RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 CCDC158Q5M9N0 1113 aa24.99■■□□□ 1.59
SH3D19-211ENST00000604030 RBM33Q96EV2 1170 aaKnown RBP24.99■■□□□ 1.59
SH3D19-211ENST00000604030 ODF2Q5BJF6 829 aa24.99■■□□□ 1.59
SH3D19-211ENST00000604030 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
SH3D19-211ENST00000604030 TSR2Q969E8 191 aaKnown RBP24.99■■□□□ 1.59
SH3D19-211ENST00000604030 HDGFL1Q5TGJ6 251 aa24.99■■□□□ 1.59
SH3D19-211ENST00000604030 ABCC11Q96J66 1382 aa24.99■■□□□ 1.59
SH3D19-211ENST00000604030 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 CEP57L1Q8IYX8 460 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 PATL2C9JE40 543 aaKnown RBP24.98■■□□□ 1.59
SH3D19-211ENST00000604030 PPFIBP1Q86W92 1011 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 TRIM22Q8IYM9 498 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 SLC52A1Q9NWF4 448 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 NLRP2Q9NX02 1062 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 SERPINC1P01008 464 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 LARP1BQ659C4 914 aaKnown RBP24.98■■□□□ 1.59
SH3D19-211ENST00000604030 IL27Q8NEV9 243 aa24.98■■□□□ 1.59
SH3D19-211ENST00000604030 CDKL5O76039 1030 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 DNAJC2Q99543 621 aaKnown RBP24.97■■□□□ 1.59
SH3D19-211ENST00000604030 RAD21O60216 631 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 ZSCAN25Q6NSZ9 544 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 CALRP27797 417 aaKnown RBP24.97■■□□□ 1.59
SH3D19-211ENST00000604030 STIM1Q13586 685 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 C1orf115Q9H7X2 142 aa24.97■■□□□ 1.59
SH3D19-211ENST00000604030 BLOC1S2Q6QNY1 142 aa24.96■■□□□ 1.59
SH3D19-211ENST00000604030 NUP62CLQ9H1M0 184 aa24.95■■□□□ 1.59
SH3D19-211ENST00000604030 ERLIN2O94905 339 aa24.95■■□□□ 1.58
SH3D19-211ENST00000604030 CTNNA3Q9UI47 895 aa24.94■■□□□ 1.58
SH3D19-211ENST00000604030 UQCRHLA0A096LP55 91 aa24.94■■□□□ 1.58
SH3D19-211ENST00000604030 UQCRHP07919 91 aa24.94■■□□□ 1.58
SH3D19-211ENST00000604030 SMTNL1A8MU46 457 aa24.94■■□□□ 1.58
SH3D19-211ENST00000604030 SLC12A5Q9H2X9 1139 aa24.94■■□□□ 1.58
SH3D19-211ENST00000604030 IQCEQ6IPM2 695 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 NACAP1Q9BZK3 213 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 ME1P48163 572 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 CDK5RAP3Q96JB5 506 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 FMNL2Q96PY5 1086 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 PRAM1Q96QH2 718 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 SPC24Q8NBT2 197 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
SH3D19-211ENST00000604030 KIF6Q6ZMV9 814 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 SPATA32Q96LK8 384 aa24.93■■□□□ 1.58
SH3D19-211ENST00000604030 ATF3P18847 181 aa24.92■■□□□ 1.58
SH3D19-211ENST00000604030 ALDH1L2Q3SY69 923 aa24.92■■□□□ 1.58
SH3D19-211ENST00000604030 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.586e-7■■■■□ 22.4
SH3D19-211ENST00000604030 PDRG1Q9NUG6 133 aa24.92■■□□□ 1.58
SH3D19-211ENST00000604030 HSP90AB2PQ58FF8 381 aa24.92■■□□□ 1.58
SH3D19-211ENST00000604030 TAF3Q5VWG9 929 aa24.92■■□□□ 1.58
SH3D19-211ENST00000604030 GNL3LQ9NVN8 582 aaKnown RBP24.92■■□□□ 1.58
SH3D19-211ENST00000604030 CCAR1Q8IX12 1150 aaKnown RBP24.91■■□□□ 1.58
SH3D19-211ENST00000604030 TTC39AQ5SRH9 613 aa24.91■■□□□ 1.58
SH3D19-211ENST00000604030 NAIPQ13075 1403 aa24.9■■□□□ 1.58
SH3D19-211ENST00000604030 NOL7Q9UMY1 257 aaKnown RBP24.9■■□□□ 1.58
SH3D19-211ENST00000604030 SULT6B1Q6IMI4 303 aa24.9■■□□□ 1.58
SH3D19-211ENST00000604030 AXDND1Q5T1B0 1012 aaPredicted RBP24.89■■□□□ 1.58
SH3D19-211ENST00000604030 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.58
SH3D19-211ENST00000604030 GOLGA6L10A6NI86 522 aa24.89■■□□□ 1.58
SH3D19-211ENST00000604030 MAP3K1Q13233 1512 aa24.89■■□□□ 1.58
SH3D19-211ENST00000604030 NFE2L2Q16236 605 aa24.89■■□□□ 1.58
SH3D19-211ENST00000604030 ABTB2Q8N961 1025 aa24.89■■□□□ 1.57
SH3D19-211ENST00000604030 SYTL4Q96C24 671 aaPredicted RBP24.89■■□□□ 1.57
SH3D19-211ENST00000604030 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
SH3D19-211ENST00000604030 CDK19Q9BWU1 502 aa24.88■■□□□ 1.57
SH3D19-211ENST00000604030 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SH3D19-211ENST00000604030 MAP3K11Q16584 847 aa24.88■■□□□ 1.57
SH3D19-211ENST00000604030 RBM10P98175 930 aaKnown RBP24.87■■□□□ 1.57
SH3D19-211ENST00000604030 WASF1Q92558 559 aa24.87■■□□□ 1.57
SH3D19-211ENST00000604030 RAB11FIP3O75154 756 aa24.87■■□□□ 1.57
SH3D19-211ENST00000604030 TATP17735 454 aaPredicted RBP24.86■■□□□ 1.57
SH3D19-211ENST00000604030 USP8P40818 1118 aa24.86■■□□□ 1.57
SH3D19-211ENST00000604030 TTLL5Q6EMB2 1281 aa24.85■■□□□ 1.57
SH3D19-211ENST00000604030 KIAA0754O94854 1291 aa24.85■■□□□ 1.57
SH3D19-211ENST00000604030 UPF3BQ9BZI7 483 aaKnown RBP24.85■■□□□ 1.57
SH3D19-211ENST00000604030 GBP3Q9H0R5 595 aa24.85■■□□□ 1.57
SH3D19-211ENST00000604030 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
SH3D19-211ENST00000604030 TSPYL1Q9H0U9 437 aa24.85■■□□□ 1.57
SH3D19-211ENST00000604030 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
SH3D19-211ENST00000604030 SH2B1Q9NRF2 756 aaPredicted RBP24.84■■□□□ 1.57
SH3D19-211ENST00000604030 JAKMIP1Q96N16 626 aaKnown RBP24.83■■□□□ 1.57
SH3D19-211ENST00000604030 MCM5P33992 734 aa24.83■■□□□ 1.57
SH3D19-211ENST00000604030 SYCP1Q15431 976 aa24.83■■□□□ 1.57
SH3D19-211ENST00000604030 GOLGA6L7A0A1B0GV03 622 aa24.83■■□□□ 1.57
SH3D19-211ENST00000604030 CCDC69A6NI79 296 aa24.83■■□□□ 1.57
SH3D19-211ENST00000604030 PKNOX2Q96KN3 472 aa24.83■■□□□ 1.57
SH3D19-211ENST00000604030 ATP2B1P20020 1258 aa24.83■■□□□ 1.56
SH3D19-211ENST00000604030 SCAND2PQ9GZW5 306 aaPredicted RBP24.83■■□□□ 1.56
SH3D19-211ENST00000604030 CABP1Q9NZU7 370 aa24.83■■□□□ 1.56
SH3D19-211ENST00000604030 CEBPZQ03701 1054 aaKnown RBP24.82■■□□□ 1.56
SH3D19-211ENST00000604030 CCDC181Q5TID7 509 aa24.82■■□□□ 1.56
SH3D19-211ENST00000604030 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
SH3D19-211ENST00000604030 FYB1O15117 783 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 CCDC183Q5T5S1 534 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 TMEM57Q8N5G2 664 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 SRGAP3O43295 1099 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 CCDC57Q2TAC2 916 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 BRPF1P55201 1214 aaPredicted RBP24.81■■□□□ 1.56
SH3D19-211ENST00000604030 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms