RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
VRK3-223ENST00000601341 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
VRK3-223ENST00000601341 FCHSD2O94868 740 aa15.35■□□□□ 0.05
VRK3-223ENST00000601341 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
VRK3-223ENST00000601341 NGEFQ8N5V2 710 aa15.35■□□□□ 0.05
VRK3-223ENST00000601341 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
VRK3-223ENST00000601341 FANCIQ9NVI1 1328 aa15.34■□□□□ 0.05
VRK3-223ENST00000601341 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
VRK3-223ENST00000601341 IP6K1Q92551 441 aa15.34■□□□□ 0.05
VRK3-223ENST00000601341 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
VRK3-223ENST00000601341 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
VRK3-223ENST00000601341 APAF1O14727 1248 aa15.34■□□□□ 0.05
VRK3-223ENST00000601341 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
VRK3-223ENST00000601341 ROBO1Q9Y6N7 1651 aa15.33■□□□□ 0.04
VRK3-223ENST00000601341 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
VRK3-223ENST00000601341 UBAP1LF5GYI3 381 aa15.33■□□□□ 0.04
VRK3-223ENST00000601341 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
VRK3-223ENST00000601341 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
VRK3-223ENST00000601341 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.04
VRK3-223ENST00000601341 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
VRK3-223ENST00000601341 CABLES1Q8TDN4 633 aa15.32■□□□□ 0.04
VRK3-223ENST00000601341 NEFMP07197 916 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 CERKQ8TCT0 537 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 AHDC1Q5TGY3 1603 aaPredicted RBP15.31■□□□□ 0.04
VRK3-223ENST00000601341 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
VRK3-223ENST00000601341 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
VRK3-223ENST00000601341 HMOX1P09601 288 aa15.3■□□□□ 0.04
VRK3-223ENST00000601341 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
VRK3-223ENST00000601341 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
VRK3-223ENST00000601341 HAP1P54257 671 aaPredicted RBP15.29■□□□□ 0.04
VRK3-223ENST00000601341 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
VRK3-223ENST00000601341 ANP32EQ9BTT0 268 aa15.29■□□□□ 0.04
VRK3-223ENST00000601341 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
VRK3-223ENST00000601341 CPDO75976 1380 aa15.28■□□□□ 0.04
VRK3-223ENST00000601341 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
VRK3-223ENST00000601341 EYA1Q99502 592 aa15.28■□□□□ 0.04
VRK3-223ENST00000601341 LTN1O94822 1766 aa15.27■□□□□ 0.04
VRK3-223ENST00000601341 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.03
VRK3-223ENST00000601341 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
VRK3-223ENST00000601341 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
VRK3-223ENST00000601341 AEBP1Q8IUX7 1158 aa15.26■□□□□ 0.03
VRK3-223ENST00000601341 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
VRK3-223ENST00000601341 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
VRK3-223ENST00000601341 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
VRK3-223ENST00000601341 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
VRK3-223ENST00000601341 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
VRK3-223ENST00000601341 KDRP35968 1356 aa15.25■□□□□ 0.03
VRK3-223ENST00000601341 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 ABCC6O95255 1503 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
VRK3-223ENST00000601341 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
VRK3-223ENST00000601341 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
VRK3-223ENST00000601341 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
VRK3-223ENST00000601341 CHRNA2Q15822 529 aa15.23■□□□□ 0.03
VRK3-223ENST00000601341 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
VRK3-223ENST00000601341 ERBB3P21860 1342 aa15.23■□□□□ 0.03
VRK3-223ENST00000601341 RIPK4P57078 832 aa15.22■□□□□ 0.03
VRK3-223ENST00000601341 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
VRK3-223ENST00000601341 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
VRK3-223ENST00000601341 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
VRK3-223ENST00000601341 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
VRK3-223ENST00000601341 PHLPP1O60346 1717 aa15.21■□□□□ 0.03
VRK3-223ENST00000601341 WDR63Q8IWG1 891 aa15.21■□□□□ 0.02
VRK3-223ENST00000601341 CDCA7LQ96GN5 454 aa15.21■□□□□ 0.02
VRK3-223ENST00000601341 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.02
VRK3-223ENST00000601341 E9PSI1 815 aa15.19■□□□□ 0.02
VRK3-223ENST00000601341 CSB-PGBD3P0DP91 1061 aa15.19■□□□□ 0.02
VRK3-223ENST00000601341 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
VRK3-223ENST00000601341 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
VRK3-223ENST00000601341 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
VRK3-223ENST00000601341 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
VRK3-223ENST00000601341 COL18A1P39060 1754 aa15.18■□□□□ 0.02
VRK3-223ENST00000601341 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
VRK3-223ENST00000601341 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
VRK3-223ENST00000601341 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
VRK3-223ENST00000601341 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
VRK3-223ENST00000601341 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
VRK3-223ENST00000601341 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
VRK3-223ENST00000601341 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
VRK3-223ENST00000601341 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
VRK3-223ENST00000601341 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
VRK3-223ENST00000601341 DUSP27Q5VZP5 1158 aa15.15■□□□□ 0.02
VRK3-223ENST00000601341 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
VRK3-223ENST00000601341 IL16Q14005 1332 aa15.14■□□□□ 0.01
VRK3-223ENST00000601341 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
VRK3-223ENST00000601341 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
VRK3-223ENST00000601341 JCADQ9P266 1359 aa15.14■□□□□ 0.01
VRK3-223ENST00000601341 EVA1CP58658 441 aa15.13■□□□□ 0.01
VRK3-223ENST00000601341 AMOTQ4VCS5 1084 aa15.13■□□□□ 0.01
VRK3-223ENST00000601341 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
VRK3-223ENST00000601341 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms