RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 MON2Q7Z3U7 1717 aa30.67■■■□□ 2.5
CBWD3-207ENST00000611426 PSDA5PKW4 1024 aaPredicted RBP30.66■■■□□ 2.5
CBWD3-207ENST00000611426 HDGFL2Q7Z4V5 671 aaPredicted RBP30.66■■■□□ 2.5
CBWD3-207ENST00000611426 SLC12A5Q9H2X9 1139 aa30.66■■■□□ 2.5
CBWD3-207ENST00000611426 PARP4Q9UKK3 1724 aaKnown RBP30.65■■■□□ 2.5
CBWD3-207ENST00000611426 WDR17Q8IZU2 1322 aa30.65■■■□□ 2.5
CBWD3-207ENST00000611426 CAMKK2Q96RR4 588 aa30.64■■■□□ 2.5
CBWD3-207ENST00000611426 CD163L1Q9NR16 1453 aa30.63■■■□□ 2.49
CBWD3-207ENST00000611426 PUS7Q96PZ0 661 aaKnown RBP30.63■■■□□ 2.49
CBWD3-207ENST00000611426 CSB-PGBD3P0DP91 1061 aa30.62■■■□□ 2.49
CBWD3-207ENST00000611426 DDB1Q16531 1140 aa30.61■■■□□ 2.49
CBWD3-207ENST00000611426 NME9Q86XW9 330 aa30.61■■■□□ 2.49
CBWD3-207ENST00000611426 TERF2IPQ9NYB0 399 aa30.61■■■□□ 2.49
CBWD3-207ENST00000611426 RGPD5Q99666 1765 aa30.61■■■□□ 2.49
CBWD3-207ENST00000611426 USP31Q70CQ4 1352 aa30.6■■■□□ 2.49
CBWD3-207ENST00000611426 ST20-MTHFSA0A0A6YYL1 179 aa30.6■■■□□ 2.49
CBWD3-207ENST00000611426 C11orf95C9JLR9 678 aaPredicted RBP30.6■■■□□ 2.49
CBWD3-207ENST00000611426 NFAT5O94916 1531 aa30.6■■■□□ 2.49
CBWD3-207ENST00000611426 R3HDM1Q15032 1099 aaKnown RBP30.57■■■□□ 2.48
CBWD3-207ENST00000611426 TESK2Q96S53 571 aa30.57■■■□□ 2.48
CBWD3-207ENST00000611426 CDCA7Q9BWT1 371 aaPredicted RBP30.57■■■□□ 2.48
CBWD3-207ENST00000611426 CARD10Q9BWT7 1032 aa30.57■■■□□ 2.48
CBWD3-207ENST00000611426 PARD3Q8TEW0 1356 aa30.57■■■□□ 2.48
CBWD3-207ENST00000611426 SLC24A1O60721 1099 aa30.56■■■□□ 2.48
CBWD3-207ENST00000611426 EDC4Q6P2E9 1401 aaKnown RBP30.56■■■□□ 2.48
CBWD3-207ENST00000611426 OVOS2A0A0G2JMS6 1433 aa30.55■■■□□ 2.48
CBWD3-207ENST00000611426 OVOS2A0A0J9YW53 1432 aa30.55■■■□□ 2.48
CBWD3-207ENST00000611426 OVOS2Q6IE36 1432 aa30.55■■■□□ 2.48
CBWD3-207ENST00000611426 A0A1W2PP64 1363 aa30.54■■■□□ 2.48
CBWD3-207ENST00000611426 LRRC37A3O60309 1634 aa30.54■■■□□ 2.48
CBWD3-207ENST00000611426 USP54Q70EL1 1684 aa30.52■■■□□ 2.48
CBWD3-207ENST00000611426 ABCC6O95255 1503 aa30.51■■■□□ 2.47
CBWD3-207ENST00000611426 WNK3Q9BYP7 1800 aa30.51■■■□□ 2.47
CBWD3-207ENST00000611426 LRP5O75197 1615 aa30.5■■■□□ 2.47
CBWD3-207ENST00000611426 PEAK1Q9H792 1746 aa30.49■■■□□ 2.47
CBWD3-207ENST00000611426 NINLQ9Y2I6 1382 aa30.49■■■□□ 2.47
CBWD3-207ENST00000611426 CCDC7Q96M83 1385 aa30.48■■■□□ 2.47
CBWD3-207ENST00000611426 MARCH10Q8NA82 808 aaPredicted RBP30.48■■■□□ 2.47
CBWD3-207ENST00000611426 EXOC5O00471 708 aa30.47■■■□□ 2.47
CBWD3-207ENST00000611426 NBPF14Q5TI25 921 aa30.46■■■□□ 2.47
CBWD3-207ENST00000611426 LTN1O94822 1766 aa30.46■■■□□ 2.47
CBWD3-207ENST00000611426 NLRP2Q9NX02 1062 aa30.45■■■□□ 2.47
CBWD3-207ENST00000611426 RREB1Q92766 1687 aa30.45■■■□□ 2.47
CBWD3-207ENST00000611426 ERBB3P21860 1342 aa30.44■■■□□ 2.46
CBWD3-207ENST00000611426 SBF2Q86WG5 1849 aa30.44■■■□□ 2.46
CBWD3-207ENST00000611426 BCL11BQ9C0K0 894 aaPredicted RBP30.43■■■□□ 2.46
CBWD3-207ENST00000611426 USP47Q96K76 1375 aa30.43■■■□□ 2.46
CBWD3-207ENST00000611426 TMF1P82094 1093 aa30.42■■■□□ 2.46
CBWD3-207ENST00000611426 ANKRD24Q8TF21 1146 aa30.42■■■□□ 2.46
CBWD3-207ENST00000611426 NUP188Q5SRE5 1749 aa30.42■■■□□ 2.46
CBWD3-207ENST00000611426 PLSCR1O15162 318 aa30.41■■■□□ 2.46
CBWD3-207ENST00000611426 PTF1AQ7RTS3 328 aa30.4■■■□□ 2.46
CBWD3-207ENST00000611426 COG3Q96JB2 828 aa30.4■■■□□ 2.46
CBWD3-207ENST00000611426 BCL9O00512 1426 aa30.39■■■□□ 2.46
CBWD3-207ENST00000611426 ANKRD36BQ8N2N9 1353 aa30.37■■■□□ 2.45
CBWD3-207ENST00000611426 IL2RBP14784 551 aa30.36■■■□□ 2.45
CBWD3-207ENST00000611426 IP6K1Q92551 441 aa30.36■■■□□ 2.45
CBWD3-207ENST00000611426 TIMELESSQ9UNS1 1208 aa30.35■■■□□ 2.45
CBWD3-207ENST00000611426 TNS2Q63HR2 1409 aa30.35■■■□□ 2.45
CBWD3-207ENST00000611426 RGPD3A6NKT7 1758 aaPredicted RBP30.33■■■□□ 2.45
CBWD3-207ENST00000611426 RGPD4Q7Z3J3 1758 aa30.33■■■□□ 2.45
CBWD3-207ENST00000611426 CDCA8Q53HL2 280 aa30.32■■■□□ 2.44
CBWD3-207ENST00000611426 LTV1Q96GA3 475 aaPredicted RBP30.32■■■□□ 2.44
CBWD3-207ENST00000611426 FBLN1P23142 703 aa30.29■■■□□ 2.44
CBWD3-207ENST00000611426 AMPHP49418 695 aa30.29■■■□□ 2.44
CBWD3-207ENST00000611426 MAP3K19Q56UN5 1328 aa30.29■■■□□ 2.44
CBWD3-207ENST00000611426 PROM2Q8N271 834 aa30.28■■■□□ 2.44
CBWD3-207ENST00000611426 FYB1O15117 783 aa30.27■■■□□ 2.44
CBWD3-207ENST00000611426 KCNQ2O43526 872 aa30.27■■■□□ 2.44
CBWD3-207ENST00000611426 HOXC9P31274 260 aa30.27■■■□□ 2.44
CBWD3-207ENST00000611426 ACSBG1Q96GR2 724 aa30.26■■■□□ 2.43
CBWD3-207ENST00000611426 GGNBP2Q9H3C7 697 aa30.26■■■□□ 2.43
CBWD3-207ENST00000611426 TXNRD1Q16881 649 aa30.23■■■□□ 2.43
CBWD3-207ENST00000611426 FAM208AQ9UK61 1670 aaKnown RBP30.22■■■□□ 2.43
CBWD3-207ENST00000611426 ANO8Q9HCE9 1232 aaPredicted RBP30.22■■■□□ 2.43
CBWD3-207ENST00000611426 RRS1Q15050 365 aaKnown RBP30.21■■■□□ 2.43
CBWD3-207ENST00000611426 SPON1Q9HCB6 807 aa30.2■■■□□ 2.43
CBWD3-207ENST00000611426 KAT6BQ8WYB5 2073 aa30.2■■■□□ 2.42
CBWD3-207ENST00000611426 NHSQ6T4R5 1651 aa30.2■■■□□ 2.42
CBWD3-207ENST00000611426 DDX54Q8TDD1 881 aaKnown RBP30.19■■■□□ 2.42
CBWD3-207ENST00000611426 RTL1A6NKG5 1358 aa30.17■■■□□ 2.42
CBWD3-207ENST00000611426 STK32BQ9NY57 414 aa30.15■■■□□ 2.42
CBWD3-207ENST00000611426 CARD14Q9BXL6 1004 aa30.15■■■□□ 2.42
CBWD3-207ENST00000611426 PPP1R1BQ9UD71 204 aaPredicted RBP30.15■■■□□ 2.42
CBWD3-207ENST00000611426 KIF20BQ96Q89 1820 aa30.14■■■□□ 2.41
CBWD3-207ENST00000611426 RGPD2P0DJD1 1756 aa30.13■■■□□ 2.41
CBWD3-207ENST00000611426 SLC15A2Q16348 729 aa30.12■■■□□ 2.41
CBWD3-207ENST00000611426 NBPF6Q5VWK0 638 aa30.11■■■□□ 2.41
CBWD3-207ENST00000611426 NBPF4Q96M43 638 aa30.11■■■□□ 2.41
CBWD3-207ENST00000611426 PDGFDQ9GZP0 370 aaPredicted RBP30.11■■■□□ 2.41
CBWD3-207ENST00000611426 BTAF1O14981 1849 aa30.1■■■□□ 2.41
CBWD3-207ENST00000611426 MYOM1P52179 1685 aa30.1■■■□□ 2.41
CBWD3-207ENST00000611426 NSD3Q9BZ95 1437 aa30.1■■■□□ 2.41
CBWD3-207ENST00000611426 ZCRB1Q8TBF4 217 aaKnown RBP30.1■■■□□ 2.41
CBWD3-207ENST00000611426 SMG6Q86US8 1419 aaKnown RBP30.09■■■□□ 2.41
CBWD3-207ENST00000611426 HSP90AB2PQ58FF8 381 aa30.08■■■□□ 2.41
CBWD3-207ENST00000611426 CASZ1Q86V15 1759 aa30.07■■■□□ 2.4
CBWD3-207ENST00000611426 USHBP1Q8N6Y0 703 aa30.07■■■□□ 2.4
CBWD3-207ENST00000611426 POLR3GLQ9BT43 218 aa30.07■■■□□ 2.4
CBWD3-207ENST00000611426 ZBTB7AO95365 584 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms