RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 COL24A1Q17RW2 1714 aa14.8□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 PDE4DIPQ5VU43 2346 aa14.8□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 GRIN3BO60391 1043 aa14.79□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 PLSCR1O15162 318 aa14.78□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 CDK19Q9BWU1 502 aa14.78□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 ACEP12821 1306 aa14.77□□□□□ -0.04
MIA-RAB4B-201ENST00000600729 HTRA3P83110 453 aa14.77□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 STK32BQ9NY57 414 aa14.76□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 COL18A1P39060 1754 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 TRPM1Q7Z4N2 1603 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 NLGN2Q8NFZ4 835 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 STAC3Q96MF2 364 aa14.75□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 USP19O94966 1318 aa14.74□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 RGPD5Q99666 1765 aa14.74□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 PLEKHG3A1L390 1219 aa14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 TNRC18O15417 2968 aaPredicted RBP14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 HSPA1AP0DMV8 641 aaKnown RBP14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 HSPA1BP0DMV9 641 aaKnown RBP14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 PROM2Q8N271 834 aa14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 STRN4Q9NRL3 753 aa14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 PPIP5K1Q6PFW1 1433 aa14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 AKAP12Q02952 1782 aa14.73□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 SLIT3O75094 1523 aa14.72□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 LRRC37A3O60309 1634 aa14.72□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 COL5A2P05997 1499 aaPredicted RBP14.71□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
MIA-RAB4B-201ENST00000600729 CPDO75976 1380 aa14.71□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 TOMM70O94826 608 aa14.7□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 PAPPAQ13219 1627 aa14.69□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 CENPJQ9HC77 1338 aaPredicted RBP14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 OVOS2A0A0G2JMS6 1433 aa14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 USP6P35125 1406 aa14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 BARGINQ6ZT62 677 aa14.67□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 PTF1AQ7RTS3 328 aa14.66□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 GCP02774 474 aa14.65□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 MON2Q7Z3U7 1717 aa14.65□□□□□ -0.06
MIA-RAB4B-201ENST00000600729 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 TXNRD1Q16881 649 aa14.63□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 CABP1Q9NZU7 370 aa14.63□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 CRB1P82279 1406 aa14.63□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 NFAT5O94916 1531 aa14.62□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 SIN3AQ96ST3 1273 aa14.62□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 POLD1P28340 1107 aa14.61□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 EVA1CP58658 441 aa14.61□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 MLLT1Q03111 559 aaPredicted RBP14.61□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 CPSF1Q10570 1443 aaKnown RBP14.6□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 BRD4O60885 1362 aaPredicted RBP14.6□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 LTN1O94822 1766 aa14.59□□□□□ -0.07
MIA-RAB4B-201ENST00000600729 NLRP6P59044 892 aa14.58□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 CD163L1Q9NR16 1453 aa14.57□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 TTC21BQ7Z4L5 1316 aa14.56□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 MARCH10Q8NA82 808 aaPredicted RBP14.54□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 WDR17Q8IZU2 1322 aa14.54□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 ROCK2O75116 1388 aaKnown RBP14.54□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 NHSQ6T4R5 1651 aa14.53□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 ABCC6O95255 1503 aa14.52□□□□□ -0.08
MIA-RAB4B-201ENST00000600729 SOX12O15370 315 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 FSTL1Q12841 308 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 ZNF827Q17R98 1081 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 SLC16A10Q8TF71 515 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 NMRK2Q9NPI5 230 aa14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 CICQ96RK0 1608 aaPredicted RBP14.52□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 RGS19P49795 217 aa14.51□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 DDB1Q16531 1140 aa14.51□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 BCL9O00512 1426 aa14.5□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 ABHD8Q96I13 439 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms