RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 CSB-PGBD3P0DP91 1061 aa29.51■■■□□ 2.31
SNRPA-211ENST00000601545 EDC4Q6P2E9 1401 aaKnown RBP29.5■■■□□ 2.31
SNRPA-211ENST00000601545 CRB1P82279 1406 aa29.49■■■□□ 2.31
SNRPA-211ENST00000601545 THSD7AQ9UPZ6 1657 aa29.48■■■□□ 2.31
SNRPA-211ENST00000601545 FAM196AQ6ZSG2 479 aa29.48■■■□□ 2.31
SNRPA-211ENST00000601545 MON2Q7Z3U7 1717 aa29.48■■■□□ 2.31
SNRPA-211ENST00000601545 NINLQ9Y2I6 1382 aa29.47■■■□□ 2.31
SNRPA-211ENST00000601545 WDR17Q8IZU2 1322 aa29.46■■■□□ 2.31
SNRPA-211ENST00000601545 BAG6P46379 1132 aa29.46■■■□□ 2.31
SNRPA-211ENST00000601545 CDCA8Q53HL2 280 aa29.46■■■□□ 2.31
SNRPA-211ENST00000601545 TRIM37O94972 964 aa29.44■■■□□ 2.3
SNRPA-211ENST00000601545 NFAT5O94916 1531 aa29.42■■■□□ 2.3
SNRPA-211ENST00000601545 EN1Q05925 392 aaPredicted RBP29.42■■■□□ 2.3
SNRPA-211ENST00000601545 COL18A1P39060 1754 aa29.41■■■□□ 2.3
SNRPA-211ENST00000601545 COG3Q96JB2 828 aa29.41■■■□□ 2.3
SNRPA-211ENST00000601545 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
SNRPA-211ENST00000601545 ANKRD36BQ8N2N9 1353 aa29.39■■■□□ 2.3
SNRPA-211ENST00000601545 DDB1Q16531 1140 aa29.39■■■□□ 2.3
SNRPA-211ENST00000601545 FBLN1P23142 703 aa29.36■■■□□ 2.29
SNRPA-211ENST00000601545 NLRP2Q9NX02 1062 aa29.36■■■□□ 2.29
SNRPA-211ENST00000601545 APBA3O96018 575 aa29.35■■■□□ 2.29
SNRPA-211ENST00000601545 POLR3GLQ9BT43 218 aa29.35■■■□□ 2.29
SNRPA-211ENST00000601545 CDCA7Q9BWT1 371 aaPredicted RBP29.34■■■□□ 2.29
SNRPA-211ENST00000601545 GGNBP2Q9H3C7 697 aa29.34■■■□□ 2.29
SNRPA-211ENST00000601545 OVOS2A0A0J9YW53 1432 aa29.34■■■□□ 2.29
SNRPA-211ENST00000601545 OVOS2Q6IE36 1432 aa29.34■■■□□ 2.29
SNRPA-211ENST00000601545 FYB1O15117 783 aa29.33■■■□□ 2.29
SNRPA-211ENST00000601545 ANKRD24Q8TF21 1146 aa29.33■■■□□ 2.29
SNRPA-211ENST00000601545 EIF4G2P78344 907 aaKnown RBP eCLIP29.32■■■□□ 2.28
SNRPA-211ENST00000601545 EZH2Q15910 746 aaKnown RBP29.31■■■□□ 2.28
SNRPA-211ENST00000601545 IP6K1Q92551 441 aa29.31■■■□□ 2.28
SNRPA-211ENST00000601545 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
SNRPA-211ENST00000601545 RGPD5Q99666 1765 aa29.31■■■□□ 2.28
SNRPA-211ENST00000601545 ERBB3P21860 1342 aa29.3■■■□□ 2.28
SNRPA-211ENST00000601545 EXOC5O00471 708 aa29.3■■■□□ 2.28
SNRPA-211ENST00000601545 HSPA5P11021 654 aaKnown RBP29.29■■■□□ 2.28
SNRPA-211ENST00000601545 AMPHP49418 695 aa29.29■■■□□ 2.28
SNRPA-211ENST00000601545 CCDC7Q96M83 1385 aa29.28■■■□□ 2.28
SNRPA-211ENST00000601545 USP54Q70EL1 1684 aa29.28■■■□□ 2.28
SNRPA-211ENST00000601545 MAP3K19Q56UN5 1328 aa29.27■■■□□ 2.28
SNRPA-211ENST00000601545 C11orf95C9JLR9 678 aaPredicted RBP29.27■■■□□ 2.28
SNRPA-211ENST00000601545 MARCH10Q8NA82 808 aaPredicted RBP29.27■■■□□ 2.28
SNRPA-211ENST00000601545 CAMKK2Q96RR4 588 aa29.27■■■□□ 2.28
SNRPA-211ENST00000601545 CARD14Q9BXL6 1004 aa29.27■■■□□ 2.28
SNRPA-211ENST00000601545 RGPD1P0DJD0 1748 aa29.25■■■□□ 2.27
SNRPA-211ENST00000601545 PARP4Q9UKK3 1724 aaKnown RBP29.25■■■□□ 2.27
SNRPA-211ENST00000601545 ABCC6O95255 1503 aa29.25■■■□□ 2.27
SNRPA-211ENST00000601545 PSDA5PKW4 1024 aaPredicted RBP29.24■■■□□ 2.27
SNRPA-211ENST00000601545 RRS1Q15050 365 aaKnown RBP29.24■■■□□ 2.27
SNRPA-211ENST00000601545 HOXC9P31274 260 aa29.23■■■□□ 2.27
SNRPA-211ENST00000601545 OVOS2A0A0G2JMS6 1433 aa29.22■■■□□ 2.27
SNRPA-211ENST00000601545 IL2RBP14784 551 aa29.22■■■□□ 2.27
SNRPA-211ENST00000601545 DISP2A7MBM2 1401 aa29.21■■■□□ 2.27
SNRPA-211ENST00000601545 LTN1O94822 1766 aa29.21■■■□□ 2.27
SNRPA-211ENST00000601545 PTF1AQ7RTS3 328 aa29.18■■■□□ 2.26
SNRPA-211ENST00000601545 NSD3Q9BZ95 1437 aa29.18■■■□□ 2.26
SNRPA-211ENST00000601545 LRRC37A3O60309 1634 aa29.17■■■□□ 2.26
SNRPA-211ENST00000601545 TNS1Q9HBL0 1735 aaKnown RBP29.17■■■□□ 2.26
SNRPA-211ENST00000601545 R3HDM1Q15032 1099 aaKnown RBP29.16■■■□□ 2.26
SNRPA-211ENST00000601545 BCL11BQ9C0K0 894 aaPredicted RBP29.16■■■□□ 2.26
SNRPA-211ENST00000601545 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
SNRPA-211ENST00000601545 SRCAPQ6ZRS2 3230 aa29.11■■■□□ 2.25
SNRPA-211ENST00000601545 HSP90AB2PQ58FF8 381 aa29.1■■■□□ 2.25
SNRPA-211ENST00000601545 ACSBG1Q96GR2 724 aa29.1■■■□□ 2.25
SNRPA-211ENST00000601545 PANK3Q9H999 370 aa29.1■■■□□ 2.25
SNRPA-211ENST00000601545 CGNL1Q0VF96 1302 aa29.1■■■□□ 2.25
SNRPA-211ENST00000601545 PEAK1Q9H792 1746 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 KCNQ2O43526 872 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 NBPF14Q5TI25 921 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 NBPF6Q5VWK0 638 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 DDX54Q8TDD1 881 aaKnown RBP29.09■■■□□ 2.25
SNRPA-211ENST00000601545 NBPF4Q96M43 638 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 TNS2Q63HR2 1409 aa29.09■■■□□ 2.25
SNRPA-211ENST00000601545 WNK3Q9BYP7 1800 aa29.08■■■□□ 2.25
SNRPA-211ENST00000601545 PLSCR1O15162 318 aa29.08■■■□□ 2.25
SNRPA-211ENST00000601545 PPM1GO15355 546 aaPredicted RBP29.08■■■□□ 2.25
SNRPA-211ENST00000601545 MYOM1P52179 1685 aa29.08■■■□□ 2.25
SNRPA-211ENST00000601545 RTL1A6NKG5 1358 aa29.07■■■□□ 2.24
SNRPA-211ENST00000601545 BCL9O00512 1426 aa29.07■■■□□ 2.24
SNRPA-211ENST00000601545 EMILIN1Q9Y6C2 1016 aa29.07■■■□□ 2.24
SNRPA-211ENST00000601545 USHBP1Q8N6Y0 703 aa29.06■■■□□ 2.24
SNRPA-211ENST00000601545 TNNT2P45379 298 aaPredicted RBP29.02■■■□□ 2.24
SNRPA-211ENST00000601545 INSRP06213 1382 aa29.01■■■□□ 2.24
SNRPA-211ENST00000601545 FLT4P35916 1363 aa29.01■■■□□ 2.24
SNRPA-211ENST00000601545 KIF20BQ96Q89 1820 aa29.01■■■□□ 2.24
SNRPA-211ENST00000601545 PROM2Q8N271 834 aa29.01■■■□□ 2.23
SNRPA-211ENST00000601545 ZCRB1Q8TBF4 217 aaKnown RBP29.01■■■□□ 2.23
SNRPA-211ENST00000601545 SMG6Q86US8 1419 aaKnown RBP29.01■■■□□ 2.23
SNRPA-211ENST00000601545 SBF2Q86WG5 1849 aa28.99■■■□□ 2.23
SNRPA-211ENST00000601545 RAPGEF4Q8WZA2 1011 aa28.98■■■□□ 2.23
SNRPA-211ENST00000601545 KIF24Q5T7B8 1368 aa28.98■■■□□ 2.23
SNRPA-211ENST00000601545 TXNRD1Q16881 649 aa28.97■■■□□ 2.23
SNRPA-211ENST00000601545 POLKQ9UBT6 870 aa28.97■■■□□ 2.23
SNRPA-211ENST00000601545 TATP17735 454 aaPredicted RBP28.95■■■□□ 2.22
SNRPA-211ENST00000601545 WASHC2AQ641Q2 1341 aa28.94■■■□□ 2.22
SNRPA-211ENST00000601545 FAM208AQ9UK61 1670 aaKnown RBP28.93■■■□□ 2.22
SNRPA-211ENST00000601545 SYTL4Q96C24 671 aaPredicted RBP28.93■■■□□ 2.22
SNRPA-211ENST00000601545 MEGF6O75095 1541 aa28.93■■■□□ 2.22
SNRPA-211ENST00000601545 RGPD2P0DJD1 1756 aa28.93■■■□□ 2.22
SNRPA-211ENST00000601545 KNSTRNQ9Y448 316 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms