RNA–Protein interactions for RNA: ENST00000610369.4

TARDBP-211, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-211ENST00000610369 SOX12O15370 315 aa13.6□□□□□ -0.23
TARDBP-211ENST00000610369 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
TARDBP-211ENST00000610369 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
TARDBP-211ENST00000610369 CSB-PGBD3P0DP91 1061 aa13.59□□□□□ -0.23
TARDBP-211ENST00000610369 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
TARDBP-211ENST00000610369 APBA3O96018 575 aa13.58□□□□□ -0.24
TARDBP-211ENST00000610369 DDB1Q16531 1140 aa13.58□□□□□ -0.24
TARDBP-211ENST00000610369 NME9Q86XW9 330 aa13.58□□□□□ -0.24
TARDBP-211ENST00000610369 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
TARDBP-211ENST00000610369 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
TARDBP-211ENST00000610369 TMF1P82094 1093 aa13.57□□□□□ -0.24
TARDBP-211ENST00000610369 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
TARDBP-211ENST00000610369 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
TARDBP-211ENST00000610369 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
TARDBP-211ENST00000610369 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
TARDBP-211ENST00000610369 A0A1W2PP64 1363 aa13.56□□□□□ -0.24
TARDBP-211ENST00000610369 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
TARDBP-211ENST00000610369 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
TARDBP-211ENST00000610369 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
TARDBP-211ENST00000610369 EXOC5O00471 708 aa13.54□□□□□ -0.24
TARDBP-211ENST00000610369 USP47Q96K76 1375 aa13.54□□□□□ -0.24
TARDBP-211ENST00000610369 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
TARDBP-211ENST00000610369 ABCC6O95255 1503 aa13.54□□□□□ -0.24
TARDBP-211ENST00000610369 COG3Q96JB2 828 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 NFAT5O94916 1531 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
TARDBP-211ENST00000610369 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
TARDBP-211ENST00000610369 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
TARDBP-211ENST00000610369 COL18A1P39060 1754 aa13.52□□□□□ -0.25
TARDBP-211ENST00000610369 MON2Q7Z3U7 1717 aa13.51□□□□□ -0.25
TARDBP-211ENST00000610369 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
TARDBP-211ENST00000610369 ERBB3P21860 1342 aa13.51□□□□□ -0.25
TARDBP-211ENST00000610369 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-211ENST00000610369 PLSCR1O15162 318 aa13.51□□□□□ -0.25
TARDBP-211ENST00000610369 IP6K1Q92551 441 aa13.51□□□□□ -0.25
TARDBP-211ENST00000610369 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-211ENST00000610369 BCL9O00512 1426 aa13.5□□□□□ -0.25
TARDBP-211ENST00000610369 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
TARDBP-211ENST00000610369 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-211ENST00000610369 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
TARDBP-211ENST00000610369 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
TARDBP-211ENST00000610369 IL2RBP14784 551 aa13.49□□□□□ -0.25
TARDBP-211ENST00000610369 FYB1O15117 783 aa13.47□□□□□ -0.25
TARDBP-211ENST00000610369 AMPHP49418 695 aa13.47□□□□□ -0.25
TARDBP-211ENST00000610369 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
TARDBP-211ENST00000610369 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.25
TARDBP-211ENST00000610369 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
TARDBP-211ENST00000610369 MAP3K19Q56UN5 1328 aa13.44□□□□□ -0.26
TARDBP-211ENST00000610369 HOXC9P31274 260 aa13.44□□□□□ -0.26
TARDBP-211ENST00000610369 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
TARDBP-211ENST00000610369 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
TARDBP-211ENST00000610369 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
TARDBP-211ENST00000610369 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-211ENST00000610369 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
TARDBP-211ENST00000610369 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
TARDBP-211ENST00000610369 FBLN1P23142 703 aa13.41□□□□□ -0.26
TARDBP-211ENST00000610369 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.268e-11■■□□□ 12.1
TARDBP-211ENST00000610369 PTF1AQ7RTS3 328 aa13.41□□□□□ -0.26
TARDBP-211ENST00000610369 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
TARDBP-211ENST00000610369 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
TARDBP-211ENST00000610369 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
TARDBP-211ENST00000610369 PROM2Q8N271 834 aa13.4□□□□□ -0.26
TARDBP-211ENST00000610369 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
TARDBP-211ENST00000610369 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
TARDBP-211ENST00000610369 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
TARDBP-211ENST00000610369 LRP5O75197 1615 aa13.39□□□□□ -0.27
TARDBP-211ENST00000610369 KCNQ2O43526 872 aa13.39□□□□□ -0.27
TARDBP-211ENST00000610369 ZCRB1Q8TBF4 217 aaKnown RBP13.39□□□□□ -0.27
TARDBP-211ENST00000610369 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
TARDBP-211ENST00000610369 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
TARDBP-211ENST00000610369 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
TARDBP-211ENST00000610369 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
TARDBP-211ENST00000610369 LTN1O94822 1766 aa13.37□□□□□ -0.27
TARDBP-211ENST00000610369 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
TARDBP-211ENST00000610369 RAPGEF4Q8WZA2 1011 aa13.37□□□□□ -0.27
TARDBP-211ENST00000610369 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
TARDBP-211ENST00000610369 RREB1Q92766 1687 aa13.37□□□□□ -0.27
TARDBP-211ENST00000610369 INSRP06213 1382 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 FLT4P35916 1363 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
TARDBP-211ENST00000610369 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
TARDBP-211ENST00000610369 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
TARDBP-211ENST00000610369 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-211ENST00000610369 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
TARDBP-211ENST00000610369 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
TARDBP-211ENST00000610369 SLC15A2Q16348 729 aa13.34□□□□□ -0.27
TARDBP-211ENST00000610369 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-211ENST00000610369 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
TARDBP-211ENST00000610369 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.27
TARDBP-211ENST00000610369 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-211ENST00000610369 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
TARDBP-211ENST00000610369 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-211ENST00000610369 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-211ENST00000610369 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms