RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 PEAK1Q9H792 1746 aa22.95■■□□□ 1.26
LIM2-202ENST00000596399 DDB1Q16531 1140 aa22.94■■□□□ 1.26
LIM2-202ENST00000596399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.94■■□□□ 1.26
LIM2-202ENST00000596399 CARD11Q9BXL7 1154 aa22.94■■□□□ 1.26
LIM2-202ENST00000596399 TTC21AQ8NDW8 1320 aa22.93■■□□□ 1.26
LIM2-202ENST00000596399 KCNH5Q8NCM2 988 aa22.93■■□□□ 1.26
LIM2-202ENST00000596399 NFAT5O94916 1531 aa22.92■■□□□ 1.26
LIM2-202ENST00000596399 OVOS2A0A0G2JMS6 1433 aa22.92■■□□□ 1.26
LIM2-202ENST00000596399 OVOS2A0A0J9YW53 1432 aa22.92■■□□□ 1.26
LIM2-202ENST00000596399 OVOS2Q6IE36 1432 aa22.92■■□□□ 1.26
LIM2-202ENST00000596399 CSB-PGBD3P0DP91 1061 aa22.91■■□□□ 1.26
LIM2-202ENST00000596399 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
LIM2-202ENST00000596399 NME9Q86XW9 330 aa22.9■■□□□ 1.26
LIM2-202ENST00000596399 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
LIM2-202ENST00000596399 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
LIM2-202ENST00000596399 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.26
LIM2-202ENST00000596399 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
LIM2-202ENST00000596399 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
LIM2-202ENST00000596399 NBPF14Q5TI25 921 aa22.88■■□□□ 1.25
LIM2-202ENST00000596399 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
LIM2-202ENST00000596399 SLC12A5Q9H2X9 1139 aa22.88■■□□□ 1.25
LIM2-202ENST00000596399 SBNO2Q9Y2G9 1366 aa22.88■■□□□ 1.25
LIM2-202ENST00000596399 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
LIM2-202ENST00000596399 BCL11BQ9C0K0 894 aaPredicted RBP22.84■■□□□ 1.25
LIM2-202ENST00000596399 USP31Q70CQ4 1352 aa22.84■■□□□ 1.25
LIM2-202ENST00000596399 C11orf95C9JLR9 678 aaPredicted RBP22.83■■□□□ 1.25
LIM2-202ENST00000596399 PLSCR1O15162 318 aa22.83■■□□□ 1.25
LIM2-202ENST00000596399 PROM2Q8N271 834 aa22.83■■□□□ 1.25
LIM2-202ENST00000596399 ANO8Q9HCE9 1232 aaPredicted RBP22.83■■□□□ 1.25
LIM2-202ENST00000596399 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
LIM2-202ENST00000596399 A0A1W2PP64 1363 aa22.8■■□□□ 1.24
LIM2-202ENST00000596399 EXOC5O00471 708 aa22.8■■□□□ 1.24
LIM2-202ENST00000596399 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
LIM2-202ENST00000596399 USP54Q70EL1 1684 aa22.79■■□□□ 1.24
LIM2-202ENST00000596399 KCNQ2O43526 872 aa22.79■■□□□ 1.24
LIM2-202ENST00000596399 PDGFDQ9GZP0 370 aaPredicted RBP22.79■■□□□ 1.24
LIM2-202ENST00000596399 NLRP2Q9NX02 1062 aa22.79■■□□□ 1.24
LIM2-202ENST00000596399 ERBB3P21860 1342 aa22.79■■□□□ 1.24
LIM2-202ENST00000596399 LTN1O94822 1766 aa22.78■■□□□ 1.24
LIM2-202ENST00000596399 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
LIM2-202ENST00000596399 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
LIM2-202ENST00000596399 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
LIM2-202ENST00000596399 BCL9O00512 1426 aa22.77■■□□□ 1.24
LIM2-202ENST00000596399 ABCC6O95255 1503 aa22.77■■□□□ 1.24
LIM2-202ENST00000596399 EDC4Q6P2E9 1401 aaKnown RBP22.76■■□□□ 1.23
LIM2-202ENST00000596399 ST20-MTHFSA0A0A6YYL1 179 aa22.76■■□□□ 1.23
LIM2-202ENST00000596399 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
LIM2-202ENST00000596399 TESK2Q96S53 571 aa22.76■■□□□ 1.23
LIM2-202ENST00000596399 TNS2Q63HR2 1409 aa22.75■■□□□ 1.23
LIM2-202ENST00000596399 ACSBG1Q96GR2 724 aa22.75■■□□□ 1.23
LIM2-202ENST00000596399 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
LIM2-202ENST00000596399 TERF2IPQ9NYB0 399 aa22.75■■□□□ 1.23
LIM2-202ENST00000596399 FBLN1P23142 703 aa22.73■■□□□ 1.23
LIM2-202ENST00000596399 TXNRD1Q16881 649 aa22.73■■□□□ 1.23
LIM2-202ENST00000596399 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
LIM2-202ENST00000596399 IL2RBP14784 551 aa22.71■■□□□ 1.23
LIM2-202ENST00000596399 CASZ1Q86V15 1759 aa22.71■■□□□ 1.23
LIM2-202ENST00000596399 LTV1Q96GA3 475 aaPredicted RBP22.7■■□□□ 1.22
LIM2-202ENST00000596399 PUS7Q96PZ0 661 aaKnown RBP22.7■■□□□ 1.22
LIM2-202ENST00000596399 ZBTB7AO95365 584 aa22.69■■□□□ 1.22
LIM2-202ENST00000596399 NHSQ6T4R5 1651 aa22.68■■□□□ 1.22
LIM2-202ENST00000596399 IP6K1Q92551 441 aa22.67■■□□□ 1.22
LIM2-202ENST00000596399 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
LIM2-202ENST00000596399 SLC15A2Q16348 729 aa22.65■■□□□ 1.22
LIM2-202ENST00000596399 STK32BQ9NY57 414 aa22.65■■□□□ 1.22
LIM2-202ENST00000596399 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.22
LIM2-202ENST00000596399 COG3Q96JB2 828 aa22.64■■□□□ 1.21
LIM2-202ENST00000596399 DDX54Q8TDD1 881 aaKnown RBP22.63■■□□□ 1.21
LIM2-202ENST00000596399 PTGER2P43116 358 aa22.62■■□□□ 1.21
LIM2-202ENST00000596399 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
LIM2-202ENST00000596399 BTAF1O14981 1849 aa22.61■■□□□ 1.21
LIM2-202ENST00000596399 HOXC9P31274 260 aa22.61■■□□□ 1.21
LIM2-202ENST00000596399 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
LIM2-202ENST00000596399 MYOM1P52179 1685 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 RGPD2P0DJD1 1756 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 AMPHP49418 695 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
LIM2-202ENST00000596399 GGNBP2Q9H3C7 697 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 LRRC4BQ9NT99 713 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 ANKRD36BQ8N2N9 1353 aa22.59■■□□□ 1.21
LIM2-202ENST00000596399 USP47Q96K76 1375 aa22.58■■□□□ 1.21
LIM2-202ENST00000596399 FYB1O15117 783 aa22.57■■□□□ 1.2
LIM2-202ENST00000596399 ZNF827Q17R98 1081 aa22.57■■□□□ 1.2
LIM2-202ENST00000596399 PAPPAQ13219 1627 aa22.57■■□□□ 1.2
LIM2-202ENST00000596399 KAT6BQ8WYB5 2073 aa22.56■■□□□ 1.2
LIM2-202ENST00000596399 FAM208AQ9UK61 1670 aaKnown RBP22.56■■□□□ 1.2
LIM2-202ENST00000596399 YY1P25490 414 aa22.56■■□□□ 1.2
LIM2-202ENST00000596399 KCNQ4P56696 695 aa22.55■■□□□ 1.2
LIM2-202ENST00000596399 TMF1P82094 1093 aa22.55■■□□□ 1.2
LIM2-202ENST00000596399 USHBP1Q8N6Y0 703 aa22.55■■□□□ 1.2
LIM2-202ENST00000596399 MEGF6O75095 1541 aa22.54■■□□□ 1.2
LIM2-202ENST00000596399 SLC24A1O60721 1099 aa22.53■■□□□ 1.2
LIM2-202ENST00000596399 NBPF6Q5VWK0 638 aa22.53■■□□□ 1.2
LIM2-202ENST00000596399 SYTL4Q96C24 671 aaPredicted RBP22.53■■□□□ 1.2
LIM2-202ENST00000596399 NBPF4Q96M43 638 aa22.53■■□□□ 1.2
LIM2-202ENST00000596399 SGIP1Q9BQI5 828 aa22.53■■□□□ 1.2
LIM2-202ENST00000596399 MTFR1LQ9H019 292 aa22.53■■□□□ 1.2
LIM2-202ENST00000596399 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
LIM2-202ENST00000596399 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
LIM2-202ENST00000596399 FHDC1Q9C0D6 1143 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms