RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
SRGAP2D-201ENST00000605551 SOX12O15370 315 aa12.79□□□□□ -0.36
SRGAP2D-201ENST00000605551 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
SRGAP2D-201ENST00000605551 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
SRGAP2D-201ENST00000605551 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
SRGAP2D-201ENST00000605551 ABCC6O95255 1503 aa12.78□□□□□ -0.36
SRGAP2D-201ENST00000605551 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
SRGAP2D-201ENST00000605551 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
SRGAP2D-201ENST00000605551 RREB1Q92766 1687 aa12.77□□□□□ -0.36
SRGAP2D-201ENST00000605551 WNK3Q9BYP7 1800 aa12.77□□□□□ -0.37
SRGAP2D-201ENST00000605551 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
SRGAP2D-201ENST00000605551 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
SRGAP2D-201ENST00000605551 TERF2IPQ9NYB0 399 aa12.76□□□□□ -0.37
SRGAP2D-201ENST00000605551 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
SRGAP2D-201ENST00000605551 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
SRGAP2D-201ENST00000605551 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
SRGAP2D-201ENST00000605551 COL18A1P39060 1754 aa12.75□□□□□ -0.37
SRGAP2D-201ENST00000605551 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
SRGAP2D-201ENST00000605551 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
SRGAP2D-201ENST00000605551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRGAP2D-201ENST00000605551 CARD10Q9BWT7 1032 aa12.75□□□□□ -0.37
SRGAP2D-201ENST00000605551 NFAT5O94916 1531 aa12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 EXOC5O00471 708 aa12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 RGPD5Q99666 1765 aa12.73□□□□□ -0.37
SRGAP2D-201ENST00000605551 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 USP31Q70CQ4 1352 aa12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 SBF2Q86WG5 1849 aa12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
SRGAP2D-201ENST00000605551 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.37
SRGAP2D-201ENST00000605551 PLSCR1O15162 318 aa12.71□□□□□ -0.37
SRGAP2D-201ENST00000605551 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
SRGAP2D-201ENST00000605551 LTN1O94822 1766 aa12.71□□□□□ -0.38
SRGAP2D-201ENST00000605551 BCL9O00512 1426 aa12.71□□□□□ -0.38
SRGAP2D-201ENST00000605551 TNS2Q63HR2 1409 aa12.71□□□□□ -0.38
SRGAP2D-201ENST00000605551 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
SRGAP2D-201ENST00000605551 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
SRGAP2D-201ENST00000605551 ERBB3P21860 1342 aa12.69□□□□□ -0.38
SRGAP2D-201ENST00000605551 NME9Q86XW9 330 aa12.69□□□□□ -0.38
SRGAP2D-201ENST00000605551 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
SRGAP2D-201ENST00000605551 IL2RBP14784 551 aa12.68□□□□□ -0.38
SRGAP2D-201ENST00000605551 MARCH10Q8NA82 808 aaPredicted RBP12.68□□□□□ -0.38
SRGAP2D-201ENST00000605551 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
SRGAP2D-201ENST00000605551 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
SRGAP2D-201ENST00000605551 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
SRGAP2D-201ENST00000605551 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
SRGAP2D-201ENST00000605551 CD163L1Q9NR16 1453 aa12.66□□□□□ -0.38
SRGAP2D-201ENST00000605551 KCNQ2O43526 872 aa12.66□□□□□ -0.38
SRGAP2D-201ENST00000605551 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
SRGAP2D-201ENST00000605551 COG3Q96JB2 828 aa12.66□□□□□ -0.38
SRGAP2D-201ENST00000605551 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
SRGAP2D-201ENST00000605551 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
SRGAP2D-201ENST00000605551 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
SRGAP2D-201ENST00000605551 TMF1P82094 1093 aa12.64□□□□□ -0.39
SRGAP2D-201ENST00000605551 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
SRGAP2D-201ENST00000605551 AMPHP49418 695 aa12.63□□□□□ -0.39
SRGAP2D-201ENST00000605551 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
SRGAP2D-201ENST00000605551 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
SRGAP2D-201ENST00000605551 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
SRGAP2D-201ENST00000605551 IP6K1Q92551 441 aa12.62□□□□□ -0.39
SRGAP2D-201ENST00000605551 USP47Q96K76 1375 aa12.61□□□□□ -0.39
SRGAP2D-201ENST00000605551 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
SRGAP2D-201ENST00000605551 ACSBG1Q96GR2 724 aa12.61□□□□□ -0.39
SRGAP2D-201ENST00000605551 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
SRGAP2D-201ENST00000605551 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
SRGAP2D-201ENST00000605551 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
SRGAP2D-201ENST00000605551 TESK2Q96S53 571 aa12.6□□□□□ -0.39
SRGAP2D-201ENST00000605551 CASZ1Q86V15 1759 aa12.6□□□□□ -0.39
SRGAP2D-201ENST00000605551 BTAF1O14981 1849 aa12.59□□□□□ -0.39
SRGAP2D-201ENST00000605551 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
SRGAP2D-201ENST00000605551 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
SRGAP2D-201ENST00000605551 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
SRGAP2D-201ENST00000605551 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
SRGAP2D-201ENST00000605551 YY1P25490 414 aa12.57□□□□□ -0.4
SRGAP2D-201ENST00000605551 HOXC9P31274 260 aa12.57□□□□□ -0.4
SRGAP2D-201ENST00000605551 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
SRGAP2D-201ENST00000605551 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
SRGAP2D-201ENST00000605551 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 PROM2Q8N271 834 aa12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 SYTL4Q96C24 671 aaPredicted RBP12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
SRGAP2D-201ENST00000605551 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
SRGAP2D-201ENST00000605551 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
SRGAP2D-201ENST00000605551 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
SRGAP2D-201ENST00000605551 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
SRGAP2D-201ENST00000605551 MYOM1P52179 1685 aa12.54□□□□□ -0.4
SRGAP2D-201ENST00000605551 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
SRGAP2D-201ENST00000605551 DOT1LQ8TEK3 1739 aa12.54□□□□□ -0.4
SRGAP2D-201ENST00000605551 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
SRGAP2D-201ENST00000605551 FLT4P35916 1363 aa12.53□□□□□ -0.4
SRGAP2D-201ENST00000605551 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
SRGAP2D-201ENST00000605551 POLD1P28340 1107 aa12.52□□□□□ -0.41
SRGAP2D-201ENST00000605551 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms