RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 WDR17Q8IZU2 1322 aa20.63■□□□□ 0.89
HCG18-245ENST00000602550 PTGER2P43116 358 aa20.63■□□□□ 0.89
HCG18-245ENST00000602550 PTF1AQ7RTS3 328 aa20.63■□□□□ 0.89
HCG18-245ENST00000602550 MARCH10Q8NA82 808 aaPredicted RBP20.63■□□□□ 0.89
HCG18-245ENST00000602550 PDGFDQ9GZP0 370 aaPredicted RBP20.63■□□□□ 0.89
HCG18-245ENST00000602550 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
HCG18-245ENST00000602550 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
HCG18-245ENST00000602550 CENPJQ9HC77 1338 aaPredicted RBP20.62■□□□□ 0.89
HCG18-245ENST00000602550 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 TXNRD1Q16881 649 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 CABP1Q9NZU7 370 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 SLIT3O75094 1523 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 AKAP12Q02952 1782 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 USP6P35125 1406 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 CHD4Q14839 1912 aa20.61■□□□□ 0.89
HCG18-245ENST00000602550 NBPF1Q3BBV0 1214 aa20.6■□□□□ 0.89
HCG18-245ENST00000602550 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
HCG18-245ENST00000602550 COL18A1P39060 1754 aa20.59■□□□□ 0.89
HCG18-245ENST00000602550 EXOC5O00471 708 aa20.59■□□□□ 0.89
HCG18-245ENST00000602550 MTFR1LQ9H019 292 aa20.59■□□□□ 0.89
HCG18-245ENST00000602550 AXIN2Q9Y2T1 843 aa20.59■□□□□ 0.89
HCG18-245ENST00000602550 MYOM1P52179 1685 aa20.58■□□□□ 0.89
HCG18-245ENST00000602550 WNK3Q9BYP7 1800 aa20.58■□□□□ 0.89
HCG18-245ENST00000602550 KCNH5Q8NCM2 988 aa20.58■□□□□ 0.89
HCG18-245ENST00000602550 CARD10Q9BWT7 1032 aa20.58■□□□□ 0.89
HCG18-245ENST00000602550 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.89
HCG18-245ENST00000602550 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
HCG18-245ENST00000602550 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
HCG18-245ENST00000602550 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
HCG18-245ENST00000602550 ZNF692Q9BU19 519 aaPredicted RBP20.55■□□□□ 0.88
HCG18-245ENST00000602550 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
HCG18-245ENST00000602550 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
HCG18-245ENST00000602550 KAT6BQ8WYB5 2073 aa20.52■□□□□ 0.88
HCG18-245ENST00000602550 RGPD5Q99666 1765 aa20.52■□□□□ 0.88
HCG18-245ENST00000602550 SENP3-EIF4A1A0A087X0R7 540 aa20.52■□□□□ 0.88
HCG18-245ENST00000602550 ARXQ96QS3 562 aa20.52■□□□□ 0.88
HCG18-245ENST00000602550 UTRNP46939 3433 aa20.52■□□□□ 0.88
HCG18-245ENST00000602550 EVC2Q86UK5 1308 aa20.52■□□□□ 0.87
HCG18-245ENST00000602550 PIK3C2AO00443 1686 aa20.51■□□□□ 0.87
HCG18-245ENST00000602550 C1QTNF8P60827 252 aa20.51■□□□□ 0.87
HCG18-245ENST00000602550 QRICH2Q9H0J4 1663 aa20.51■□□□□ 0.87
HCG18-245ENST00000602550 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
HCG18-245ENST00000602550 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
HCG18-245ENST00000602550 SOX12O15370 315 aa20.48■□□□□ 0.87
HCG18-245ENST00000602550 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
HCG18-245ENST00000602550 TNS2Q63HR2 1409 aa20.46■□□□□ 0.87
HCG18-245ENST00000602550 GPR162Q16538 588 aa20.45■□□□□ 0.86
HCG18-245ENST00000602550 ACSBG1Q96GR2 724 aa20.45■□□□□ 0.86
HCG18-245ENST00000602550 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
HCG18-245ENST00000602550 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
HCG18-245ENST00000602550 ABCC6O95255 1503 aa20.44■□□□□ 0.86
HCG18-245ENST00000602550 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
HCG18-245ENST00000602550 IL2RBP14784 551 aa20.41■□□□□ 0.86
HCG18-245ENST00000602550 NLRP2Q9NX02 1062 aa20.41■□□□□ 0.86
HCG18-245ENST00000602550 NFAT5O94916 1531 aa20.41■□□□□ 0.86
HCG18-245ENST00000602550 POLD1P28340 1107 aa20.4■□□□□ 0.86
HCG18-245ENST00000602550 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
HCG18-245ENST00000602550 PAPPAQ13219 1627 aa20.39■□□□□ 0.86
HCG18-245ENST00000602550 ERBB3P21860 1342 aa20.39■□□□□ 0.85
HCG18-245ENST00000602550 BTAF1O14981 1849 aa20.39■□□□□ 0.85
HCG18-245ENST00000602550 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
HCG18-245ENST00000602550 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
HCG18-245ENST00000602550 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
HCG18-245ENST00000602550 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
HCG18-245ENST00000602550 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
HCG18-245ENST00000602550 USP31Q70CQ4 1352 aa20.35■□□□□ 0.85
HCG18-245ENST00000602550 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
HCG18-245ENST00000602550 QSER1Q2KHR3 1735 aa20.33■□□□□ 0.85
HCG18-245ENST00000602550 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
HCG18-245ENST00000602550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■■■■□ 21.3
HCG18-245ENST00000602550 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
HCG18-245ENST00000602550 ANKRD24Q8TF21 1146 aa20.33■□□□□ 0.85
HCG18-245ENST00000602550 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.85
HCG18-245ENST00000602550 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
HCG18-245ENST00000602550 LTN1O94822 1766 aa20.31■□□□□ 0.84
HCG18-245ENST00000602550 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
HCG18-245ENST00000602550 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
HCG18-245ENST00000602550 GRIN3BO60391 1043 aa20.3■□□□□ 0.84
HCG18-245ENST00000602550 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
HCG18-245ENST00000602550 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
HCG18-245ENST00000602550 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
HCG18-245ENST00000602550 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
HCG18-245ENST00000602550 NME9Q86XW9 330 aa20.28■□□□□ 0.84
HCG18-245ENST00000602550 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
HCG18-245ENST00000602550 SBNO2Q9Y2G9 1366 aa20.25■□□□□ 0.83
HCG18-245ENST00000602550 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
HCG18-245ENST00000602550 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
HCG18-245ENST00000602550 TMC1Q8TDI8 760 aa20.24■□□□□ 0.83
HCG18-245ENST00000602550 IP6K1Q92551 441 aa20.24■□□□□ 0.83
HCG18-245ENST00000602550 PRIM1P49642 420 aaKnown RBP20.23■□□□□ 0.83
HCG18-245ENST00000602550 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
HCG18-245ENST00000602550 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
HCG18-245ENST00000602550 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
HCG18-245ENST00000602550 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
HCG18-245ENST00000602550 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
HCG18-245ENST00000602550 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
HCG18-245ENST00000602550 KCNQ4P56696 695 aa20.21■□□□□ 0.83
HCG18-245ENST00000602550 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
HCG18-245ENST00000602550 CD163L1Q9NR16 1453 aa20.21■□□□□ 0.83
HCG18-245ENST00000602550 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms