RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 MARCH10Q8NA82 808 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-207ENST00000600244 ACEP12821 1306 aa26.22■■□□□ 1.79
SSBP4-207ENST00000600244 GPR162Q16538 588 aa26.2■■□□□ 1.78
SSBP4-207ENST00000600244 AATKQ6ZMQ8 1374 aa26.2■■□□□ 1.78
SSBP4-207ENST00000600244 PLEKHG3A1L390 1219 aa26.18■■□□□ 1.78
SSBP4-207ENST00000600244 NLRP13Q86W25 1043 aa26.17■■□□□ 1.78
SSBP4-207ENST00000600244 CCDC61Q9Y6R9 512 aa26.16■■□□□ 1.78
SSBP4-207ENST00000600244 SHANK3Q9BYB0 1731 aa26.15■■□□□ 1.78
SSBP4-207ENST00000600244 CDK19Q9BWU1 502 aa26.15■■□□□ 1.78
SSBP4-207ENST00000600244 TOM1L2Q6ZVM7 507 aa26.12■■□□□ 1.77
SSBP4-207ENST00000600244 CDCA7Q9BWT1 371 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-207ENST00000600244 TOPAZ1Q8N9V7 1692 aa26.11■■□□□ 1.77
SSBP4-207ENST00000600244 WDR17Q8IZU2 1322 aa26.07■■□□□ 1.76
SSBP4-207ENST00000600244 AKAP12Q02952 1782 aa26.07■■□□□ 1.76
SSBP4-207ENST00000600244 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
SSBP4-207ENST00000600244 WNK3Q9BYP7 1800 aa26.06■■□□□ 1.76
SSBP4-207ENST00000600244 PAPPAQ13219 1627 aa26.06■■□□□ 1.76
SSBP4-207ENST00000600244 ARHGEF28Q8N1W1 1705 aaKnown RBP26.05■■□□□ 1.76
SSBP4-207ENST00000600244 ZBTB7CA1YPR0 619 aa26.05■■□□□ 1.76
SSBP4-207ENST00000600244 COL18A1P39060 1754 aa26.04■■□□□ 1.76
SSBP4-207ENST00000600244 ZNF827Q17R98 1081 aa26.03■■□□□ 1.76
SSBP4-207ENST00000600244 EXOC5O00471 708 aa26.02■■□□□ 1.76
SSBP4-207ENST00000600244 PELP1Q8IZL8 1130 aaKnown RBP26.02■■□□□ 1.76
SSBP4-207ENST00000600244 KDM2AQ9Y2K7 1162 aa26.02■■□□□ 1.76
SSBP4-207ENST00000600244 GOLGB1Q14789 3259 aaKnown RBP26.02■■□□□ 1.76
SSBP4-207ENST00000600244 BRD4O60885 1362 aaPredicted RBP26.01■■□□□ 1.75
SSBP4-207ENST00000600244 SLIT3O75094 1523 aa26.01■■□□□ 1.75
SSBP4-207ENST00000600244 SLC16A10Q8TF71 515 aa26.01■■□□□ 1.75
SSBP4-207ENST00000600244 CARD10Q9BWT7 1032 aa26.01■■□□□ 1.75
SSBP4-207ENST00000600244 HSPA6P17066 643 aa26■■□□□ 1.75
SSBP4-207ENST00000600244 NLRP6P59044 892 aa25.99■■□□□ 1.75
SSBP4-207ENST00000600244 NLGN2Q8NFZ4 835 aa25.99■■□□□ 1.75
SSBP4-207ENST00000600244 COL24A1Q17RW2 1714 aa25.98■■□□□ 1.75
SSBP4-207ENST00000600244 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
SSBP4-207ENST00000600244 DCAF11Q8TEB1 546 aa25.98■■□□□ 1.75
SSBP4-207ENST00000600244 GRIN3BO60391 1043 aa25.97■■□□□ 1.75
SSBP4-207ENST00000600244 YBX3P16989 372 aaKnown RBP eCLIP25.97■■□□□ 1.753e-6■■□□□ 12.9
SSBP4-207ENST00000600244 STAC3Q96MF2 364 aa25.97■■□□□ 1.75
SSBP4-207ENST00000600244 LRRC4BQ9NT99 713 aa25.97■■□□□ 1.75
SSBP4-207ENST00000600244 NHSQ6T4R5 1651 aa25.96■■□□□ 1.75
SSBP4-207ENST00000600244 POLD1P28340 1107 aa25.96■■□□□ 1.75
SSBP4-207ENST00000600244 AKT1S1Q96B36 256 aa25.95■■□□□ 1.74
SSBP4-207ENST00000600244 ATP10DQ9P241 1426 aa25.95■■□□□ 1.74
SSBP4-207ENST00000600244 ACSBG1Q96GR2 724 aa25.94■■□□□ 1.74
SSBP4-207ENST00000600244 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
SSBP4-207ENST00000600244 PPIP5K1Q6PFW1 1433 aa25.93■■□□□ 1.74
SSBP4-207ENST00000600244 TNS2Q63HR2 1409 aa25.92■■□□□ 1.74
SSBP4-207ENST00000600244 CPSF1Q10570 1443 aaKnown RBP25.91■■□□□ 1.74
SSBP4-207ENST00000600244 USP6P35125 1406 aa25.9■■□□□ 1.74
SSBP4-207ENST00000600244 PNPLA7Q6ZV29 1317 aa25.89■■□□□ 1.74
SSBP4-207ENST00000600244 GPBP1L1Q9HC44 474 aaPredicted RBP25.89■■□□□ 1.74
SSBP4-207ENST00000600244 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
SSBP4-207ENST00000600244 CSB-PGBD3P0DP91 1061 aa25.88■■□□□ 1.73
SSBP4-207ENST00000600244 QSER1Q2KHR3 1735 aa25.88■■□□□ 1.73
SSBP4-207ENST00000600244 RGPD5Q99666 1765 aa25.87■■□□□ 1.73
SSBP4-207ENST00000600244 BTAF1O14981 1849 aa25.86■■□□□ 1.73
SSBP4-207ENST00000600244 TRPM1Q7Z4N2 1603 aa25.86■■□□□ 1.73
SSBP4-207ENST00000600244 SRPK2P78362 688 aaKnown RBP25.85■■□□□ 1.73
SSBP4-207ENST00000600244 ADCY9O60503 1353 aa25.84■■□□□ 1.73
SSBP4-207ENST00000600244 CABP2Q9NPB3 220 aa25.84■■□□□ 1.73
SSBP4-207ENST00000600244 ABCC6O95255 1503 aa25.83■■□□□ 1.73
SSBP4-207ENST00000600244 SLC27A3Q5K4L6 730 aa25.83■■□□□ 1.73
SSBP4-207ENST00000600244 CABP1Q9NZU7 370 aa25.83■■□□□ 1.73
SSBP4-207ENST00000600244 PIK3C2AO00443 1686 aa25.83■■□□□ 1.73
SSBP4-207ENST00000600244 KCNH5Q8NCM2 988 aa25.82■■□□□ 1.72
SSBP4-207ENST00000600244 TFCP2L1Q9NZI6 479 aa25.79■■□□□ 1.72
SSBP4-207ENST00000600244 DNAJC5GQ8N7S2 189 aa25.76■■□□□ 1.71
SSBP4-207ENST00000600244 ZNF526Q8TF50 670 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-207ENST00000600244 TUBGCP6Q96RT7 1819 aa25.75■■□□□ 1.71
SSBP4-207ENST00000600244 KAT6BQ8WYB5 2073 aa25.75■■□□□ 1.71
SSBP4-207ENST00000600244 SOX12O15370 315 aa25.74■■□□□ 1.71
SSBP4-207ENST00000600244 IL2RBP14784 551 aa25.74■■□□□ 1.71
SSBP4-207ENST00000600244 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
SSBP4-207ENST00000600244 KIF3CO14782 793 aa25.73■■□□□ 1.71
SSBP4-207ENST00000600244 KCNQ4P56696 695 aa25.73■■□□□ 1.71
SSBP4-207ENST00000600244 NFAT5O94916 1531 aa25.73■■□□□ 1.71
SSBP4-207ENST00000600244 CENPJQ9HC77 1338 aaPredicted RBP25.71■■□□□ 1.71
SSBP4-207ENST00000600244 APLP1P51693 650 aa25.71■■□□□ 1.71
SSBP4-207ENST00000600244 NBPF1Q3BBV0 1214 aa25.71■■□□□ 1.71
SSBP4-207ENST00000600244 CD2APQ9Y5K6 639 aa25.7■■□□□ 1.7
SSBP4-207ENST00000600244 ERBB3P21860 1342 aa25.69■■□□□ 1.7
SSBP4-207ENST00000600244 QRICH2Q9H0J4 1663 aa25.69■■□□□ 1.7
SSBP4-207ENST00000600244 NLRP2Q9NX02 1062 aa25.69■■□□□ 1.7
SSBP4-207ENST00000600244 COL23A1Q86Y22 540 aaPredicted RBP25.68■■□□□ 1.7
SSBP4-207ENST00000600244 KIAA1210Q9ULL0 1709 aa25.68■■□□□ 1.7
SSBP4-207ENST00000600244 ZNF692Q9BU19 519 aaPredicted RBP25.67■■□□□ 1.7
SSBP4-207ENST00000600244 TTC21AQ8NDW8 1320 aa25.65■■□□□ 1.7
SSBP4-207ENST00000600244 MSH5O43196 834 aa25.62■■□□□ 1.69
SSBP4-207ENST00000600244 COL13A1Q5TAT6 717 aaPredicted RBP25.62■■□□□ 1.69
SSBP4-207ENST00000600244 MSL1Q68DK7 614 aa25.62■■□□□ 1.69
SSBP4-207ENST00000600244 LY75O60449 1722 aa25.61■■□□□ 1.69
SSBP4-207ENST00000600244 PRIM1P49642 420 aaKnown RBP25.61■■□□□ 1.69
SSBP4-207ENST00000600244 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
SSBP4-207ENST00000600244 DDX54Q8TDD1 881 aaKnown RBP25.6■■□□□ 1.69
SSBP4-207ENST00000600244 NSD2O96028 1365 aa25.59■■□□□ 1.69
SSBP4-207ENST00000600244 ANKRD36BQ8N2N9 1353 aa25.58■■□□□ 1.69
SSBP4-207ENST00000600244 ANKRD24Q8TF21 1146 aa25.58■■□□□ 1.69
SSBP4-207ENST00000600244 CCNL1Q9UK58 526 aaPredicted RBP25.58■■□□□ 1.69
SSBP4-207ENST00000600244 TOMM70O94826 608 aa25.56■■□□□ 1.68
SSBP4-207ENST00000600244 SYTL4Q96C24 671 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms