RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-211ENST00000601222 LTN1O94822 1766 aa12.74□□□□□ -0.37
SIPA1L3-211ENST00000601222 SOX12O15370 315 aa12.74□□□□□ -0.37
SIPA1L3-211ENST00000601222 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
SIPA1L3-211ENST00000601222 A0A0G2JS52 829 aa12.73□□□□□ -0.37
SIPA1L3-211ENST00000601222 MYT1Q01538 1121 aa12.73□□□□□ -0.37
SIPA1L3-211ENST00000601222 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
SIPA1L3-211ENST00000601222 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
SIPA1L3-211ENST00000601222 CRB1P82279 1406 aa12.72□□□□□ -0.37
SIPA1L3-211ENST00000601222 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
SIPA1L3-211ENST00000601222 USP35Q9P2H5 1018 aa12.72□□□□□ -0.37
SIPA1L3-211ENST00000601222 THRAP3Q9Y2W1 955 aaKnown RBP12.72□□□□□ -0.37
SIPA1L3-211ENST00000601222 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
SIPA1L3-211ENST00000601222 CCDC125Q86Z20 511 aa12.71□□□□□ -0.37
SIPA1L3-211ENST00000601222 COG3Q96JB2 828 aa12.71□□□□□ -0.37
SIPA1L3-211ENST00000601222 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.38
SIPA1L3-211ENST00000601222 FYB1O15117 783 aa12.7□□□□□ -0.38
SIPA1L3-211ENST00000601222 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
SIPA1L3-211ENST00000601222 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
SIPA1L3-211ENST00000601222 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
SIPA1L3-211ENST00000601222 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
SIPA1L3-211ENST00000601222 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
SIPA1L3-211ENST00000601222 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
SIPA1L3-211ENST00000601222 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
SIPA1L3-211ENST00000601222 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
SIPA1L3-211ENST00000601222 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
SIPA1L3-211ENST00000601222 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
SIPA1L3-211ENST00000601222 ERBB3P21860 1342 aa12.66□□□□□ -0.38
SIPA1L3-211ENST00000601222 IP6K1Q92551 441 aa12.66□□□□□ -0.38
SIPA1L3-211ENST00000601222 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
SIPA1L3-211ENST00000601222 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 LRRC37A3O60309 1634 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 FBLN1P23142 703 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 RGPD1P0DJD0 1748 aa12.64□□□□□ -0.39
SIPA1L3-211ENST00000601222 DISP2A7MBM2 1401 aa12.63□□□□□ -0.39
SIPA1L3-211ENST00000601222 HOXC9P31274 260 aa12.63□□□□□ -0.39
SIPA1L3-211ENST00000601222 AMPHP49418 695 aa12.63□□□□□ -0.39
SIPA1L3-211ENST00000601222 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
SIPA1L3-211ENST00000601222 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 DDB1Q16531 1140 aa12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 PANK3Q9H999 370 aa12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
SIPA1L3-211ENST00000601222 TNS1Q9HBL0 1735 aaKnown RBP12.61□□□□□ -0.39
SIPA1L3-211ENST00000601222 KIF7Q2M1P5 1343 aa12.61□□□□□ -0.39
SIPA1L3-211ENST00000601222 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 KAT6BQ8WYB5 2073 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 KIF24Q5T7B8 1368 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
SIPA1L3-211ENST00000601222 EXOC5O00471 708 aa12.59□□□□□ -0.39
SIPA1L3-211ENST00000601222 BAG6P46379 1132 aa12.59□□□□□ -0.39
SIPA1L3-211ENST00000601222 LTV1Q96GA3 475 aaPredicted RBP12.59□□□□□ -0.39
SIPA1L3-211ENST00000601222 OVOS2A0A0G2JMS6 1433 aa12.59□□□□□ -0.39
SIPA1L3-211ENST00000601222 INSRP06213 1382 aa12.58□□□□□ -0.4
SIPA1L3-211ENST00000601222 FLT4P35916 1363 aa12.58□□□□□ -0.4
SIPA1L3-211ENST00000601222 TRIM37O94972 964 aa12.58□□□□□ -0.4
SIPA1L3-211ENST00000601222 IL2RBP14784 551 aa12.58□□□□□ -0.4
SIPA1L3-211ENST00000601222 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
SIPA1L3-211ENST00000601222 NSD2O96028 1365 aa12.57□□□□□ -0.4
SIPA1L3-211ENST00000601222 SRCAPQ6ZRS2 3230 aa12.57□□□□□ -0.4
SIPA1L3-211ENST00000601222 BCL9O00512 1426 aa12.57□□□□□ -0.4
SIPA1L3-211ENST00000601222 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
SIPA1L3-211ENST00000601222 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
SIPA1L3-211ENST00000601222 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
SIPA1L3-211ENST00000601222 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
SIPA1L3-211ENST00000601222 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
SIPA1L3-211ENST00000601222 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
SIPA1L3-211ENST00000601222 POLKQ9UBT6 870 aa12.55□□□□□ -0.4
SIPA1L3-211ENST00000601222 APBA3O96018 575 aa12.54□□□□□ -0.4
SIPA1L3-211ENST00000601222 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SIPA1L3-211ENST00000601222 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SIPA1L3-211ENST00000601222 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
SIPA1L3-211ENST00000601222 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
SIPA1L3-211ENST00000601222 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
SIPA1L3-211ENST00000601222 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
SIPA1L3-211ENST00000601222 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
SIPA1L3-211ENST00000601222 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
SIPA1L3-211ENST00000601222 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
SIPA1L3-211ENST00000601222 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
SIPA1L3-211ENST00000601222 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
SIPA1L3-211ENST00000601222 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 MEGF6O75095 1541 aa12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 RREB1Q92766 1687 aa12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
SIPA1L3-211ENST00000601222 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
SIPA1L3-211ENST00000601222 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms