RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 BCAMP50895 628 aa15.45■□□□□ 0.06
SMG9-207ENST00000598860 RNF166Q96A37 237 aaPredicted RBP15.45■□□□□ 0.06
SMG9-207ENST00000598860 SOWAHBA6NEL2 793 aa15.44■□□□□ 0.06
SMG9-207ENST00000598860 MMRN1Q13201 1228 aa15.44■□□□□ 0.06
SMG9-207ENST00000598860 C3P01024 1663 aa15.44■□□□□ 0.06
SMG9-207ENST00000598860 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
SMG9-207ENST00000598860 CLCN1P35523 988 aa15.43■□□□□ 0.06
SMG9-207ENST00000598860 THSD4Q6ZMP0 1018 aa15.43■□□□□ 0.06
SMG9-207ENST00000598860 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
SMG9-207ENST00000598860 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
SMG9-207ENST00000598860 REPIN1Q9BWE0 567 aaKnown RBP15.42■□□□□ 0.06
SMG9-207ENST00000598860 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
SMG9-207ENST00000598860 EIF2AK4Q9P2K8 1649 aaKnown RBP15.42■□□□□ 0.06
SMG9-207ENST00000598860 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
SMG9-207ENST00000598860 SLF2Q8IX21 1173 aa15.41■□□□□ 0.06
SMG9-207ENST00000598860 UHRF1BP1Q6BDS2 1440 aa15.41■□□□□ 0.06
SMG9-207ENST00000598860 MROH2AA6NES4 1674 aa15.41■□□□□ 0.06
SMG9-207ENST00000598860 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
SMG9-207ENST00000598860 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
SMG9-207ENST00000598860 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
SMG9-207ENST00000598860 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
SMG9-207ENST00000598860 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
SMG9-207ENST00000598860 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
SMG9-207ENST00000598860 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
SMG9-207ENST00000598860 TMUB1Q9BVT8 246 aa15.39■□□□□ 0.05
SMG9-207ENST00000598860 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
SMG9-207ENST00000598860 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
SMG9-207ENST00000598860 NAIPQ13075 1403 aa15.38■□□□□ 0.05
SMG9-207ENST00000598860 NPATQ14207 1427 aa15.38■□□□□ 0.05
SMG9-207ENST00000598860 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
SMG9-207ENST00000598860 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
SMG9-207ENST00000598860 ERBINQ96RT1 1412 aa15.37■□□□□ 0.05
SMG9-207ENST00000598860 MS4A1P11836 297 aa15.37■□□□□ 0.05
SMG9-207ENST00000598860 PTPN5P54829 565 aa15.37■□□□□ 0.05
SMG9-207ENST00000598860 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
SMG9-207ENST00000598860 TSR3Q9UJK0 312 aaKnown RBP15.36■□□□□ 0.05
SMG9-207ENST00000598860 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
SMG9-207ENST00000598860 PPP4CP60510 307 aa15.35■□□□□ 0.05
SMG9-207ENST00000598860 SULF1Q8IWU6 871 aa15.34■□□□□ 0.05
SMG9-207ENST00000598860 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
SMG9-207ENST00000598860 FAM135AQ9P2D6 1515 aa15.33■□□□□ 0.05
SMG9-207ENST00000598860 DEPDC5O75140 1603 aa15.33■□□□□ 0.04
SMG9-207ENST00000598860 SLC10A3P09131 477 aa15.33■□□□□ 0.04
SMG9-207ENST00000598860 RDH13Q8NBN7 331 aa15.33■□□□□ 0.04
SMG9-207ENST00000598860 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
SMG9-207ENST00000598860 UNC13BO14795 1591 aa15.32■□□□□ 0.04
SMG9-207ENST00000598860 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
SMG9-207ENST00000598860 HRCP23327 699 aa15.32■□□□□ 0.04
SMG9-207ENST00000598860 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
SMG9-207ENST00000598860 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
SMG9-207ENST00000598860 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
SMG9-207ENST00000598860 RAB3GAP2Q9H2M9 1393 aa15.3■□□□□ 0.04
SMG9-207ENST00000598860 GOPCQ9HD26 462 aa15.3■□□□□ 0.04
SMG9-207ENST00000598860 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
SMG9-207ENST00000598860 PZPP20742 1482 aa15.28■□□□□ 0.04
SMG9-207ENST00000598860 TNRQ92752 1358 aa15.28■□□□□ 0.04
SMG9-207ENST00000598860 CD46P15529 392 aa15.28■□□□□ 0.04
SMG9-207ENST00000598860 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.03
SMG9-207ENST00000598860 ABCC3O15438 1527 aa15.27■□□□□ 0.03
SMG9-207ENST00000598860 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.03
SMG9-207ENST00000598860 KANK1Q14678 1352 aa15.26■□□□□ 0.03
SMG9-207ENST00000598860 IQGAP3Q86VI3 1631 aa15.26■□□□□ 0.03
SMG9-207ENST00000598860 HCSTQ9UBK5 93 aa15.26■□□□□ 0.03
SMG9-207ENST00000598860 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
SMG9-207ENST00000598860 CFHP08603 1231 aa15.25■□□□□ 0.03
SMG9-207ENST00000598860 MROH1Q8NDA8 1641 aa15.25■□□□□ 0.03
SMG9-207ENST00000598860 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
SMG9-207ENST00000598860 CFAP65Q6ZU64 1925 aaKnown RBP15.23■□□□□ 0.03
SMG9-207ENST00000598860 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
SMG9-207ENST00000598860 CAMSAP1Q5T5Y3 1602 aa15.23■□□□□ 0.03
SMG9-207ENST00000598860 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
SMG9-207ENST00000598860 CEP152O94986 1710 aa15.23■□□□□ 0.03
SMG9-207ENST00000598860 APLP1P51693 650 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 KMT5BQ4FZB7 885 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 THEMISQ8N1K5 641 aaPredicted RBP15.22■□□□□ 0.03
SMG9-207ENST00000598860 ARXQ96QS3 562 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 PTPRTO14522 1441 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 TET3O43151 1660 aa15.22■□□□□ 0.03
SMG9-207ENST00000598860 GCGRP47871 477 aa15.21■□□□□ 0.03
SMG9-207ENST00000598860 ZNF142P52746 1687 aaPredicted RBP15.21■□□□□ 0.03
SMG9-207ENST00000598860 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
SMG9-207ENST00000598860 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
SMG9-207ENST00000598860 PCMTD1Q96MG8 357 aaPredicted RBP15.2■□□□□ 0.02
SMG9-207ENST00000598860 BEGAINQ9BUH8 593 aa15.2■□□□□ 0.02
SMG9-207ENST00000598860 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
SMG9-207ENST00000598860 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
SMG9-207ENST00000598860 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
SMG9-207ENST00000598860 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
SMG9-207ENST00000598860 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
SMG9-207ENST00000598860 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
SMG9-207ENST00000598860 ERVK-7P63135 1459 aa15.18■□□□□ 0.02
SMG9-207ENST00000598860 SPATA31D1Q6ZQQ2 1576 aa15.17■□□□□ 0.02
SMG9-207ENST00000598860 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
SMG9-207ENST00000598860 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
SMG9-207ENST00000598860 NUP155O75694 1391 aa15.16■□□□□ 0.02
SMG9-207ENST00000598860 ACTN4O43707 911 aaKnown RBP15.16■□□□□ 0.02
SMG9-207ENST00000598860 FBXO41Q8TF61 875 aa15.16■□□□□ 0.02
SMG9-207ENST00000598860 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
SMG9-207ENST00000598860 EFCAB6Q5THR3 1501 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms