ENST00000612795 ARHGEF25Q86VW2 580 aa24.84■■□□□ 1.57
CSNK1E-215ENST00000612795 MTFR1LQ9H019 292 aa24.84■■□□□ 1.57
CSNK1E-215ENST00000612795 NFAT5O94916 1531 aa24.83■■□□□ 1.57
CSNK1E-215ENST00000612795 ABCC6O95255 1503 aa24.83■■□□□ 1.57
CSNK1E-215ENST00000612795 EXOC5O00471 708 aa24.83■■□□□ 1.57
CSNK1E-215ENST00000612795 BTAF1O14981 1849 aa24.83■■□□□ 1.57
CSNK1E-215ENST00000612795 EVC2Q86UK5 1308 aa24.83■■□□□ 1.56
CSNK1E-215ENST00000612795 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
CSNK1E-215ENST00000612795 SYT17Q9BSW7 474 aa24.82■■□□□ 1.56
CSNK1E-215ENST00000612795 PAPPAQ13219 1627 aa24.82■■□□□ 1.56
CSNK1E-215ENST00000612795 LTN1O94822 1766 aa24.81■■□□□ 1.56
CSNK1E-215ENST00000612795 TTC21BQ7Z4L5 1316 aa24.81■■□□□ 1.56
CSNK1E-215ENST00000612795 MON2Q7Z3U7 1717 aa24.81■■□□□ 1.56
CSNK1E-215ENST00000612795 TTC21AQ8NDW8 1320 aa24.79■■□□□ 1.56
CSNK1E-215ENST00000612795 ZNF692Q9BU19 519 aaPredicted RBP24.78■■□□□ 1.56
CSNK1E-215ENST00000612795 SENP3-EIF4A1A0A087X0R7 540 aa24.75■■□□□ 1.55
CSNK1E-215ENST00000612795 ACSBG1Q96GR2 724 aa24.75■■□□□ 1.55
CSNK1E-215ENST00000612795 SGIP1Q9BQI5 828 aa24.75■■□□□ 1.55
CSNK1E-215ENST00000612795 USP54Q70EL1 1684 aa24.75■■□□□ 1.55
CSNK1E-215ENST00000612795 ARXQ96QS3 562 aa24.74■■□□□ 1.55
CSNK1E-215ENST00000612795 QSER1Q2KHR3 1735 aa24.74■■□□□ 1.55
CSNK1E-215ENST00000612795 KTN1Q86UP2 1357 aaKnown RBP24.73■■□□□ 1.55
CSNK1E-215ENST00000612795 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
CSNK1E-215ENST00000612795 NLRP2Q9NX02 1062 aa24.69■■□□□ 1.54
CSNK1E-215ENST00000612795 TUBGCP6Q96RT7 1819 aa24.68■■□□□ 1.54
CSNK1E-215ENST00000612795 ERBB3P21860 1342 aa24.68■■□□□ 1.54
CSNK1E-215ENST00000612795 C1QTNF8P60827 252 aa24.68■■□□□ 1.54
CSNK1E-215ENST00000612795 ROCK2O75116 1388 aaKnown RBP24.67■■□□□ 1.54
CSNK1E-215ENST00000612795 IL2RBP14784 551 aa24.67■■□□□ 1.54
CSNK1E-215ENST00000612795 GPR162Q16538 588 aa24.66■■□□□ 1.54
CSNK1E-215ENST00000612795 ZNF827Q17R98 1081 aa24.66■■□□□ 1.54
CSNK1E-215ENST00000612795 KLHL34Q8N239 644 aa24.66■■□□□ 1.54
CSNK1E-215ENST00000612795 FAM208AQ9UK61 1670 aaKnown RBP24.66■■□□□ 1.54
CSNK1E-215ENST00000612795 COL24A1Q17RW2 1714 aa24.65■■□□□ 1.54
CSNK1E-215ENST00000612795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.54
CSNK1E-215ENST00000612795 L3MBTL2Q969R5 705 aa24.65■■□□□ 1.54
CSNK1E-215ENST00000612795 USP31Q70CQ4 1352 aa24.63■■□□□ 1.53
CSNK1E-215ENST00000612795 DOT1LQ8TEK3 1739 aa24.62■■□□□ 1.53
CSNK1E-215ENST00000612795 POLD1P28340 1107 aa24.61■■□□□ 1.53
CSNK1E-215ENST00000612795 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
CSNK1E-215ENST00000612795 ANKRD24Q8TF21 1146 aa24.6■■□□□ 1.53
CSNK1E-215ENST00000612795 LRRC4BQ9NT99 713 aa24.6■■□□□ 1.53
CSNK1E-215ENST00000612795 NME9Q86XW9 330 aa24.59■■□□□ 1.53
CSNK1E-215ENST00000612795 LY75O60449 1722 aa24.58■■□□□ 1.53
CSNK1E-215ENST00000612795 GIGYF1O75420 1035 aaPredicted RBP24.58■■□□□ 1.53
CSNK1E-215ENST00000612795 SLC16A10Q8TF71 515 aa24.58■■□□□ 1.53
CSNK1E-215ENST00000612795 SHANK3Q9BYB0 1731 aa24.56■■□□□ 1.52
CSNK1E-215ENST00000612795 SLC27A3Q5K4L6 730 aa24.56■■□□□ 1.52
CSNK1E-215ENST00000612795 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
CSNK1E-215ENST00000612795 CD163L1Q9NR16 1453 aa24.56■■□□□ 1.52
CSNK1E-215ENST00000612795 SBNO2Q9Y2G9 1366 aa24.55■■□□□ 1.52
CSNK1E-215ENST00000612795 PNPLA7Q6ZV29 1317 aa24.54■■□□□ 1.52
CSNK1E-215ENST00000612795 HDGFL2Q7Z4V5 671 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-215ENST00000612795 DDX54Q8TDD1 881 aaKnown RBP24.53■■□□□ 1.52
CSNK1E-215ENST00000612795 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
CSNK1E-215ENST00000612795 TFCP2L1Q9NZI6 479 aa24.53■■□□□ 1.52
CSNK1E-215ENST00000612795 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
CSNK1E-215ENST00000612795 RGPD2P0DJD1 1756 aa24.52■■□□□ 1.52
CSNK1E-215ENST00000612795 SYTL4Q96C24 671 aaPredicted RBP24.52■■□□□ 1.52
CSNK1E-215ENST00000612795 GOLGB1Q14789 3259 aaKnown RBP24.51■■□□□ 1.51
CSNK1E-215ENST00000612795 SIN3AQ96ST3 1273 aa24.49■■□□□ 1.51
CSNK1E-215ENST00000612795 ANKRD36BQ8N2N9 1353 aa24.48■■□□□ 1.51
CSNK1E-215ENST00000612795 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
CSNK1E-215ENST00000612795 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-215ENST00000612795 KCNQ4P56696 695 aa24.47■■□□□ 1.51
CSNK1E-215ENST00000612795 NEUROD1Q13562 356 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms