RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 PTGER2P43116 358 aa13.73□□□□□ -0.21
LINC00649-210ENST00000599421 DDB1Q16531 1140 aa13.73□□□□□ -0.21
LINC00649-210ENST00000599421 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
LINC00649-210ENST00000599421 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
LINC00649-210ENST00000599421 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
LINC00649-210ENST00000599421 PTF1AQ7RTS3 328 aa13.72□□□□□ -0.21
LINC00649-210ENST00000599421 PROM2Q8N271 834 aa13.72□□□□□ -0.21
LINC00649-210ENST00000599421 SLIT3O75094 1523 aa13.72□□□□□ -0.21
LINC00649-210ENST00000599421 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
LINC00649-210ENST00000599421 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
LINC00649-210ENST00000599421 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
LINC00649-210ENST00000599421 RGPD5Q99666 1765 aa13.71□□□□□ -0.22
LINC00649-210ENST00000599421 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
LINC00649-210ENST00000599421 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
LINC00649-210ENST00000599421 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
LINC00649-210ENST00000599421 GOLGB1Q14789 3259 aaKnown RBP13.69□□□□□ -0.22
LINC00649-210ENST00000599421 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
LINC00649-210ENST00000599421 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
LINC00649-210ENST00000599421 CDCA7Q9BWT1 371 aaPredicted RBP13.69□□□□□ -0.22
LINC00649-210ENST00000599421 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
LINC00649-210ENST00000599421 WDR17Q8IZU2 1322 aa13.68□□□□□ -0.22
LINC00649-210ENST00000599421 USP6P35125 1406 aa13.68□□□□□ -0.22
LINC00649-210ENST00000599421 NLRP6P59044 892 aa13.68□□□□□ -0.22
LINC00649-210ENST00000599421 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
LINC00649-210ENST00000599421 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
LINC00649-210ENST00000599421 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
LINC00649-210ENST00000599421 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
LINC00649-210ENST00000599421 SLC15A2Q16348 729 aa13.67□□□□□ -0.22
LINC00649-210ENST00000599421 TXNRD1Q16881 649 aa13.67□□□□□ -0.22
LINC00649-210ENST00000599421 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
LINC00649-210ENST00000599421 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
LINC00649-210ENST00000599421 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
LINC00649-210ENST00000599421 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
LINC00649-210ENST00000599421 C1QTNF8P60827 252 aa13.65□□□□□ -0.22
LINC00649-210ENST00000599421 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
LINC00649-210ENST00000599421 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
LINC00649-210ENST00000599421 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
LINC00649-210ENST00000599421 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
LINC00649-210ENST00000599421 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
LINC00649-210ENST00000599421 CEP350Q5VT06 3117 aa13.64□□□□□ -0.23
LINC00649-210ENST00000599421 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
LINC00649-210ENST00000599421 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
LINC00649-210ENST00000599421 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
LINC00649-210ENST00000599421 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
LINC00649-210ENST00000599421 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
LINC00649-210ENST00000599421 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
LINC00649-210ENST00000599421 BTAF1O14981 1849 aa13.62□□□□□ -0.23
LINC00649-210ENST00000599421 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
LINC00649-210ENST00000599421 CCDC7Q96M83 1385 aa13.61□□□□□ -0.23
LINC00649-210ENST00000599421 EXOC5O00471 708 aa13.61□□□□□ -0.23
LINC00649-210ENST00000599421 ARXQ96QS3 562 aa13.61□□□□□ -0.23
LINC00649-210ENST00000599421 ABCC6O95255 1503 aa13.6□□□□□ -0.23
LINC00649-210ENST00000599421 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
LINC00649-210ENST00000599421 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
LINC00649-210ENST00000599421 NFAT5O94916 1531 aa13.59□□□□□ -0.23
LINC00649-210ENST00000599421 QSER1Q2KHR3 1735 aa13.59□□□□□ -0.23
LINC00649-210ENST00000599421 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
LINC00649-210ENST00000599421 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
LINC00649-210ENST00000599421 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
LINC00649-210ENST00000599421 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
LINC00649-210ENST00000599421 LTN1O94822 1766 aa13.57□□□□□ -0.24
LINC00649-210ENST00000599421 SOX12O15370 315 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 GPR162Q16538 588 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
LINC00649-210ENST00000599421 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
LINC00649-210ENST00000599421 GIGYF1O75420 1035 aaPredicted RBP13.55□□□□□ -0.24
LINC00649-210ENST00000599421 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
LINC00649-210ENST00000599421 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
LINC00649-210ENST00000599421 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
LINC00649-210ENST00000599421 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
LINC00649-210ENST00000599421 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
LINC00649-210ENST00000599421 ERBB3P21860 1342 aa13.53□□□□□ -0.24
LINC00649-210ENST00000599421 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
LINC00649-210ENST00000599421 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.25
LINC00649-210ENST00000599421 IL2RBP14784 551 aa13.51□□□□□ -0.25
LINC00649-210ENST00000599421 POLD1P28340 1107 aa13.51□□□□□ -0.25
LINC00649-210ENST00000599421 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
LINC00649-210ENST00000599421 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
LINC00649-210ENST00000599421 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
LINC00649-210ENST00000599421 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
LINC00649-210ENST00000599421 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
LINC00649-210ENST00000599421 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
LINC00649-210ENST00000599421 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
LINC00649-210ENST00000599421 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
LINC00649-210ENST00000599421 LY75O60449 1722 aa13.48□□□□□ -0.25
LINC00649-210ENST00000599421 NEUROD1Q13562 356 aa13.48□□□□□ -0.25
LINC00649-210ENST00000599421 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
LINC00649-210ENST00000599421 NLGN2Q8NFZ4 835 aa13.47□□□□□ -0.25
LINC00649-210ENST00000599421 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
LINC00649-210ENST00000599421 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
LINC00649-210ENST00000599421 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.25
LINC00649-210ENST00000599421 DOT1LQ8TEK3 1739 aa13.46□□□□□ -0.25
LINC00649-210ENST00000599421 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
LINC00649-210ENST00000599421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00649-210ENST00000599421 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
LINC00649-210ENST00000599421 SBNO2Q9Y2G9 1366 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms