RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 H3BQV1 296 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
LINC02538-201ENST00000609107 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
LINC02538-201ENST00000609107 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
LINC02538-201ENST00000609107 POGZQ7Z3K3 1410 aa17.34■□□□□ 0.37
LINC02538-201ENST00000609107 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.37
LINC02538-201ENST00000609107 RIC3Q7Z5B4 369 aa17.33■□□□□ 0.36
LINC02538-201ENST00000609107 SRCIN1Q9C0H9 1055 aa17.33■□□□□ 0.36
LINC02538-201ENST00000609107 TPM4P67936 248 aa17.33■□□□□ 0.36
LINC02538-201ENST00000609107 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
LINC02538-201ENST00000609107 MBD3O95983 291 aa17.31■□□□□ 0.36
LINC02538-201ENST00000609107 ESCO1Q5FWF5 840 aa17.31■□□□□ 0.36
LINC02538-201ENST00000609107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC02538-201ENST00000609107 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
LINC02538-201ENST00000609107 C8orf34Q49A92 452 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 MCM10Q7L590 875 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
LINC02538-201ENST00000609107 NASPP49321 788 aaPredicted RBP17.3■□□□□ 0.36
LINC02538-201ENST00000609107 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
LINC02538-201ENST00000609107 AIMP1Q12904 312 aaKnown RBP17.29■□□□□ 0.36
LINC02538-201ENST00000609107 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
LINC02538-201ENST00000609107 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
LINC02538-201ENST00000609107 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
LINC02538-201ENST00000609107 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
LINC02538-201ENST00000609107 CCDC9Q9Y3X0 531 aaKnown RBP17.28■□□□□ 0.36
LINC02538-201ENST00000609107 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
LINC02538-201ENST00000609107 ATF3P18847 181 aa17.28■□□□□ 0.36
LINC02538-201ENST00000609107 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
LINC02538-201ENST00000609107 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
LINC02538-201ENST00000609107 IL27Q8NEV9 243 aa17.28■□□□□ 0.36
LINC02538-201ENST00000609107 HIP1O00291 1037 aa17.27■□□□□ 0.36
LINC02538-201ENST00000609107 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
LINC02538-201ENST00000609107 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
LINC02538-201ENST00000609107 PSMA5P28066 241 aa17.27■□□□□ 0.36
LINC02538-201ENST00000609107 TTC21BQ7Z4L5 1316 aa17.27■□□□□ 0.36
LINC02538-201ENST00000609107 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.35
LINC02538-201ENST00000609107 MBIPQ9NS73 344 aa17.27■□□□□ 0.35
LINC02538-201ENST00000609107 PTPRCP08575 1304 aa17.26■□□□□ 0.35
LINC02538-201ENST00000609107 CAVIN1Q6NZI2 390 aaKnown RBP17.26■□□□□ 0.35
LINC02538-201ENST00000609107 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
LINC02538-201ENST00000609107 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
LINC02538-201ENST00000609107 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
LINC02538-201ENST00000609107 EVA1CP58658 441 aa17.25■□□□□ 0.35
LINC02538-201ENST00000609107 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
LINC02538-201ENST00000609107 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
LINC02538-201ENST00000609107 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
LINC02538-201ENST00000609107 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
LINC02538-201ENST00000609107 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
LINC02538-201ENST00000609107 NUCB1Q02818 461 aa17.23■□□□□ 0.35
LINC02538-201ENST00000609107 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
LINC02538-201ENST00000609107 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
LINC02538-201ENST00000609107 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
LINC02538-201ENST00000609107 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
LINC02538-201ENST00000609107 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 RLBP1P12271 317 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 CPLX2Q6PUV4 134 aaKnown RBP17.22■□□□□ 0.35
LINC02538-201ENST00000609107 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
LINC02538-201ENST00000609107 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 AMOTL2Q9Y2J4 779 aa17.22■□□□□ 0.35
LINC02538-201ENST00000609107 CCDC173Q0VFZ6 552 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 ATP10AO60312 1499 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
LINC02538-201ENST00000609107 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
LINC02538-201ENST00000609107 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 PTPRTO14522 1441 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
LINC02538-201ENST00000609107 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
LINC02538-201ENST00000609107 BECN2A8MW95 431 aa17.21■□□□□ 0.34
LINC02538-201ENST00000609107 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.34
LINC02538-201ENST00000609107 BICD2Q8TD16 824 aa17.21■□□□□ 0.34
LINC02538-201ENST00000609107 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
LINC02538-201ENST00000609107 PDCP20941 246 aa17.2■□□□□ 0.34
LINC02538-201ENST00000609107 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
LINC02538-201ENST00000609107 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
LINC02538-201ENST00000609107 TOMM22Q9NS69 142 aa17.2■□□□□ 0.34
LINC02538-201ENST00000609107 ACEP12821 1306 aa17.2■□□□□ 0.34
LINC02538-201ENST00000609107 MX1P20591 662 aa17.2■□□□□ 0.34
LINC02538-201ENST00000609107 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
LINC02538-201ENST00000609107 TNRQ92752 1358 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 MRPL50Q8N5N7 158 aaKnown RBP17.19■□□□□ 0.34
LINC02538-201ENST00000609107 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
LINC02538-201ENST00000609107 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
LINC02538-201ENST00000609107 SMARCA5O60264 1052 aaPredicted RBP17.18■□□□□ 0.34
LINC02538-201ENST00000609107 FBLN1P23142 703 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms