RNA–Protein interactions for RNA: ENST00000610559.4

DDX3X-207, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 4

Gene DDX3X, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-207ENST00000610559 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
DDX3X-207ENST00000610559 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
DDX3X-207ENST00000610559 PTPRNQ16849 979 aa13.12□□□□□ -0.31
DDX3X-207ENST00000610559 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
DDX3X-207ENST00000610559 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
DDX3X-207ENST00000610559 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
DDX3X-207ENST00000610559 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
DDX3X-207ENST00000610559 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
DDX3X-207ENST00000610559 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
DDX3X-207ENST00000610559 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
DDX3X-207ENST00000610559 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
DDX3X-207ENST00000610559 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
DDX3X-207ENST00000610559 ATP9BO43861 1147 aa13.08□□□□□ -0.32
DDX3X-207ENST00000610559 CTHP32929 405 aa13.08□□□□□ -0.32
DDX3X-207ENST00000610559 ZC3H4Q9UPT8 1303 aaKnown RBP13.08□□□□□ -0.32
DDX3X-207ENST00000610559 ATG7O95352 703 aa13.07□□□□□ -0.32
DDX3X-207ENST00000610559 MSS51Q4VC12 460 aa13.07□□□□□ -0.32
DDX3X-207ENST00000610559 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
DDX3X-207ENST00000610559 EVA1BQ9NVM1 165 aa13.06□□□□□ -0.32
DDX3X-207ENST00000610559 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
DDX3X-207ENST00000610559 SPSB2Q99619 263 aa13.05□□□□□ -0.32
DDX3X-207ENST00000610559 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
DDX3X-207ENST00000610559 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
DDX3X-207ENST00000610559 KDM6BO15054 1643 aa13.04□□□□□ -0.32
DDX3X-207ENST00000610559 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
DDX3X-207ENST00000610559 MMP16P51512 607 aa13.03□□□□□ -0.32
DDX3X-207ENST00000610559 COPS2P61201 443 aa13.03□□□□□ -0.32
DDX3X-207ENST00000610559 BRD1O95696 1058 aa13.02□□□□□ -0.33
DDX3X-207ENST00000610559 KCNH2Q12809 1159 aa13.02□□□□□ -0.33
DDX3X-207ENST00000610559 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
DDX3X-207ENST00000610559 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
DDX3X-207ENST00000610559 PRDM9Q9NQV7 894 aa13.02□□□□□ -0.33
DDX3X-207ENST00000610559 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
DDX3X-207ENST00000610559 FAM69CQ0P6D2 419 aa13.01□□□□□ -0.33
DDX3X-207ENST00000610559 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
DDX3X-207ENST00000610559 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
DDX3X-207ENST00000610559 OCSTAMPQ9BR26 566 aa13.01□□□□□ -0.33
DDX3X-207ENST00000610559 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
DDX3X-207ENST00000610559 PDXDC2PQ6P474 469 aa13□□□□□ -0.33
DDX3X-207ENST00000610559 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
DDX3X-207ENST00000610559 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
DDX3X-207ENST00000610559 FAM174AQ8TBP5 190 aa12.99□□□□□ -0.33
DDX3X-207ENST00000610559 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
DDX3X-207ENST00000610559 SKIP12755 728 aa12.98□□□□□ -0.33
DDX3X-207ENST00000610559 PTK2Q05397 1052 aa12.98□□□□□ -0.33
DDX3X-207ENST00000610559 GPKOWQ92917 476 aaPredicted RBP eCLIP12.98□□□□□ -0.33
DDX3X-207ENST00000610559 KCNA1Q09470 495 aa12.97□□□□□ -0.33
DDX3X-207ENST00000610559 CEP126Q9P2H0 1117 aa12.97□□□□□ -0.33
DDX3X-207ENST00000610559 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
DDX3X-207ENST00000610559 TLL1O43897 1013 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
DDX3X-207ENST00000610559 CUL7Q14999 1698 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 ZPR1O75312 459 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 DEPDC4Q8N2C3 294 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 KRTAP3-3Q9BYR6 98 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 KRTAP3-2Q9BYR7 98 aa12.94□□□□□ -0.34
DDX3X-207ENST00000610559 ADH1BP00325 375 aa12.93□□□□□ -0.34
DDX3X-207ENST00000610559 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
DDX3X-207ENST00000610559 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
DDX3X-207ENST00000610559 PTCRAQ6ISU1 281 aaPredicted RBP12.93□□□□□ -0.34
DDX3X-207ENST00000610559 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
DDX3X-207ENST00000610559 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
DDX3X-207ENST00000610559 MCCD1P59942 119 aaPredicted RBP12.92□□□□□ -0.34
DDX3X-207ENST00000610559 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
DDX3X-207ENST00000610559 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
DDX3X-207ENST00000610559 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
DDX3X-207ENST00000610559 ADAM32Q8TC27 787 aa12.91□□□□□ -0.34
DDX3X-207ENST00000610559 IGF1RP08069 1367 aa12.91□□□□□ -0.34
DDX3X-207ENST00000610559 GLI2P10070 1586 aa12.9□□□□□ -0.34
DDX3X-207ENST00000610559 CCDC24Q8N4L8 307 aa12.9□□□□□ -0.34
DDX3X-207ENST00000610559 MTRQ99707 1265 aa12.9□□□□□ -0.34
DDX3X-207ENST00000610559 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
DDX3X-207ENST00000610559 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
DDX3X-207ENST00000610559 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
DDX3X-207ENST00000610559 NYAP1Q6ZVC0 841 aa12.89□□□□□ -0.35
DDX3X-207ENST00000610559 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
DDX3X-207ENST00000610559 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
DDX3X-207ENST00000610559 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
DDX3X-207ENST00000610559 TMEM164Q5U3C3 297 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 RNF135Q8IUD6 432 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 NOVA2Q9UNW9 492 aaKnown RBP12.88□□□□□ -0.35
DDX3X-207ENST00000610559 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
DDX3X-207ENST00000610559 NCOA4Q13772 614 aa12.87□□□□□ -0.35
DDX3X-207ENST00000610559 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
DDX3X-207ENST00000610559 ZNF516Q92618 1163 aa12.87□□□□□ -0.35
DDX3X-207ENST00000610559 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
DDX3X-207ENST00000610559 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
DDX3X-207ENST00000610559 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
DDX3X-207ENST00000610559 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms