RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-227	ENST00000602056	NFAT5	O94916	1531 aa		33.07	■■■□□ 2.88
GTPBP3-227	ENST00000602056	TONSL	Q96HA7	1378 aa		33.06	■■■□□ 2.88
GTPBP3-227	ENST00000602056	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
GTPBP3-227	ENST00000602056	DDB1	Q16531	1140 aa		33.04	■■■□□ 2.88
GTPBP3-227	ENST00000602056	SLC12A5	Q9H2X9	1139 aa		33.04	■■■□□ 2.88
GTPBP3-227	ENST00000602056	OVOS2	A0A0G2JMS6	1433 aa		33.03	■■■□□ 2.88
GTPBP3-227	ENST00000602056	OVOS2	A0A0J9YW53	1432 aa		33.03	■■■□□ 2.88
GTPBP3-227	ENST00000602056	OVOS2	Q6IE36	1432 aa		33.03	■■■□□ 2.88
GTPBP3-227	ENST00000602056	USP31	Q70CQ4	1352 aa		33.03	■■■□□ 2.88
GTPBP3-227	ENST00000602056	NME9	Q86XW9	330 aa		33.02	■■■□□ 2.88
GTPBP3-227	ENST00000602056	CARD10	Q9BWT7	1032 aa		33.02	■■■□□ 2.88
GTPBP3-227	ENST00000602056	TMC1	Q8TDI8	760 aa		33.01	■■■□□ 2.87
GTPBP3-227	ENST00000602056	PEAK1	Q9H792	1746 aa		33.01	■■■□□ 2.87
GTPBP3-227	ENST00000602056	LRRC37A3	O60309	1634 aa		33.01	■■■□□ 2.87
GTPBP3-227	ENST00000602056	C11orf95	C9JLR9	678 aa	Predicted RBP	33	■■■□□ 2.87
GTPBP3-227	ENST00000602056	CSB-PGBD3	P0DP91	1061 aa		33	■■■□□ 2.87
GTPBP3-227	ENST00000602056	PTF1A	Q7RTS3	328 aa		33	■■■□□ 2.87
GTPBP3-227	ENST00000602056	MARCH10	Q8NA82	808 aa	Predicted RBP	33	■■■□□ 2.87
GTPBP3-227	ENST00000602056	MON2	Q7Z3U7	1717 aa		32.98	■■■□□ 2.87
GTPBP3-227	ENST00000602056	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.97	■■■□□ 2.87
GTPBP3-227	ENST00000602056	RREB1	Q92766	1687 aa		32.97	■■■□□ 2.87
GTPBP3-227	ENST00000602056	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.94	■■■□□ 2.86
GTPBP3-227	ENST00000602056	PUS7	Q96PZ0	661 aa	Known RBP	32.94	■■■□□ 2.86
GTPBP3-227	ENST00000602056	TESK2	Q96S53	571 aa		32.94	■■■□□ 2.86
GTPBP3-227	ENST00000602056	NUP188	Q5SRE5	1749 aa		32.93	■■■□□ 2.86
GTPBP3-227	ENST00000602056	NBPF14	Q5TI25	921 aa		32.92	■■■□□ 2.86
GTPBP3-227	ENST00000602056	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.92	■■■□□ 2.86
GTPBP3-227	ENST00000602056		A0A1W2PP64	1363 aa		32.92	■■■□□ 2.86
GTPBP3-227	ENST00000602056	BCL9	O00512	1426 aa		32.92	■■■□□ 2.86
GTPBP3-227	ENST00000602056	PLSCR1	O15162	318 aa		32.91	■■■□□ 2.86
GTPBP3-227	ENST00000602056	EDC4	Q6P2E9	1401 aa	Known RBP	32.91	■■■□□ 2.86
GTPBP3-227	ENST00000602056	ABCC6	O95255	1503 aa		32.91	■■■□□ 2.86
GTPBP3-227	ENST00000602056	RGPD5	Q99666	1765 aa		32.91	■■■□□ 2.86
GTPBP3-227	ENST00000602056	CCDC7	Q96M83	1385 aa		32.9	■■■□□ 2.86
GTPBP3-227	ENST00000602056	ST20-MTHFS	A0A0A6YYL1	179 aa		32.89	■■■□□ 2.86
GTPBP3-227	ENST00000602056	TERF2IP	Q9NYB0	399 aa		32.89	■■■□□ 2.86
GTPBP3-227	ENST00000602056	ERBB3	P21860	1342 aa		32.88	■■■□□ 2.85
GTPBP3-227	ENST00000602056	USP54	Q70EL1	1684 aa		32.88	■■■□□ 2.85
GTPBP3-227	ENST00000602056	WNK3	Q9BYP7	1800 aa		32.87	■■■□□ 2.85
GTPBP3-227	ENST00000602056	EXOC5	O00471	708 aa		32.87	■■■□□ 2.85
GTPBP3-227	ENST00000602056	PROM2	Q8N271	834 aa		32.86	■■■□□ 2.85
GTPBP3-227	ENST00000602056	NLRP2	Q9NX02	1062 aa		32.84	■■■□□ 2.85
GTPBP3-227	ENST00000602056	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.83	■■■□□ 2.85
GTPBP3-227	ENST00000602056	SBF2	Q86WG5	1849 aa		32.82	■■■□□ 2.84
GTPBP3-227	ENST00000602056	TRIM26	Q12899	539 aa	Predicted RBP	32.82	■■■□□ 2.84
GTPBP3-227	ENST00000602056	TNS2	Q63HR2	1409 aa		32.81	■■■□□ 2.84
GTPBP3-227	ENST00000602056	ANKRD24	Q8TF21	1146 aa		32.81	■■■□□ 2.84
GTPBP3-227	ENST00000602056	KCNQ2	O43526	872 aa		32.78	■■■□□ 2.84
GTPBP3-227	ENST00000602056	NINL	Q9Y2I6	1382 aa		32.77	■■■□□ 2.84
GTPBP3-227	ENST00000602056	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.76	■■■□□ 2.84
GTPBP3-227	ENST00000602056	RGPD4	Q7Z3J3	1758 aa		32.76	■■■□□ 2.84
GTPBP3-227	ENST00000602056	IL2RB	P14784	551 aa		32.75	■■■□□ 2.83
GTPBP3-227	ENST00000602056	IP6K1	Q92551	441 aa		32.75	■■■□□ 2.83
GTPBP3-227	ENST00000602056	SPON1	Q9HCB6	807 aa		32.73	■■■□□ 2.83
GTPBP3-227	ENST00000602056	FBLN1	P23142	703 aa		32.72	■■■□□ 2.83
GTPBP3-227	ENST00000602056	TXNRD1	Q16881	649 aa		32.72	■■■□□ 2.83
GTPBP3-227	ENST00000602056	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.72	■■■□□ 2.83
GTPBP3-227	ENST00000602056	LTN1	O94822	1766 aa		32.71	■■■□□ 2.83
GTPBP3-227	ENST00000602056	ACSBG1	Q96GR2	724 aa		32.71	■■■□□ 2.83
GTPBP3-227	ENST00000602056	SLC24A1	O60721	1099 aa		32.7	■■■□□ 2.83
GTPBP3-227	ENST00000602056	COG3	Q96JB2	828 aa		32.69	■■■□□ 2.82
GTPBP3-227	ENST00000602056	MAP3K19	Q56UN5	1328 aa		32.69	■■■□□ 2.82
GTPBP3-227	ENST00000602056	LTV1	Q96GA3	475 aa	Predicted RBP	32.68	■■■□□ 2.82
GTPBP3-227	ENST00000602056	ANKRD36B	Q8N2N9	1353 aa		32.68	■■■□□ 2.82
GTPBP3-227	ENST00000602056	USP47	Q96K76	1375 aa		32.68	■■■□□ 2.82
GTPBP3-227	ENST00000602056	HOXC9	P31274	260 aa		32.64	■■■□□ 2.82
GTPBP3-227	ENST00000602056	TMF1	P82094	1093 aa		32.63	■■■□□ 2.81
GTPBP3-227	ENST00000602056	FYB1	O15117	783 aa		32.61	■■■□□ 2.81
GTPBP3-227	ENST00000602056	STK32B	Q9NY57	414 aa		32.61	■■■□□ 2.81
GTPBP3-227	ENST00000602056	NHS	Q6T4R5	1651 aa		32.6	■■■□□ 2.81
GTPBP3-227	ENST00000602056	SLC15A2	Q16348	729 aa		32.6	■■■□□ 2.81
GTPBP3-227	ENST00000602056	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.6	■■■□□ 2.81
GTPBP3-227	ENST00000602056	CASZ1	Q86V15	1759 aa		32.6	■■■□□ 2.81
GTPBP3-227	ENST00000602056	ZBTB7A	O95365	584 aa		32.59	■■■□□ 2.81
GTPBP3-227	ENST00000602056	AMPH	P49418	695 aa		32.59	■■■□□ 2.81
GTPBP3-227	ENST00000602056	GGNBP2	Q9H3C7	697 aa		32.59	■■■□□ 2.81
GTPBP3-227	ENST00000602056	RRS1	Q15050	365 aa	Known RBP	32.57	■■■□□ 2.8
GTPBP3-227	ENST00000602056	DDX54	Q8TDD1	881 aa	Known RBP	32.57	■■■□□ 2.8
GTPBP3-227	ENST00000602056	PTGER2	P43116	358 aa		32.55	■■■□□ 2.8
GTPBP3-227	ENST00000602056	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.53	■■■□□ 2.8
GTPBP3-227	ENST00000602056	LRRC4B	Q9NT99	713 aa		32.52	■■■□□ 2.8
GTPBP3-227	ENST00000602056	RTL1	A6NKG5	1358 aa		32.51	■■■□□ 2.79
GTPBP3-227	ENST00000602056	NBPF6	Q5VWK0	638 aa		32.5	■■■□□ 2.79
GTPBP3-227	ENST00000602056	NBPF4	Q96M43	638 aa		32.5	■■■□□ 2.79
GTPBP3-227	ENST00000602056	CARD14	Q9BXL6	1004 aa		32.49	■■■□□ 2.79
GTPBP3-227	ENST00000602056	MEGF6	O75095	1541 aa		32.49	■■■□□ 2.79
GTPBP3-227	ENST00000602056	FAM208A	Q9UK61	1670 aa	Known RBP	32.49	■■■□□ 2.79
GTPBP3-227	ENST00000602056	ZNF827	Q17R98	1081 aa		32.48	■■■□□ 2.79
GTPBP3-227	ENST00000602056	CDCA8	Q53HL2	280 aa		32.47	■■■□□ 2.79
GTPBP3-227	ENST00000602056	PAPPA	Q13219	1627 aa		32.47	■■■□□ 2.79
GTPBP3-227	ENST00000602056	ZCRB1	Q8TBF4	217 aa	Known RBP	32.46	■■■□□ 2.79
GTPBP3-227	ENST00000602056	BTAF1	O14981	1849 aa		32.46	■■■□□ 2.79
GTPBP3-227	ENST00000602056	PRIM1	P49642	420 aa	Known RBP	32.45	■■■□□ 2.79
GTPBP3-227	ENST00000602056	USHBP1	Q8N6Y0	703 aa		32.45	■■■□□ 2.79
GTPBP3-227	ENST00000602056	SGIP1	Q9BQI5	828 aa		32.45	■■■□□ 2.79
GTPBP3-227	ENST00000602056	HSP90AB2P	Q58FF8	381 aa		32.44	■■■□□ 2.78
GTPBP3-227	ENST00000602056	MTFR1L	Q9H019	292 aa		32.44	■■■□□ 2.78
GTPBP3-227	ENST00000602056	TIMELESS	Q9UNS1	1208 aa		32.44	■■■□□ 2.78
GTPBP3-227	ENST00000602056	NSD2	O96028	1365 aa		32.43	■■■□□ 2.78
GTPBP3-227	ENST00000602056	AKT1S1	Q96B36	256 aa		32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms