RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 DDB1Q16531 1140 aa6.88□□□□□ -1.31
HERC3-213ENST00000598772 RBM46Q8TBY0 533 aaKnown RBP6.88□□□□□ -1.31
HERC3-213ENST00000598772 ADCY9O60503 1353 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 DHX57Q6P158 1386 aaKnown RBP6.87□□□□□ -1.31
HERC3-213ENST00000598772 VGFO15240 615 aaPredicted RBP6.87□□□□□ -1.31
HERC3-213ENST00000598772 SAFB2Q14151 953 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERC3-213ENST00000598772 ZNF827Q17R98 1081 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 SLC16A10Q8TF71 515 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 ABHD8Q96I13 439 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 TFCP2L1Q9NZI6 479 aa6.87□□□□□ -1.31
HERC3-213ENST00000598772 OVOS2A0A0G2JMS6 1433 aa6.86□□□□□ -1.31
HERC3-213ENST00000598772 OVOS2A0A0J9YW53 1432 aa6.86□□□□□ -1.31
HERC3-213ENST00000598772 OVOS2Q6IE36 1432 aa6.86□□□□□ -1.31
HERC3-213ENST00000598772 FSTL1Q12841 308 aa6.86□□□□□ -1.31
HERC3-213ENST00000598772 ACSBG1Q96GR2 724 aa6.86□□□□□ -1.31
HERC3-213ENST00000598772 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
HERC3-213ENST00000598772 FOXN1O15353 648 aa6.85□□□□□ -1.31
HERC3-213ENST00000598772 MARCH10Q8NA82 808 aaPredicted RBP6.85□□□□□ -1.31
HERC3-213ENST00000598772 AIDAQ96BJ3 306 aa6.85□□□□□ -1.31
HERC3-213ENST00000598772 GPRASP1Q5JY77 1395 aa6.84□□□□□ -1.31
HERC3-213ENST00000598772 TMEM132EQ6IEE7 984 aa6.84□□□□□ -1.31
HERC3-213ENST00000598772 NGDNQ8NEJ9 315 aaKnown RBP6.84□□□□□ -1.31
HERC3-213ENST00000598772 RRAGCQ9HB90 399 aa6.84□□□□□ -1.31
HERC3-213ENST00000598772 THRAP3Q9Y2W1 955 aaKnown RBP6.84□□□□□ -1.31
HERC3-213ENST00000598772 SSH2Q76I76 1423 aa6.84□□□□□ -1.32
HERC3-213ENST00000598772 PLEKHH1Q9ULM0 1364 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 CDC42BPGQ6DT37 1551 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 KCNQ4P56696 695 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 MKRN1Q9UHC7 482 aaKnown RBP6.83□□□□□ -1.32
HERC3-213ENST00000598772 ABCA3Q99758 1704 aa6.83□□□□□ -1.32
HERC3-213ENST00000598772 CROCC2H7BZ55 1655 aa6.82□□□□□ -1.32
HERC3-213ENST00000598772 CTCFP49711 727 aaPredicted RBP6.82□□□□□ -1.32
HERC3-213ENST00000598772 LBX1P52954 281 aa6.82□□□□□ -1.32
HERC3-213ENST00000598772 TOM1L2Q6ZVM7 507 aa6.82□□□□□ -1.32
HERC3-213ENST00000598772 DAPK1P53355 1430 aa6.82□□□□□ -1.32
HERC3-213ENST00000598772 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 KIF1AQ12756 1690 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 KANK4Q5T7N3 995 aaPredicted RBP6.81□□□□□ -1.32
HERC3-213ENST00000598772 SMC1BQ8NDV3 1235 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 LRRC4BQ9NT99 713 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 ZBTB12Q9Y330 459 aaPredicted RBP6.81□□□□□ -1.32
HERC3-213ENST00000598772 CD2APQ9Y5K6 639 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 ANKRD50Q9ULJ7 1429 aa6.81□□□□□ -1.32
HERC3-213ENST00000598772 PNPLA7Q6ZV29 1317 aa6.8□□□□□ -1.32
HERC3-213ENST00000598772 IGSF1Q8N6C5 1336 aa6.8□□□□□ -1.32
HERC3-213ENST00000598772 RGPD8O14715 1765 aaPredicted RBP6.8□□□□□ -1.32
HERC3-213ENST00000598772 EXOC5O00471 708 aa6.8□□□□□ -1.32
HERC3-213ENST00000598772 FAM50AQ14320 339 aaKnown RBP6.8□□□□□ -1.32
HERC3-213ENST00000598772 NUP155O75694 1391 aa6.8□□□□□ -1.32
HERC3-213ENST00000598772 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
HERC3-213ENST00000598772 RGS19P49795 217 aa6.79□□□□□ -1.32
HERC3-213ENST00000598772 PDE4DIPQ5VU43 2346 aa6.79□□□□□ -1.32
HERC3-213ENST00000598772 NRXN1Q9ULB1 1477 aa6.79□□□□□ -1.32
HERC3-213ENST00000598772 SBF2Q86WG5 1849 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 E9PCH4 1651 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 RGPD3A6NKT7 1758 aaPredicted RBP6.78□□□□□ -1.32
HERC3-213ENST00000598772 RGPD4Q7Z3J3 1758 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 POGKQ9P215 609 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 BCS1LQ9Y276 419 aa6.78□□□□□ -1.32
HERC3-213ENST00000598772 TOPAZ1Q8N9V7 1692 aa6.77□□□□□ -1.32
HERC3-213ENST00000598772 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
HERC3-213ENST00000598772 CSB-PGBD3P0DP91 1061 aa6.77□□□□□ -1.33
HERC3-213ENST00000598772 COL23A1Q86Y22 540 aaPredicted RBP6.77□□□□□ -1.33
HERC3-213ENST00000598772 ATP7BP35670 1465 aa6.77□□□□□ -1.33
HERC3-213ENST00000598772 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
HERC3-213ENST00000598772 ARHGEF28Q8N1W1 1705 aaKnown RBP6.76□□□□□ -1.33
HERC3-213ENST00000598772 FMN2Q9NZ56 1722 aa6.76□□□□□ -1.33
HERC3-213ENST00000598772 TULP4Q9NRJ4 1543 aa6.76□□□□□ -1.33
HERC3-213ENST00000598772 ANKRD30BQ9BXX2 1392 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 DLL1O00548 723 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 RGL3Q3MIN7 710 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 ABTB2Q8N961 1025 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
HERC3-213ENST00000598772 DCBLD2Q96PD2 775 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 PRAM1Q96QH2 718 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 PRAG1Q86YV5 1406 aa6.75□□□□□ -1.33
HERC3-213ENST00000598772 TNRC18O15417 2968 aaPredicted RBP6.75□□□□□ -1.33
HERC3-213ENST00000598772 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
HERC3-213ENST00000598772 PEAK1Q9H792 1746 aa6.74□□□□□ -1.33
HERC3-213ENST00000598772 SLC27A3Q5K4L6 730 aa6.74□□□□□ -1.33
HERC3-213ENST00000598772 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
HERC3-213ENST00000598772 CRB1P82279 1406 aa6.74□□□□□ -1.33
HERC3-213ENST00000598772 ADGRF5Q8IZF2 1346 aa6.74□□□□□ -1.33
HERC3-213ENST00000598772 PARP4Q9UKK3 1724 aaKnown RBP6.73□□□□□ -1.33
HERC3-213ENST00000598772 KIAA1210Q9ULL0 1709 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 KCPQ6ZWJ8 1503 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 A0A0G2JLW4 131 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 FCHSD2O94868 740 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 SMIM5Q71RC9 77 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
HERC3-213ENST00000598772 USP6P35125 1406 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 RPGRIP1LQ68CZ1 1315 aa6.73□□□□□ -1.33
HERC3-213ENST00000598772 MINK1Q8N4C8 1332 aaPredicted RBP6.73□□□□□ -1.33
HERC3-213ENST00000598772 ABCC11Q96J66 1382 aa6.72□□□□□ -1.33
HERC3-213ENST00000598772 GCP02774 474 aa6.72□□□□□ -1.33
HERC3-213ENST00000598772 HSPA8P11142 646 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms