RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
SNCA-212ENST00000611107 RGPD2P0DJD1 1756 aa12.17□□□□□ -0.46
SNCA-212ENST00000611107 A0A0G2JS52 829 aa12.16□□□□□ -0.46
SNCA-212ENST00000611107 EVA1CP58658 441 aa12.16□□□□□ -0.46
SNCA-212ENST00000611107 MYT1Q01538 1121 aa12.16□□□□□ -0.46
SNCA-212ENST00000611107 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
SNCA-212ENST00000611107 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
SNCA-212ENST00000611107 TMF1P82094 1093 aa12.15□□□□□ -0.46
SNCA-212ENST00000611107 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
SNCA-212ENST00000611107 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
SNCA-212ENST00000611107 LRRC37A3O60309 1634 aa12.15□□□□□ -0.47
SNCA-212ENST00000611107 CRB1P82279 1406 aa12.14□□□□□ -0.47
SNCA-212ENST00000611107 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
SNCA-212ENST00000611107 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
SNCA-212ENST00000611107 FYB1O15117 783 aa12.13□□□□□ -0.47
SNCA-212ENST00000611107 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
SNCA-212ENST00000611107 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
SNCA-212ENST00000611107 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
SNCA-212ENST00000611107 SBF2Q86WG5 1849 aa12.13□□□□□ -0.47
SNCA-212ENST00000611107 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
SNCA-212ENST00000611107 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
SNCA-212ENST00000611107 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
SNCA-212ENST00000611107 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
SNCA-212ENST00000611107 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
SNCA-212ENST00000611107 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
SNCA-212ENST00000611107 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
SNCA-212ENST00000611107 TOM1L2Q6ZVM7 507 aa12.11□□□□□ -0.47
SNCA-212ENST00000611107 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
SNCA-212ENST00000611107 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
SNCA-212ENST00000611107 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
SNCA-212ENST00000611107 RRS1Q15050 365 aaKnown RBP12.09□□□□□ -0.47
SNCA-212ENST00000611107 ABCC6O95255 1503 aa12.09□□□□□ -0.47
SNCA-212ENST00000611107 FAM208AQ9UK61 1670 aaKnown RBP12.09□□□□□ -0.47
SNCA-212ENST00000611107 ERBB3P21860 1342 aa12.09□□□□□ -0.47
SNCA-212ENST00000611107 TRIM37O94972 964 aa12.08□□□□□ -0.48
SNCA-212ENST00000611107 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNCA-212ENST00000611107 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
SNCA-212ENST00000611107 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
SNCA-212ENST00000611107 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
SNCA-212ENST00000611107 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
SNCA-212ENST00000611107 CARD10Q9BWT7 1032 aa12.08□□□□□ -0.48
SNCA-212ENST00000611107 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
SNCA-212ENST00000611107 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SNCA-212ENST00000611107 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
SNCA-212ENST00000611107 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 HOXC9P31274 260 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 IP6K1Q92551 441 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 COG3Q96JB2 828 aa12.06□□□□□ -0.48
SNCA-212ENST00000611107 EZH2Q15910 746 aaKnown RBP12.05□□□□□ -0.48
SNCA-212ENST00000611107 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
SNCA-212ENST00000611107 KAT6BQ8WYB5 2073 aa12.05□□□□□ -0.48
SNCA-212ENST00000611107 RREB1Q92766 1687 aa12.04□□□□□ -0.48
SNCA-212ENST00000611107 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
SNCA-212ENST00000611107 CAMKK2Q96RR4 588 aa12.04□□□□□ -0.48
SNCA-212ENST00000611107 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
SNCA-212ENST00000611107 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 PANK3Q9H999 370 aa12.03□□□□□ -0.48
SNCA-212ENST00000611107 DDB1Q16531 1140 aa12.02□□□□□ -0.49
SNCA-212ENST00000611107 CDCA8Q53HL2 280 aa12.02□□□□□ -0.49
SNCA-212ENST00000611107 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
SNCA-212ENST00000611107 MEGF6O75095 1541 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
SNCA-212ENST00000611107 KCNQ2O43526 872 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 APBA3O96018 575 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 AMPHP49418 695 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
SNCA-212ENST00000611107 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
SNCA-212ENST00000611107 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
SNCA-212ENST00000611107 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
SNCA-212ENST00000611107 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
SNCA-212ENST00000611107 BAG6P46379 1132 aa11.99□□□□□ -0.49
SNCA-212ENST00000611107 PROM2Q8N271 834 aa11.99□□□□□ -0.49
SNCA-212ENST00000611107 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
SNCA-212ENST00000611107 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
SNCA-212ENST00000611107 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
SNCA-212ENST00000611107 EXOC5O00471 708 aa11.98□□□□□ -0.49
SNCA-212ENST00000611107 IL2RBP14784 551 aa11.98□□□□□ -0.49
SNCA-212ENST00000611107 TNNT2P45379 298 aaPredicted RBP11.98□□□□□ -0.49
SNCA-212ENST00000611107 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
SNCA-212ENST00000611107 BTAF1O14981 1849 aa11.97□□□□□ -0.49
SNCA-212ENST00000611107 BCL9O00512 1426 aa11.97□□□□□ -0.49
SNCA-212ENST00000611107 INSRP06213 1382 aa11.97□□□□□ -0.49
SNCA-212ENST00000611107 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
SNCA-212ENST00000611107 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
SNCA-212ENST00000611107 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
SNCA-212ENST00000611107 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
SNCA-212ENST00000611107 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
SNCA-212ENST00000611107 FLT4P35916 1363 aa11.95□□□□□ -0.5
SNCA-212ENST00000611107 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
SNCA-212ENST00000611107 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
SNCA-212ENST00000611107 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms