RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 MAP3K19Q56UN5 1328 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 CRB1P82279 1406 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 VPS72Q15906 364 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 INSRP06213 1382 aa12.91□□□□□ -0.34
SQSTM1P1-201ENST00000603451 GLI3P10071 1580 aa12.9□□□□□ -0.34
SQSTM1P1-201ENST00000603451 IP6K1Q92551 441 aa12.9□□□□□ -0.34
SQSTM1P1-201ENST00000603451 ERBB3P21860 1342 aa12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 WDR17Q8IZU2 1322 aa12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
SQSTM1P1-201ENST00000603451 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
SQSTM1P1-201ENST00000603451 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
SQSTM1P1-201ENST00000603451 CHRNA2Q15822 529 aa12.88□□□□□ -0.35
SQSTM1P1-201ENST00000603451 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
SQSTM1P1-201ENST00000603451 SOX12O15370 315 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 HOXC9P31274 260 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 AMPHP49418 695 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 NCAPD2Q15021 1401 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 SPATA31A5Q5VU36 1347 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 SPATA31A7Q8IWB4 1347 aa12.87□□□□□ -0.35
SQSTM1P1-201ENST00000603451 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
SQSTM1P1-201ENST00000603451 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
SQSTM1P1-201ENST00000603451 QTRT2Q9H974 415 aaKnown RBP12.86□□□□□ -0.35
SQSTM1P1-201ENST00000603451 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RXRBP28702 533 aa12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 EVA1CP58658 441 aa12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
SQSTM1P1-201ENST00000603451 RALBP1Q15311 655 aa12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
SQSTM1P1-201ENST00000603451 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
SQSTM1P1-201ENST00000603451 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
SQSTM1P1-201ENST00000603451 RGS12O14924 1447 aa12.82□□□□□ -0.36
SQSTM1P1-201ENST00000603451 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
SQSTM1P1-201ENST00000603451 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
SQSTM1P1-201ENST00000603451 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
SQSTM1P1-201ENST00000603451 CSB-PGBD3P0DP91 1061 aa12.81□□□□□ -0.36
SQSTM1P1-201ENST00000603451 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
SQSTM1P1-201ENST00000603451 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
SQSTM1P1-201ENST00000603451 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
SQSTM1P1-201ENST00000603451 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
SQSTM1P1-201ENST00000603451 TNNT2P45379 298 aaPredicted RBP12.8□□□□□ -0.36
SQSTM1P1-201ENST00000603451 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
SQSTM1P1-201ENST00000603451 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
SQSTM1P1-201ENST00000603451 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
SQSTM1P1-201ENST00000603451 BRWD3Q6RI45 1802 aa12.79□□□□□ -0.36
SQSTM1P1-201ENST00000603451 FBLN1P23142 703 aa12.79□□□□□ -0.36
SQSTM1P1-201ENST00000603451 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
SQSTM1P1-201ENST00000603451 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 MTHFSP49914 203 aa12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 KDRP35968 1356 aa12.78□□□□□ -0.36
SQSTM1P1-201ENST00000603451 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1P1-201ENST00000603451 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
SQSTM1P1-201ENST00000603451 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
SQSTM1P1-201ENST00000603451 BCL9O00512 1426 aa12.76□□□□□ -0.37
SQSTM1P1-201ENST00000603451 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
SQSTM1P1-201ENST00000603451 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
SQSTM1P1-201ENST00000603451 IL2RBP14784 551 aa12.75□□□□□ -0.37
SQSTM1P1-201ENST00000603451 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
SQSTM1P1-201ENST00000603451 MEGF6O75095 1541 aa12.74□□□□□ -0.37
SQSTM1P1-201ENST00000603451 IL13P35225 146 aa12.74□□□□□ -0.37
SQSTM1P1-201ENST00000603451 SEPT12Q8IYM1 358 aa12.74□□□□□ -0.37
SQSTM1P1-201ENST00000603451 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 LTV1Q96GA3 475 aaPredicted RBP12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
SQSTM1P1-201ENST00000603451 ANP32CO43423 234 aa12.72□□□□□ -0.37
SQSTM1P1-201ENST00000603451 DDB1Q16531 1140 aa12.72□□□□□ -0.37
SQSTM1P1-201ENST00000603451 EYA1Q99502 592 aa12.72□□□□□ -0.37
SQSTM1P1-201ENST00000603451 A0A0G2JS52 829 aa12.71□□□□□ -0.37
SQSTM1P1-201ENST00000603451 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
SQSTM1P1-201ENST00000603451 MYT1Q01538 1121 aa12.71□□□□□ -0.37
SQSTM1P1-201ENST00000603451 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.37
SQSTM1P1-201ENST00000603451 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
SQSTM1P1-201ENST00000603451 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
SQSTM1P1-201ENST00000603451 EXOC5O00471 708 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms