RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 LRRC37A3O60309 1634 aa25.88■■□□□ 1.73
CCDC12-213ENST00000605875 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
CCDC12-213ENST00000605875 KCNH5Q8NCM2 988 aa25.88■■□□□ 1.73
CCDC12-213ENST00000605875 CPSF1Q10570 1443 aaKnown RBP25.88■■□□□ 1.73
CCDC12-213ENST00000605875 WDR17Q8IZU2 1322 aa25.88■■□□□ 1.73
CCDC12-213ENST00000605875 ARHGEF25Q86VW2 580 aa25.87■■□□□ 1.73
CCDC12-213ENST00000605875 SBF2Q86WG5 1849 aa25.86■■□□□ 1.73
CCDC12-213ENST00000605875 SOX12O15370 315 aa25.86■■□□□ 1.73
CCDC12-213ENST00000605875 TTC21AQ8NDW8 1320 aa25.86■■□□□ 1.73
CCDC12-213ENST00000605875 RGPD5Q99666 1765 aa25.85■■□□□ 1.73
CCDC12-213ENST00000605875 WNK3Q9BYP7 1800 aa25.84■■□□□ 1.73
CCDC12-213ENST00000605875 CSB-PGBD3P0DP91 1061 aa25.83■■□□□ 1.73
CCDC12-213ENST00000605875 CDCA7Q9BWT1 371 aaPredicted RBP25.83■■□□□ 1.73
CCDC12-213ENST00000605875 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
CCDC12-213ENST00000605875 PLSCR1O15162 318 aa25.82■■□□□ 1.72
CCDC12-213ENST00000605875 BCL11BQ9C0K0 894 aaPredicted RBP25.81■■□□□ 1.72
CCDC12-213ENST00000605875 RGPD3A6NKT7 1758 aaPredicted RBP25.8■■□□□ 1.72
CCDC12-213ENST00000605875 RGPD4Q7Z3J3 1758 aa25.8■■□□□ 1.72
CCDC12-213ENST00000605875 MARCH10Q8NA82 808 aaPredicted RBP25.8■■□□□ 1.72
CCDC12-213ENST00000605875 CARD10Q9BWT7 1032 aa25.8■■□□□ 1.72
CCDC12-213ENST00000605875 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
CCDC12-213ENST00000605875 SPON1Q9HCB6 807 aa25.79■■□□□ 1.72
CCDC12-213ENST00000605875 PTF1AQ7RTS3 328 aa25.78■■□□□ 1.72
CCDC12-213ENST00000605875 NFAT5O94916 1531 aa25.78■■□□□ 1.72
CCDC12-213ENST00000605875 KCNQ2O43526 872 aa25.77■■□□□ 1.72
CCDC12-213ENST00000605875 PPP1R1BQ9UD71 204 aaPredicted RBP25.76■■□□□ 1.71
CCDC12-213ENST00000605875 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
CCDC12-213ENST00000605875 MON2Q7Z3U7 1717 aa25.76■■□□□ 1.71
CCDC12-213ENST00000605875 BCL9O00512 1426 aa25.75■■□□□ 1.71
CCDC12-213ENST00000605875 EXOC5O00471 708 aa25.75■■□□□ 1.71
CCDC12-213ENST00000605875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.716e-6■■■■□ 20.4
CCDC12-213ENST00000605875 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
CCDC12-213ENST00000605875 ANO8Q9HCE9 1232 aaPredicted RBP25.73■■□□□ 1.71
CCDC12-213ENST00000605875 ABCC6O95255 1503 aa25.72■■□□□ 1.71
CCDC12-213ENST00000605875 USP31Q70CQ4 1352 aa25.71■■□□□ 1.71
CCDC12-213ENST00000605875 PROM2Q8N271 834 aa25.71■■□□□ 1.71
CCDC12-213ENST00000605875 NME9Q86XW9 330 aa25.7■■□□□ 1.7
CCDC12-213ENST00000605875 TMC1Q8TDI8 760 aa25.7■■□□□ 1.7
CCDC12-213ENST00000605875 CD163L1Q9NR16 1453 aa25.68■■□□□ 1.7
CCDC12-213ENST00000605875 HDGFL2Q7Z4V5 671 aaPredicted RBP25.68■■□□□ 1.7
CCDC12-213ENST00000605875 USP54Q70EL1 1684 aa25.68■■□□□ 1.7
CCDC12-213ENST00000605875 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
CCDC12-213ENST00000605875 TNS2Q63HR2 1409 aa25.66■■□□□ 1.7
CCDC12-213ENST00000605875 TXNRD1Q16881 649 aa25.66■■□□□ 1.7
CCDC12-213ENST00000605875 SLC12A5Q9H2X9 1139 aa25.66■■□□□ 1.7
CCDC12-213ENST00000605875 NLRP2Q9NX02 1062 aa25.66■■□□□ 1.7
CCDC12-213ENST00000605875 CASZ1Q86V15 1759 aa25.66■■□□□ 1.7
CCDC12-213ENST00000605875 ERBB3P21860 1342 aa25.65■■□□□ 1.7
CCDC12-213ENST00000605875 LTN1O94822 1766 aa25.65■■□□□ 1.7
CCDC12-213ENST00000605875 NINLQ9Y2I6 1382 aa25.65■■□□□ 1.7
CCDC12-213ENST00000605875 PDGFDQ9GZP0 370 aaPredicted RBP25.64■■□□□ 1.7
CCDC12-213ENST00000605875 DCAF8L1A6NGE4 600 aa25.63■■□□□ 1.69
CCDC12-213ENST00000605875 STK32BQ9NY57 414 aa25.63■■□□□ 1.69
CCDC12-213ENST00000605875 YY1P25490 414 aa25.62■■□□□ 1.69
CCDC12-213ENST00000605875 TERF2IPQ9NYB0 399 aa25.62■■□□□ 1.69
CCDC12-213ENST00000605875 EDC4Q6P2E9 1401 aaKnown RBP25.62■■□□□ 1.69
CCDC12-213ENST00000605875 IL2RBP14784 551 aa25.61■■□□□ 1.69
CCDC12-213ENST00000605875 ANKRD24Q8TF21 1146 aa25.61■■□□□ 1.69
CCDC12-213ENST00000605875 ACSBG1Q96GR2 724 aa25.61■■□□□ 1.69
CCDC12-213ENST00000605875 ZBTB7AO95365 584 aa25.6■■□□□ 1.69
CCDC12-213ENST00000605875 SLC15A2Q16348 729 aa25.6■■□□□ 1.69
CCDC12-213ENST00000605875 NHSQ6T4R5 1651 aa25.6■■□□□ 1.69
CCDC12-213ENST00000605875 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
CCDC12-213ENST00000605875 PUS7Q96PZ0 661 aaKnown RBP25.58■■□□□ 1.69
CCDC12-213ENST00000605875 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.69
CCDC12-213ENST00000605875 ATF5Q9Y2D1 282 aaPredicted RBP25.57■■□□□ 1.68
CCDC12-213ENST00000605875 USP47Q96K76 1375 aa25.56■■□□□ 1.68
CCDC12-213ENST00000605875 KAT6BQ8WYB5 2073 aa25.56■■□□□ 1.68
CCDC12-213ENST00000605875 ST20-MTHFSA0A0A6YYL1 179 aa25.56■■□□□ 1.68
CCDC12-213ENST00000605875 TESK2Q96S53 571 aa25.55■■□□□ 1.68
CCDC12-213ENST00000605875 PTGER2P43116 358 aa25.54■■□□□ 1.68
CCDC12-213ENST00000605875 MYOM1P52179 1685 aa25.53■■□□□ 1.68
CCDC12-213ENST00000605875 IP6K1Q92551 441 aa25.53■■□□□ 1.68
CCDC12-213ENST00000605875 BTAF1O14981 1849 aa25.51■■□□□ 1.67
CCDC12-213ENST00000605875 LTV1Q96GA3 475 aaPredicted RBP25.5■■□□□ 1.67
CCDC12-213ENST00000605875 MTFR1LQ9H019 292 aa25.5■■□□□ 1.67
CCDC12-213ENST00000605875 COG3Q96JB2 828 aa25.48■■□□□ 1.67
CCDC12-213ENST00000605875 DDX54Q8TDD1 881 aaKnown RBP25.47■■□□□ 1.67
CCDC12-213ENST00000605875 TIMELESSQ9UNS1 1208 aa25.47■■□□□ 1.67
CCDC12-213ENST00000605875 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
CCDC12-213ENST00000605875 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
CCDC12-213ENST00000605875 SLC24A1O60721 1099 aa25.45■■□□□ 1.66
CCDC12-213ENST00000605875 CCER1Q8TC90 406 aaPredicted RBP25.45■■□□□ 1.66
CCDC12-213ENST00000605875 FHDC1Q9C0D6 1143 aaPredicted RBP25.45■■□□□ 1.66
CCDC12-213ENST00000605875 MAP3K19Q56UN5 1328 aa25.44■■□□□ 1.66
CCDC12-213ENST00000605875 SGIP1Q9BQI5 828 aa25.44■■□□□ 1.66
CCDC12-213ENST00000605875 SYT17Q9BSW7 474 aa25.44■■□□□ 1.66
CCDC12-213ENST00000605875 LRRC4BQ9NT99 713 aa25.44■■□□□ 1.66
CCDC12-213ENST00000605875 FBLN1P23142 703 aa25.43■■□□□ 1.66
CCDC12-213ENST00000605875 HOXC9P31274 260 aa25.43■■□□□ 1.66
CCDC12-213ENST00000605875 AMPHP49418 695 aa25.43■■□□□ 1.66
CCDC12-213ENST00000605875 ZNF827Q17R98 1081 aa25.43■■□□□ 1.66
CCDC12-213ENST00000605875 TMF1P82094 1093 aa25.4■■□□□ 1.66
CCDC12-213ENST00000605875 RGPD2P0DJD1 1756 aa25.39■■□□□ 1.66
CCDC12-213ENST00000605875 SLC27A3Q5K4L6 730 aa25.39■■□□□ 1.66
CCDC12-213ENST00000605875 ARXQ96QS3 562 aa25.39■■□□□ 1.66
CCDC12-213ENST00000605875 ANKRD36BQ8N2N9 1353 aa25.39■■□□□ 1.65
CCDC12-213ENST00000605875 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
CCDC12-213ENST00000605875 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
CCDC12-213ENST00000605875 ZCRB1Q8TBF4 217 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms