RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
SFXN2-208ENST00000602660 RGPD2P0DJD1 1756 aa22.4■■□□□ 1.18
SFXN2-208ENST00000602660 ANKRD36BQ8N2N9 1353 aa22.4■■□□□ 1.18
SFXN2-208ENST00000602660 KRT27Q7Z3Y8 459 aa22.4■■□□□ 1.18
SFXN2-208ENST00000602660 KCNH5Q8NCM2 988 aa22.4■■□□□ 1.18
SFXN2-208ENST00000602660 LRRC37A3O60309 1634 aa22.39■■□□□ 1.18
SFXN2-208ENST00000602660 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
SFXN2-208ENST00000602660 SOX12O15370 315 aa22.38■■□□□ 1.17
SFXN2-208ENST00000602660 EVA1CP58658 441 aa22.38■■□□□ 1.17
SFXN2-208ENST00000602660 CRB1P82279 1406 aa22.38■■□□□ 1.17
SFXN2-208ENST00000602660 A0A0G2JS52 829 aa22.36■■□□□ 1.17
SFXN2-208ENST00000602660 MYT1Q01538 1121 aa22.36■■□□□ 1.17
SFXN2-208ENST00000602660 BARGINQ6ZT62 677 aa22.36■■□□□ 1.17
SFXN2-208ENST00000602660 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
SFXN2-208ENST00000602660 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
SFXN2-208ENST00000602660 PEAK1Q9H792 1746 aa22.36■■□□□ 1.17
SFXN2-208ENST00000602660 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
SFXN2-208ENST00000602660 MAP2P11137 1827 aaKnown RBP22.34■■□□□ 1.17
SFXN2-208ENST00000602660 TCP11L2Q8N4U5 519 aa22.34■■□□□ 1.17
SFXN2-208ENST00000602660 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
SFXN2-208ENST00000602660 KAT6BQ8WYB5 2073 aa22.34■■□□□ 1.17
SFXN2-208ENST00000602660 CCDC125Q86Z20 511 aa22.33■■□□□ 1.17
SFXN2-208ENST00000602660 WDR17Q8IZU2 1322 aa22.32■■□□□ 1.16
SFXN2-208ENST00000602660 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
SFXN2-208ENST00000602660 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
SFXN2-208ENST00000602660 THRAP3Q9Y2W1 955 aaKnown RBP22.31■■□□□ 1.16
SFXN2-208ENST00000602660 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
SFXN2-208ENST00000602660 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
SFXN2-208ENST00000602660 DISP2A7MBM2 1401 aa22.28■■□□□ 1.16
SFXN2-208ENST00000602660 FYB1O15117 783 aa22.27■■□□□ 1.16
SFXN2-208ENST00000602660 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
SFXN2-208ENST00000602660 CARD14Q9BXL6 1004 aa22.27■■□□□ 1.16
SFXN2-208ENST00000602660 ERBB3P21860 1342 aa22.26■■□□□ 1.15
SFXN2-208ENST00000602660 DEFB132Q7Z7B7 95 aa22.25■■□□□ 1.15
SFXN2-208ENST00000602660 FBLN1P23142 703 aa22.24■■□□□ 1.15
SFXN2-208ENST00000602660 COG3Q96JB2 828 aa22.24■■□□□ 1.15
SFXN2-208ENST00000602660 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
SFXN2-208ENST00000602660 RREB1Q92766 1687 aa22.23■■□□□ 1.15
SFXN2-208ENST00000602660 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
SFXN2-208ENST00000602660 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
SFXN2-208ENST00000602660 GGNBP2Q9H3C7 697 aa22.22■■□□□ 1.15
SFXN2-208ENST00000602660 MAP3K19Q56UN5 1328 aa22.22■■□□□ 1.15
SFXN2-208ENST00000602660 RGPD3A6NKT7 1758 aaPredicted RBP22.2■■□□□ 1.14
SFXN2-208ENST00000602660 RGPD4Q7Z3J3 1758 aa22.2■■□□□ 1.14
SFXN2-208ENST00000602660 CSB-PGBD3P0DP91 1061 aa22.2■■□□□ 1.14
SFXN2-208ENST00000602660 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.14
SFXN2-208ENST00000602660 IP6K1Q92551 441 aa22.2■■□□□ 1.14
SFXN2-208ENST00000602660 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
SFXN2-208ENST00000602660 C11orf95C9JLR9 678 aaPredicted RBP22.19■■□□□ 1.14
SFXN2-208ENST00000602660 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
SFXN2-208ENST00000602660 NUP188Q5SRE5 1749 aa22.19■■□□□ 1.14
SFXN2-208ENST00000602660 ANKRD24Q8TF21 1146 aa22.18■■□□□ 1.14
SFXN2-208ENST00000602660 SF3B2Q13435 895 aaKnown RBP22.17■■□□□ 1.14
SFXN2-208ENST00000602660 OVOS2A0A0G2JMS6 1433 aa22.16■■□□□ 1.14
SFXN2-208ENST00000602660 TNS2Q63HR2 1409 aa22.16■■□□□ 1.14
SFXN2-208ENST00000602660 HOXC9P31274 260 aa22.16■■□□□ 1.14
SFXN2-208ENST00000602660 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
SFXN2-208ENST00000602660 TRIM37O94972 964 aa22.15■■□□□ 1.14
SFXN2-208ENST00000602660 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
SFXN2-208ENST00000602660 DDB1Q16531 1140 aa22.15■■□□□ 1.14
SFXN2-208ENST00000602660 CDCA7Q9BWT1 371 aaPredicted RBP22.15■■□□□ 1.14
SFXN2-208ENST00000602660 NHSQ6T4R5 1651 aa22.14■■□□□ 1.14
SFXN2-208ENST00000602660 BAG6P46379 1132 aa22.14■■□□□ 1.13
SFXN2-208ENST00000602660 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.13
SFXN2-208ENST00000602660 NLRP2Q9NX02 1062 aa22.14■■□□□ 1.13
SFXN2-208ENST00000602660 MARCH10Q8NA82 808 aaPredicted RBP22.13■■□□□ 1.13
SFXN2-208ENST00000602660 BCL9O00512 1426 aa22.13■■□□□ 1.13
SFXN2-208ENST00000602660 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
SFXN2-208ENST00000602660 BTAF1O14981 1849 aa22.11■■□□□ 1.13
SFXN2-208ENST00000602660 AMPHP49418 695 aa22.11■■□□□ 1.13
SFXN2-208ENST00000602660 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
SFXN2-208ENST00000602660 CGNL1Q0VF96 1302 aa22.09■■□□□ 1.13
SFXN2-208ENST00000602660 SRCAPQ6ZRS2 3230 aa22.08■■□□□ 1.13
SFXN2-208ENST00000602660 CAMKK2Q96RR4 588 aa22.08■■□□□ 1.13
SFXN2-208ENST00000602660 PANK3Q9H999 370 aa22.08■■□□□ 1.13
SFXN2-208ENST00000602660 KIF24Q5T7B8 1368 aa22.08■■□□□ 1.12
SFXN2-208ENST00000602660 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
SFXN2-208ENST00000602660 IL2RBP14784 551 aa22.07■■□□□ 1.12
SFXN2-208ENST00000602660 INSRP06213 1382 aa22.07■■□□□ 1.12
SFXN2-208ENST00000602660 FLT4P35916 1363 aa22.07■■□□□ 1.12
SFXN2-208ENST00000602660 KIF7Q2M1P5 1343 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 MEGF6O75095 1541 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 EXOC5O00471 708 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 EZH2Q15910 746 aaKnown RBP22.06■■□□□ 1.12
SFXN2-208ENST00000602660 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
SFXN2-208ENST00000602660 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
SFXN2-208ENST00000602660 APBA3O96018 575 aa22.04■■□□□ 1.12
SFXN2-208ENST00000602660 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
SFXN2-208ENST00000602660 ITGB4P16144 1822 aa22.02■■□□□ 1.12
SFXN2-208ENST00000602660 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
SFXN2-208ENST00000602660 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
SFXN2-208ENST00000602660 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
SFXN2-208ENST00000602660 NSD2O96028 1365 aa22■■□□□ 1.11
SFXN2-208ENST00000602660 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
SFXN2-208ENST00000602660 LRP5O75197 1615 aa22■■□□□ 1.11
SFXN2-208ENST00000602660 BCL11BQ9C0K0 894 aaPredicted RBP21.99■■□□□ 1.11
SFXN2-208ENST00000602660 POLKQ9UBT6 870 aa21.99■■□□□ 1.11
SFXN2-208ENST00000602660 LY75O60449 1722 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms