RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
SCN1B-205ENST00000602150 TECPR2O15040 1411 aa13.97□□□□□ -0.17
SCN1B-205ENST00000602150 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
SCN1B-205ENST00000602150 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.17
SCN1B-205ENST00000602150 RGPD8O14715 1765 aaPredicted RBP13.96□□□□□ -0.17
SCN1B-205ENST00000602150 NSD2O96028 1365 aa13.96□□□□□ -0.17
SCN1B-205ENST00000602150 PANK1Q8TE04 598 aa13.96□□□□□ -0.18
SCN1B-205ENST00000602150 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.18
SCN1B-205ENST00000602150 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
SCN1B-205ENST00000602150 MED14O60244 1454 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 PLEKHG3A1L390 1219 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 ATF3P18847 181 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 MCM10Q7L590 875 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 USP19O94966 1318 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 USP6P35125 1406 aa13.95□□□□□ -0.18
SCN1B-205ENST00000602150 ADAMTSL3P82987 1691 aa13.94□□□□□ -0.18
SCN1B-205ENST00000602150 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
SCN1B-205ENST00000602150 DIP2AQ14689 1571 aa13.94□□□□□ -0.18
SCN1B-205ENST00000602150 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
SCN1B-205ENST00000602150 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
SCN1B-205ENST00000602150 E9PSI1 815 aa13.93□□□□□ -0.18
SCN1B-205ENST00000602150 IL13P35225 146 aa13.93□□□□□ -0.18
SCN1B-205ENST00000602150 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
SCN1B-205ENST00000602150 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
SCN1B-205ENST00000602150 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
SCN1B-205ENST00000602150 COG6Q9Y2V7 657 aa13.92□□□□□ -0.18
SCN1B-205ENST00000602150 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
SCN1B-205ENST00000602150 PKNOX2Q96KN3 472 aa13.92□□□□□ -0.18
SCN1B-205ENST00000602150 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
SCN1B-205ENST00000602150 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
SCN1B-205ENST00000602150 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
SCN1B-205ENST00000602150 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
SCN1B-205ENST00000602150 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
SCN1B-205ENST00000602150 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
SCN1B-205ENST00000602150 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
SCN1B-205ENST00000602150 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
SCN1B-205ENST00000602150 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
SCN1B-205ENST00000602150 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
SCN1B-205ENST00000602150 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
SCN1B-205ENST00000602150 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
SCN1B-205ENST00000602150 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
SCN1B-205ENST00000602150 L1TD1Q5T7N2 865 aaKnown RBP13.88□□□□□ -0.19
SCN1B-205ENST00000602150 EYA1Q99502 592 aa13.88□□□□□ -0.19
SCN1B-205ENST00000602150 FCHSD2O94868 740 aa13.87□□□□□ -0.19
SCN1B-205ENST00000602150 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
SCN1B-205ENST00000602150 C19orf44Q9H6X5 657 aa13.87□□□□□ -0.19
SCN1B-205ENST00000602150 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 NFE2L2Q16236 605 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 RLBP1P12271 317 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 HOXC9P31274 260 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 RGS3P49796 1198 aa13.85□□□□□ -0.19
SCN1B-205ENST00000602150 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
SCN1B-205ENST00000602150 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 GLIPR1L2Q4G1C9 344 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
SCN1B-205ENST00000602150 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 SEC24BO95487 1268 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 CLCN1P35523 988 aa13.84□□□□□ -0.19
SCN1B-205ENST00000602150 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.19
SCN1B-205ENST00000602150 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
SCN1B-205ENST00000602150 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCN1B-205ENST00000602150 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
SCN1B-205ENST00000602150 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.2
SCN1B-205ENST00000602150 GCP02774 474 aa13.83□□□□□ -0.2
SCN1B-205ENST00000602150 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
SCN1B-205ENST00000602150 NALCNQ8IZF0 1738 aa13.82□□□□□ -0.2
SCN1B-205ENST00000602150 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
SCN1B-205ENST00000602150 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
SCN1B-205ENST00000602150 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
SCN1B-205ENST00000602150 OVOS2A0A0J9YW53 1432 aa13.82□□□□□ -0.2
SCN1B-205ENST00000602150 OVOS2Q6IE36 1432 aa13.82□□□□□ -0.2
SCN1B-205ENST00000602150 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 NLRP2Q9NX02 1062 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 PNPLA6Q8IY17 1366 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 IGHDP01880 384 aa13.81□□□□□ -0.2
SCN1B-205ENST00000602150 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
SCN1B-205ENST00000602150 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
SCN1B-205ENST00000602150 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
SCN1B-205ENST00000602150 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
SCN1B-205ENST00000602150 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
SCN1B-205ENST00000602150 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
SCN1B-205ENST00000602150 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
SCN1B-205ENST00000602150 BECN1Q14457 450 aa13.8□□□□□ -0.2
SCN1B-205ENST00000602150 FLT4P35916 1363 aa13.79□□□□□ -0.2
SCN1B-205ENST00000602150 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
SCN1B-205ENST00000602150 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
SCN1B-205ENST00000602150 PIP4K2BP78356 416 aa13.79□□□□□ -0.2
SCN1B-205ENST00000602150 IQSEC2Q5JU85 1478 aa13.79□□□□□ -0.2
SCN1B-205ENST00000602150 A0A0G2JS52 829 aa13.78□□□□□ -0.2
SCN1B-205ENST00000602150 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
SCN1B-205ENST00000602150 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
SCN1B-205ENST00000602150 SLKQ9H2G2 1235 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms