RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
CLK4-214ENST00000611575 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
CLK4-214ENST00000611575 ADGRB1O14514 1584 aa10.67□□□□□ -0.7
CLK4-214ENST00000611575 NUTM2FA1L443 756 aa10.66□□□□□ -0.7
CLK4-214ENST00000611575 FAM83GA6ND36 823 aa10.66□□□□□ -0.7
CLK4-214ENST00000611575 PPARGC1BQ86YN6 1023 aaKnown RBP10.66□□□□□ -0.7
CLK4-214ENST00000611575 STK26Q9P289 416 aa10.66□□□□□ -0.7
CLK4-214ENST00000611575 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
CLK4-214ENST00000611575 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
CLK4-214ENST00000611575 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
CLK4-214ENST00000611575 PCDHB8Q9UN66 801 aa10.65□□□□□ -0.7
CLK4-214ENST00000611575 THSD7AQ9UPZ6 1657 aa10.65□□□□□ -0.7
CLK4-214ENST00000611575 ALS2Q96Q42 1657 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 HRCP23327 699 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 PSME1Q06323 249 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
CLK4-214ENST00000611575 CABLES1Q8TDN4 633 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 MPHOSPH9Q99550 1183 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
CLK4-214ENST00000611575 RGL3Q3MIN7 710 aa10.63□□□□□ -0.71
CLK4-214ENST00000611575 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
CLK4-214ENST00000611575 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
CLK4-214ENST00000611575 SPATA31A5Q5VU36 1347 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 SPATA31A7Q8IWB4 1347 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 PRAM1Q96QH2 718 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 TULP4Q9NRJ4 1543 aa10.61□□□□□ -0.71
CLK4-214ENST00000611575 COL14A1Q05707 1796 aaKnown RBP10.61□□□□□ -0.71
CLK4-214ENST00000611575 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
CLK4-214ENST00000611575 SEC24BO95487 1268 aa10.6□□□□□ -0.71
CLK4-214ENST00000611575 TNS1Q9HBL0 1735 aaKnown RBP10.6□□□□□ -0.71
CLK4-214ENST00000611575 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
CLK4-214ENST00000611575 BAG6P46379 1132 aa10.59□□□□□ -0.71
CLK4-214ENST00000611575 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
CLK4-214ENST00000611575 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
CLK4-214ENST00000611575 PSEN1P49768 467 aa10.58□□□□□ -0.72
CLK4-214ENST00000611575 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
CLK4-214ENST00000611575 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
CLK4-214ENST00000611575 ATP7BP35670 1465 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 EIF3AQ14152 1382 aaKnown RBP10.57□□□□□ -0.72
CLK4-214ENST00000611575 PARD3Q8TEW0 1356 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 IER5LQ5T953 404 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 CAMKK2Q96RR4 588 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
CLK4-214ENST00000611575 PSDA5PKW4 1024 aaPredicted RBP10.56□□□□□ -0.72
CLK4-214ENST00000611575 EN1Q05925 392 aaPredicted RBP10.56□□□□□ -0.72
CLK4-214ENST00000611575 PMFBP1Q8TBY8 1022 aa10.56□□□□□ -0.72
CLK4-214ENST00000611575 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
CLK4-214ENST00000611575 POLR3AO14802 1390 aaPredicted RBP10.54□□□□□ -0.72
CLK4-214ENST00000611575 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
CLK4-214ENST00000611575 UTRNP46939 3433 aa10.54□□□□□ -0.72
CLK4-214ENST00000611575 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
CLK4-214ENST00000611575 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
CLK4-214ENST00000611575 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLK4-214ENST00000611575 R3HDM1Q15032 1099 aaKnown RBP10.53□□□□□ -0.72
CLK4-214ENST00000611575 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
CLK4-214ENST00000611575 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
CLK4-214ENST00000611575 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
CLK4-214ENST00000611575 LMO7Q8WWI1 1683 aa10.53□□□□□ -0.72
CLK4-214ENST00000611575 RREB1Q92766 1687 aa10.53□□□□□ -0.72
CLK4-214ENST00000611575 CPDO75976 1380 aa10.52□□□□□ -0.72
CLK4-214ENST00000611575 KIAA0232Q92628 1395 aa10.52□□□□□ -0.72
CLK4-214ENST00000611575 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
CLK4-214ENST00000611575 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
CLK4-214ENST00000611575 SSH2Q76I76 1423 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 TOPAZ1Q8N9V7 1692 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
CLK4-214ENST00000611575 LMOD2Q6P5Q4 547 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 FAM196AQ6ZSG2 479 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 HIRIP3Q9BW71 556 aaPredicted RBP10.51□□□□□ -0.73
CLK4-214ENST00000611575 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 POGKQ9P215 609 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 USP19O94966 1318 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
CLK4-214ENST00000611575 CAMTA1Q9Y6Y1 1673 aa10.5□□□□□ -0.73
CLK4-214ENST00000611575 PRDM11Q9NQV5 511 aa10.5□□□□□ -0.73
CLK4-214ENST00000611575 TRAK1Q9UPV9 953 aa10.5□□□□□ -0.73
CLK4-214ENST00000611575 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
CLK4-214ENST00000611575 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
CLK4-214ENST00000611575 NUP188Q5SRE5 1749 aa10.49□□□□□ -0.73
CLK4-214ENST00000611575 ARHGEF28Q8N1W1 1705 aaKnown RBP10.49□□□□□ -0.73
CLK4-214ENST00000611575 TRIM37O94972 964 aa10.48□□□□□ -0.73
CLK4-214ENST00000611575 PLCG2P16885 1265 aa10.48□□□□□ -0.73
CLK4-214ENST00000611575 NUDT16Q96DE0 195 aaKnown RBP10.48□□□□□ -0.73
CLK4-214ENST00000611575 PEAK1Q9H792 1746 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 A0A0G2JS52 829 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 MYT1Q01538 1121 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 RAB3GAP2Q9H2M9 1393 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 BCL9O00512 1426 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 ITSN1Q15811 1721 aa10.47□□□□□ -0.73
CLK4-214ENST00000611575 CHRNA2Q15822 529 aa10.46□□□□□ -0.73
CLK4-214ENST00000611575 NGDNQ8NEJ9 315 aaKnown RBP10.46□□□□□ -0.73
CLK4-214ENST00000611575 THRAP3Q9Y2W1 955 aaKnown RBP10.46□□□□□ -0.73
CLK4-214ENST00000611575 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.74
CLK4-214ENST00000611575 PARP4Q9UKK3 1724 aaKnown RBP10.46□□□□□ -0.74
CLK4-214ENST00000611575 RGPD3A6NKT7 1758 aaPredicted RBP10.46□□□□□ -0.74
CLK4-214ENST00000611575 RGPD4Q7Z3J3 1758 aa10.46□□□□□ -0.74
CLK4-214ENST00000611575 APBA3O96018 575 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms