RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SLC24A1O60721 1099 aa31.95■■■□□ 2.71
SSBP4-209ENST00000601357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.95■■■□□ 2.71
SSBP4-209ENST00000601357 TIMELESSQ9UNS1 1208 aa31.95■■■□□ 2.71
SSBP4-209ENST00000601357 SRCAPQ6ZRS2 3230 aa31.95■■■□□ 2.7
SSBP4-209ENST00000601357 NINLQ9Y2I6 1382 aa31.94■■■□□ 2.7
SSBP4-209ENST00000601357 TERF2IPQ9NYB0 399 aa31.94■■■□□ 2.7
SSBP4-209ENST00000601357 NME9Q86XW9 330 aa31.93■■■□□ 2.7
SSBP4-209ENST00000601357 USP47Q96K76 1375 aa31.93■■■□□ 2.7
SSBP4-209ENST00000601357 WDR17Q8IZU2 1322 aa31.92■■■□□ 2.7
SSBP4-209ENST00000601357 WNK3Q9BYP7 1800 aa31.91■■■□□ 2.7
SSBP4-209ENST00000601357 SOX12O15370 315 aa31.91■■■□□ 2.7
SSBP4-209ENST00000601357 FAM196AQ6ZSG2 479 aa31.91■■■□□ 2.7
SSBP4-209ENST00000601357 DISP2A7MBM2 1401 aa31.91■■■□□ 2.7
SSBP4-209ENST00000601357 BAG6P46379 1132 aa31.9■■■□□ 2.7
SSBP4-209ENST00000601357 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
SSBP4-209ENST00000601357 LRRC37A3O60309 1634 aa31.88■■■□□ 2.69
SSBP4-209ENST00000601357 LTN1O94822 1766 aa31.87■■■□□ 2.69
SSBP4-209ENST00000601357 OVOS2A0A0J9YW53 1432 aa31.87■■■□□ 2.69
SSBP4-209ENST00000601357 OVOS2Q6IE36 1432 aa31.87■■■□□ 2.69
SSBP4-209ENST00000601357 PDE3BQ13370 1112 aa31.87■■■□□ 2.69
SSBP4-209ENST00000601357 TOM1L2Q6ZVM7 507 aa31.86■■■□□ 2.69
SSBP4-209ENST00000601357 PEAK1Q9H792 1746 aa31.83■■■□□ 2.69
SSBP4-209ENST00000601357 TRIM37O94972 964 aa31.82■■■□□ 2.68
SSBP4-209ENST00000601357 TMF1P82094 1093 aa31.81■■■□□ 2.68
SSBP4-209ENST00000601357 EN1Q05925 392 aaPredicted RBP31.81■■■□□ 2.68
SSBP4-209ENST00000601357 CARD10Q9BWT7 1032 aa31.81■■■□□ 2.68
SSBP4-209ENST00000601357 ANKRD36BQ8N2N9 1353 aa31.81■■■□□ 2.68
SSBP4-209ENST00000601357 CSB-PGBD3P0DP91 1061 aa31.76■■■□□ 2.67
SSBP4-209ENST00000601357 CDCA7Q9BWT1 371 aaPredicted RBP31.76■■■□□ 2.67
SSBP4-209ENST00000601357 OVOS2A0A0G2JMS6 1433 aa31.75■■■□□ 2.67
SSBP4-209ENST00000601357 DDB1Q16531 1140 aa31.75■■■□□ 2.67
SSBP4-209ENST00000601357 ERBB3P21860 1342 aa31.75■■■□□ 2.67
SSBP4-209ENST00000601357 CCDC7Q96M83 1385 aa31.74■■■□□ 2.67
SSBP4-209ENST00000601357 C11orf95C9JLR9 678 aaPredicted RBP31.74■■■□□ 2.67
SSBP4-209ENST00000601357 CAMKK2Q96RR4 588 aa31.74■■■□□ 2.67
SSBP4-209ENST00000601357 SBF2Q86WG5 1849 aa31.74■■■□□ 2.67
SSBP4-209ENST00000601357 PARD3Q8TEW0 1356 aa31.72■■■□□ 2.67
SSBP4-209ENST00000601357 EZH2Q15910 746 aaKnown RBP31.72■■■□□ 2.67
SSBP4-209ENST00000601357 MYOM1P52179 1685 aa31.72■■■□□ 2.67
SSBP4-209ENST00000601357 RREB1Q92766 1687 aa31.72■■■□□ 2.67
SSBP4-209ENST00000601357 APBA3O96018 575 aa31.71■■■□□ 2.67
SSBP4-209ENST00000601357 CDCA8Q53HL2 280 aa31.7■■■□□ 2.67
SSBP4-209ENST00000601357 BCL9O00512 1426 aa31.69■■■□□ 2.66
SSBP4-209ENST00000601357 COG3Q96JB2 828 aa31.68■■■□□ 2.66
SSBP4-209ENST00000601357 MARCH10Q8NA82 808 aaPredicted RBP31.67■■■□□ 2.66
SSBP4-209ENST00000601357 ANKRD24Q8TF21 1146 aa31.66■■■□□ 2.66
SSBP4-209ENST00000601357 FAM208AQ9UK61 1670 aaKnown RBP31.65■■■□□ 2.66
SSBP4-209ENST00000601357 IP6K1Q92551 441 aa31.65■■■□□ 2.66
SSBP4-209ENST00000601357 NUP188Q5SRE5 1749 aa31.65■■■□□ 2.66
SSBP4-209ENST00000601357 TNS2Q63HR2 1409 aa31.65■■■□□ 2.66
SSBP4-209ENST00000601357 RGPD3A6NKT7 1758 aaPredicted RBP31.64■■■□□ 2.66
SSBP4-209ENST00000601357 RGPD4Q7Z3J3 1758 aa31.64■■■□□ 2.66
SSBP4-209ENST00000601357 KIF20BQ96Q89 1820 aa31.63■■■□□ 2.65
SSBP4-209ENST00000601357 PSDA5PKW4 1024 aaPredicted RBP31.63■■■□□ 2.65
SSBP4-209ENST00000601357 FYB1O15117 783 aa31.63■■■□□ 2.65
SSBP4-209ENST00000601357 CCER1Q8TC90 406 aaPredicted RBP31.63■■■□□ 2.65
SSBP4-209ENST00000601357 NLRP2Q9NX02 1062 aa31.63■■■□□ 2.65
SSBP4-209ENST00000601357 LRP5O75197 1615 aa31.63■■■□□ 2.65
SSBP4-209ENST00000601357 MAP3K19Q56UN5 1328 aa31.62■■■□□ 2.65
SSBP4-209ENST00000601357 EXOC5O00471 708 aa31.61■■■□□ 2.65
SSBP4-209ENST00000601357 FBLN1P23142 703 aa31.58■■■□□ 2.65
SSBP4-209ENST00000601357 R3HDM1Q15032 1099 aaKnown RBP31.57■■■□□ 2.64
SSBP4-209ENST00000601357 CARD14Q9BXL6 1004 aa31.57■■■□□ 2.64
SSBP4-209ENST00000601357 BCL11BQ9C0K0 894 aaPredicted RBP31.57■■■□□ 2.64
SSBP4-209ENST00000601357 GGNBP2Q9H3C7 697 aa31.57■■■□□ 2.64
SSBP4-209ENST00000601357 IL2RBP14784 551 aa31.56■■■□□ 2.64
SSBP4-209ENST00000601357 HOXC9P31274 260 aa31.56■■■□□ 2.64
SSBP4-209ENST00000601357 PTF1AQ7RTS3 328 aa31.55■■■□□ 2.64
SSBP4-209ENST00000601357 RTL1A6NKG5 1358 aa31.55■■■□□ 2.64
SSBP4-209ENST00000601357 PLSCR1O15162 318 aa31.54■■■□□ 2.64
SSBP4-209ENST00000601357 NSD3Q9BZ95 1437 aa31.51■■■□□ 2.64
SSBP4-209ENST00000601357 RGPD2P0DJD1 1756 aa31.51■■■□□ 2.64
SSBP4-209ENST00000601357 AMPHP49418 695 aa31.51■■■□□ 2.63
SSBP4-209ENST00000601357 NHSQ6T4R5 1651 aa31.51■■■□□ 2.63
SSBP4-209ENST00000601357 LTV1Q96GA3 475 aaPredicted RBP31.5■■■□□ 2.63
SSBP4-209ENST00000601357 RRS1Q15050 365 aaKnown RBP31.49■■■□□ 2.63
SSBP4-209ENST00000601357 EIF4G2P78344 907 aaKnown RBP eCLIP31.48■■■□□ 2.636e-7■■□□□ 11.9
SSBP4-209ENST00000601357 HSPA5P11021 654 aaKnown RBP31.45■■■□□ 2.63
SSBP4-209ENST00000601357 NBPF14Q5TI25 921 aa31.44■■■□□ 2.62
SSBP4-209ENST00000601357 KIF24Q5T7B8 1368 aa31.43■■■□□ 2.62
SSBP4-209ENST00000601357 ANKRD26Q9UPS8 1709 aa31.42■■■□□ 2.62
SSBP4-209ENST00000601357 KCNQ2O43526 872 aa31.42■■■□□ 2.62
SSBP4-209ENST00000601357 PROM2Q8N271 834 aa31.42■■■□□ 2.62
SSBP4-209ENST00000601357 INSRP06213 1382 aa31.42■■■□□ 2.62
SSBP4-209ENST00000601357 SHANK3Q9BYB0 1731 aa31.41■■■□□ 2.62
SSBP4-209ENST00000601357 FLT4P35916 1363 aa31.4■■■□□ 2.62
SSBP4-209ENST00000601357 MEGF6O75095 1541 aa31.39■■■□□ 2.61
SSBP4-209ENST00000601357 NBPF6Q5VWK0 638 aa31.38■■■□□ 2.61
SSBP4-209ENST00000601357 NBPF4Q96M43 638 aa31.38■■■□□ 2.61
SSBP4-209ENST00000601357 CGNL1Q0VF96 1302 aa31.38■■■□□ 2.61
SSBP4-209ENST00000601357 SMG6Q86US8 1419 aaKnown RBP31.38■■■□□ 2.61
SSBP4-209ENST00000601357 BTAF1O14981 1849 aa31.38■■■□□ 2.61
SSBP4-209ENST00000601357 HSP90AB2PQ58FF8 381 aa31.37■■■□□ 2.61
SSBP4-209ENST00000601357 ACSBG1Q96GR2 724 aa31.36■■■□□ 2.61
SSBP4-209ENST00000601357 POLR3GLQ9BT43 218 aa31.34■■■□□ 2.61
SSBP4-209ENST00000601357 ANO8Q9HCE9 1232 aaPredicted RBP31.34■■■□□ 2.61
SSBP4-209ENST00000601357 TXNRD1Q16881 649 aa31.33■■■□□ 2.61
SSBP4-209ENST00000601357 EMILIN1Q9Y6C2 1016 aa31.33■■■□□ 2.61
SSBP4-209ENST00000601357 DDX54Q8TDD1 881 aaKnown RBP31.32■■■□□ 2.6
SSBP4-209ENST00000601357 MAP2P11137 1827 aaKnown RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms