RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
VRK3-218ENST00000600031 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
VRK3-218ENST00000600031 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 HOXC9P31274 260 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 ANP32EQ9BTT0 268 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
VRK3-218ENST00000600031 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 LTN1O94822 1766 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
VRK3-218ENST00000600031 SPATA31A3Q5VYP0 1347 aa19.95■□□□□ 0.78
VRK3-218ENST00000600031 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
VRK3-218ENST00000600031 PRKAR2BP31323 418 aa19.94■□□□□ 0.78
VRK3-218ENST00000600031 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
VRK3-218ENST00000600031 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
VRK3-218ENST00000600031 SOS2Q07890 1332 aaPredicted RBP19.94■□□□□ 0.78
VRK3-218ENST00000600031 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
VRK3-218ENST00000600031 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
VRK3-218ENST00000600031 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
VRK3-218ENST00000600031 RGPD1P0DJD0 1748 aa19.92■□□□□ 0.78
VRK3-218ENST00000600031 ARHGEF25Q86VW2 580 aa19.92■□□□□ 0.78
VRK3-218ENST00000600031 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
VRK3-218ENST00000600031 IP6K1Q92551 441 aa19.92■□□□□ 0.78
VRK3-218ENST00000600031 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
VRK3-218ENST00000600031 TMPOP42166 694 aaKnown RBP19.91■□□□□ 0.78
VRK3-218ENST00000600031 AEBP1Q8IUX7 1158 aa19.91■□□□□ 0.78
VRK3-218ENST00000600031 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
VRK3-218ENST00000600031 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
VRK3-218ENST00000600031 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
VRK3-218ENST00000600031 PHACTR3Q96KR7 559 aa19.91■□□□□ 0.78
VRK3-218ENST00000600031 CABLES1Q8TDN4 633 aa19.9■□□□□ 0.78
VRK3-218ENST00000600031 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
VRK3-218ENST00000600031 NHSL1Q5SYE7 1610 aa19.89■□□□□ 0.78
VRK3-218ENST00000600031 PHRF1Q9P1Y6 1649 aaKnown RBP19.89■□□□□ 0.78
VRK3-218ENST00000600031 CCDC27Q2M243 656 aa19.89■□□□□ 0.77
VRK3-218ENST00000600031 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
VRK3-218ENST00000600031 LTV1Q96GA3 475 aaPredicted RBP19.88■□□□□ 0.77
VRK3-218ENST00000600031 EYA1Q99502 592 aa19.88■□□□□ 0.77
VRK3-218ENST00000600031 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
VRK3-218ENST00000600031 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
VRK3-218ENST00000600031 ZC3H6P61129 1189 aaKnown RBP19.88■□□□□ 0.77
VRK3-218ENST00000600031 SLFN5Q08AF3 891 aa19.87■□□□□ 0.77
VRK3-218ENST00000600031 IGSF1Q8N6C5 1336 aa19.87■□□□□ 0.77
VRK3-218ENST00000600031 NEFMP07197 916 aa19.87■□□□□ 0.77
VRK3-218ENST00000600031 CRYBG1Q9Y4K1 1723 aa19.86■□□□□ 0.77
VRK3-218ENST00000600031 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
VRK3-218ENST00000600031 ROBO1Q9Y6N7 1651 aa19.86■□□□□ 0.77
VRK3-218ENST00000600031 RIPK4P57078 832 aa19.85■□□□□ 0.77
VRK3-218ENST00000600031 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
VRK3-218ENST00000600031 IRX6P78412 446 aaPredicted RBP19.84■□□□□ 0.77
VRK3-218ENST00000600031 TRMT2AQ8IZ69 625 aaKnown RBP19.84■□□□□ 0.77
VRK3-218ENST00000600031 AXIN2Q9Y2T1 843 aa19.84■□□□□ 0.77
VRK3-218ENST00000600031 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
VRK3-218ENST00000600031 KDRP35968 1356 aa19.83■□□□□ 0.77
VRK3-218ENST00000600031 WDR63Q8IWG1 891 aa19.83■□□□□ 0.77
VRK3-218ENST00000600031 E9PSI1 815 aa19.82■□□□□ 0.76
VRK3-218ENST00000600031 RGPD5Q99666 1765 aa19.8■□□□□ 0.76
VRK3-218ENST00000600031 NBPF6Q5VWK0 638 aa19.8■□□□□ 0.76
VRK3-218ENST00000600031 NBPF4Q96M43 638 aa19.8■□□□□ 0.76
VRK3-218ENST00000600031 USHBP1Q8N6Y0 703 aa19.79■□□□□ 0.76
VRK3-218ENST00000600031 ANKRD24Q8TF21 1146 aa19.79■□□□□ 0.76
VRK3-218ENST00000600031 KIAA0232Q92628 1395 aa19.79■□□□□ 0.76
VRK3-218ENST00000600031 LRRC59Q96AG4 307 aaKnown RBP19.79■□□□□ 0.76
VRK3-218ENST00000600031 RGPD2P0DJD1 1756 aa19.79■□□□□ 0.76
VRK3-218ENST00000600031 COL18A1P39060 1754 aa19.79■□□□□ 0.76
VRK3-218ENST00000600031 AHDC1Q5TGY3 1603 aaPredicted RBP19.79■□□□□ 0.76
VRK3-218ENST00000600031 CHRNA2Q15822 529 aa19.78■□□□□ 0.76
VRK3-218ENST00000600031 CPDO75976 1380 aa19.78■□□□□ 0.76
VRK3-218ENST00000600031 DLG5Q8TDM6 1919 aa19.78■□□□□ 0.76
VRK3-218ENST00000600031 TOM1O60784 492 aa19.78■□□□□ 0.76
VRK3-218ENST00000600031 RCAN3Q9UKA8 241 aa19.78■□□□□ 0.76
VRK3-218ENST00000600031 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
VRK3-218ENST00000600031 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
VRK3-218ENST00000600031 PIP4K2BP78356 416 aa19.75■□□□□ 0.75
VRK3-218ENST00000600031 ERBB3P21860 1342 aa19.75■□□□□ 0.75
VRK3-218ENST00000600031 MTHFSDQ2M296 383 aaKnown RBP19.75■□□□□ 0.75
VRK3-218ENST00000600031 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
VRK3-218ENST00000600031 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
VRK3-218ENST00000600031 RNF123Q5XPI4 1314 aa19.74■□□□□ 0.75
VRK3-218ENST00000600031 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
VRK3-218ENST00000600031 IL16Q14005 1332 aa19.73■□□□□ 0.75
VRK3-218ENST00000600031 ABCC6O95255 1503 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 PRDM11Q9NQV5 511 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 DCTN1Q14203 1278 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
VRK3-218ENST00000600031 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
VRK3-218ENST00000600031 PHLPP1O60346 1717 aa19.7■□□□□ 0.74
VRK3-218ENST00000600031 CAMTA1Q9Y6Y1 1673 aa19.7■□□□□ 0.74
VRK3-218ENST00000600031 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
VRK3-218ENST00000600031 COL16A1Q07092 1604 aaPredicted RBP19.69■□□□□ 0.74
VRK3-218ENST00000600031 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
VRK3-218ENST00000600031 MCM10Q7L590 875 aa19.67■□□□□ 0.74
VRK3-218ENST00000600031 NLRP2Q9NX02 1062 aa19.67■□□□□ 0.74
VRK3-218ENST00000600031 COL22A1Q8NFW1 1626 aaPredicted RBP19.67■□□□□ 0.74
VRK3-218ENST00000600031 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
VRK3-218ENST00000600031 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
VRK3-218ENST00000600031 CALD1Q05682 793 aaKnown RBP19.67■□□□□ 0.74
VRK3-218ENST00000600031 CERKQ8TCT0 537 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms