RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 GBP2P32456 591 aaPredicted RBP15.45■□□□□ 0.06
USP6NL-205ENST00000609104 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
USP6NL-205ENST00000609104 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.45■□□□□ 0.06
USP6NL-205ENST00000609104 NLRP6P59044 892 aa15.45■□□□□ 0.06
USP6NL-205ENST00000609104 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
USP6NL-205ENST00000609104 CBFA2T2O43439 604 aa15.45■□□□□ 0.06
USP6NL-205ENST00000609104 TRIM22Q8IYM9 498 aa15.45■□□□□ 0.06
USP6NL-205ENST00000609104 ERLIN1O75477 346 aa15.44■□□□□ 0.06
USP6NL-205ENST00000609104 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
USP6NL-205ENST00000609104 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
USP6NL-205ENST00000609104 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
USP6NL-205ENST00000609104 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
USP6NL-205ENST00000609104 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
USP6NL-205ENST00000609104 DHX8Q14562 1220 aaKnown RBP15.44■□□□□ 0.06
USP6NL-205ENST00000609104 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
USP6NL-205ENST00000609104 KIAA1328Q86T90 577 aa15.43■□□□□ 0.06
USP6NL-205ENST00000609104 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
USP6NL-205ENST00000609104 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
USP6NL-205ENST00000609104 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
USP6NL-205ENST00000609104 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
USP6NL-205ENST00000609104 TXLNBQ8N3L3 684 aa15.43■□□□□ 0.06
USP6NL-205ENST00000609104 FKBP4Q02790 459 aaKnown RBP eCLIP15.42■□□□□ 0.06
USP6NL-205ENST00000609104 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
USP6NL-205ENST00000609104 MYL6BP14649 208 aa15.42■□□□□ 0.06
USP6NL-205ENST00000609104 TAF3Q5VWG9 929 aa15.42■□□□□ 0.06
USP6NL-205ENST00000609104 CFAP45Q9UL16 551 aa15.41■□□□□ 0.06
USP6NL-205ENST00000609104 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
USP6NL-205ENST00000609104 IQCEQ6IPM2 695 aa15.41■□□□□ 0.06
USP6NL-205ENST00000609104 CUX1P39880 1505 aa15.41■□□□□ 0.06
USP6NL-205ENST00000609104 CWC27Q6UX04 472 aaKnown RBP15.41■□□□□ 0.06
USP6NL-205ENST00000609104 NUP62CLQ9H1M0 184 aa15.4■□□□□ 0.06
USP6NL-205ENST00000609104 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
USP6NL-205ENST00000609104 PDE3AQ14432 1141 aa15.4■□□□□ 0.06
USP6NL-205ENST00000609104 PIBF1Q8WXW3 757 aa15.4■□□□□ 0.06
USP6NL-205ENST00000609104 BACH2Q9BYV9 841 aa15.4■□□□□ 0.06
USP6NL-205ENST00000609104 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.069e-6■■■■□ 21.7
USP6NL-205ENST00000609104 CHD1LQ86WJ1 897 aa15.4■□□□□ 0.06
USP6NL-205ENST00000609104 PLEKHO1Q53GL0 409 aaPredicted RBP15.4■□□□□ 0.06
USP6NL-205ENST00000609104 SSBP05455 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
USP6NL-205ENST00000609104 PDRG1Q9NUG6 133 aa15.39■□□□□ 0.05
USP6NL-205ENST00000609104 BLOC1S2Q6QNY1 142 aa15.39■□□□□ 0.05
USP6NL-205ENST00000609104 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
USP6NL-205ENST00000609104 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
USP6NL-205ENST00000609104 UPF3BQ9BZI7 483 aaKnown RBP15.39■□□□□ 0.05
USP6NL-205ENST00000609104 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
USP6NL-205ENST00000609104 HDGFL1Q5TGJ6 251 aa15.39■□□□□ 0.05
USP6NL-205ENST00000609104 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
USP6NL-205ENST00000609104 NOL7Q9UMY1 257 aaKnown RBP15.39■□□□□ 0.05
USP6NL-205ENST00000609104 NACAP1Q9BZK3 213 aa15.39■□□□□ 0.05
USP6NL-205ENST00000609104 CEP57L1Q8IYX8 460 aa15.38■□□□□ 0.05
USP6NL-205ENST00000609104 SSR1P43307 286 aaKnown RBP15.38■□□□□ 0.05
USP6NL-205ENST00000609104 CAMK4Q16566 473 aa15.38■□□□□ 0.05
USP6NL-205ENST00000609104 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
USP6NL-205ENST00000609104 EZRP15311 586 aaKnown RBP15.38■□□□□ 0.05
USP6NL-205ENST00000609104 MYOM3Q5VTT5 1437 aa15.38■□□□□ 0.05
USP6NL-205ENST00000609104 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
USP6NL-205ENST00000609104 USP8P40818 1118 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 SYCE3A1L190 88 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 PDCL2Q8N4E4 241 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 INCENPQ9NQS7 918 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 MCM4P33991 863 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 AACSQ86V21 672 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 PTPRGP23470 1445 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
USP6NL-205ENST00000609104 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
USP6NL-205ENST00000609104 DYDC1Q8WWB3 177 aa15.37■□□□□ 0.05
USP6NL-205ENST00000609104 ESPNB1AK53 854 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
USP6NL-205ENST00000609104 CFAP100Q494V2 611 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 STRN4Q9NRL3 753 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 RRP9O43818 475 aaKnown RBP15.36■□□□□ 0.05
USP6NL-205ENST00000609104 PRDM10Q9NQV6 1147 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 CASQ1P31415 396 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
USP6NL-205ENST00000609104 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
USP6NL-205ENST00000609104 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 ZNF397Q8NF99 534 aaPredicted RBP15.36■□□□□ 0.05
USP6NL-205ENST00000609104 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
USP6NL-205ENST00000609104 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP6NL-205ENST00000609104 CBX1P83916 185 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 TDO2P48775 406 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 SULT6B1Q6IMI4 303 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 UBXN4Q92575 508 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 CDKL5O76039 1030 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
USP6NL-205ENST00000609104 ESCO1Q5FWF5 840 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 ZSCAN25Q6NSZ9 544 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
USP6NL-205ENST00000609104 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 CABP4P57796 275 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 MAP3K11Q16584 847 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
USP6NL-205ENST00000609104 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
USP6NL-205ENST00000609104 ATF7IPQ6VMQ6 1270 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
USP6NL-205ENST00000609104 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms