RNA–Protein interactions for RNA: ENST00000595936.1

LRMDA-211, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-211ENST00000595936 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
LRMDA-211ENST00000595936 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
LRMDA-211ENST00000595936 USP6P35125 1406 aa16.89■□□□□ 0.29
LRMDA-211ENST00000595936 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
LRMDA-211ENST00000595936 SLIT3O75094 1523 aa16.88■□□□□ 0.29
LRMDA-211ENST00000595936 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
LRMDA-211ENST00000595936 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
LRMDA-211ENST00000595936 UTRNP46939 3433 aa16.87■□□□□ 0.29
LRMDA-211ENST00000595936 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
LRMDA-211ENST00000595936 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
LRMDA-211ENST00000595936 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
LRMDA-211ENST00000595936 KCNH5Q8NCM2 988 aa16.86■□□□□ 0.29
LRMDA-211ENST00000595936 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
LRMDA-211ENST00000595936 STK32BQ9NY57 414 aa16.85■□□□□ 0.29
LRMDA-211ENST00000595936 MARCH10Q8NA82 808 aaPredicted RBP16.84■□□□□ 0.29
LRMDA-211ENST00000595936 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
LRMDA-211ENST00000595936 CARD10Q9BWT7 1032 aa16.84■□□□□ 0.29
LRMDA-211ENST00000595936 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
LRMDA-211ENST00000595936 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
LRMDA-211ENST00000595936 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
LRMDA-211ENST00000595936 PROM2Q8N271 834 aa16.83■□□□□ 0.28
LRMDA-211ENST00000595936 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 EXOC5O00471 708 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 ZBTB7AO95365 584 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 PTGER2P43116 358 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 ARHGEF25Q86VW2 580 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
LRMDA-211ENST00000595936 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
LRMDA-211ENST00000595936 SLC15A2Q16348 729 aa16.81■□□□□ 0.28
LRMDA-211ENST00000595936 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
LRMDA-211ENST00000595936 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
LRMDA-211ENST00000595936 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
LRMDA-211ENST00000595936 COL18A1P39060 1754 aa16.79■□□□□ 0.28
LRMDA-211ENST00000595936 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
LRMDA-211ENST00000595936 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
LRMDA-211ENST00000595936 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
LRMDA-211ENST00000595936 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
LRMDA-211ENST00000595936 ABCC6O95255 1503 aa16.79■□□□□ 0.28
LRMDA-211ENST00000595936 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
LRMDA-211ENST00000595936 TTC21BQ7Z4L5 1316 aa16.78■□□□□ 0.28
LRMDA-211ENST00000595936 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
LRMDA-211ENST00000595936 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
LRMDA-211ENST00000595936 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
LRMDA-211ENST00000595936 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
LRMDA-211ENST00000595936 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
LRMDA-211ENST00000595936 MYOM1P52179 1685 aa16.76■□□□□ 0.27
LRMDA-211ENST00000595936 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
LRMDA-211ENST00000595936 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
LRMDA-211ENST00000595936 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
LRMDA-211ENST00000595936 ARXQ96QS3 562 aa16.73■□□□□ 0.27
LRMDA-211ENST00000595936 SOX12O15370 315 aa16.72■□□□□ 0.27
LRMDA-211ENST00000595936 NFAT5O94916 1531 aa16.71■□□□□ 0.27
LRMDA-211ENST00000595936 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
LRMDA-211ENST00000595936 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
LRMDA-211ENST00000595936 IL2RBP14784 551 aa16.7■□□□□ 0.26
LRMDA-211ENST00000595936 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
LRMDA-211ENST00000595936 ERBB3P21860 1342 aa16.7■□□□□ 0.26
LRMDA-211ENST00000595936 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
LRMDA-211ENST00000595936 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
LRMDA-211ENST00000595936 C1QTNF8P60827 252 aa16.68■□□□□ 0.26
LRMDA-211ENST00000595936 L3MBTL2Q969R5 705 aa16.68■□□□□ 0.26
LRMDA-211ENST00000595936 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
LRMDA-211ENST00000595936 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
LRMDA-211ENST00000595936 CHD4Q14839 1912 aa16.67■□□□□ 0.26
LRMDA-211ENST00000595936 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
LRMDA-211ENST00000595936 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
LRMDA-211ENST00000595936 ACSBG1Q96GR2 724 aa16.67■□□□□ 0.26
LRMDA-211ENST00000595936 PAPPAQ13219 1627 aa16.67■□□□□ 0.26
LRMDA-211ENST00000595936 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
LRMDA-211ENST00000595936 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
LRMDA-211ENST00000595936 POLD1P28340 1107 aa16.65■□□□□ 0.26
LRMDA-211ENST00000595936 GPR162Q16538 588 aa16.65■□□□□ 0.26
LRMDA-211ENST00000595936 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.26
LRMDA-211ENST00000595936 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
LRMDA-211ENST00000595936 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
LRMDA-211ENST00000595936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.251e-8■■■■■ 29.5
LRMDA-211ENST00000595936 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
LRMDA-211ENST00000595936 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
LRMDA-211ENST00000595936 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
LRMDA-211ENST00000595936 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
LRMDA-211ENST00000595936 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
LRMDA-211ENST00000595936 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
LRMDA-211ENST00000595936 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
LRMDA-211ENST00000595936 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
LRMDA-211ENST00000595936 BTAF1O14981 1849 aa16.6■□□□□ 0.25
LRMDA-211ENST00000595936 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
LRMDA-211ENST00000595936 NME9Q86XW9 330 aa16.59■□□□□ 0.25
LRMDA-211ENST00000595936 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
LRMDA-211ENST00000595936 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
LRMDA-211ENST00000595936 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
LRMDA-211ENST00000595936 QSER1Q2KHR3 1735 aa16.57■□□□□ 0.24
LRMDA-211ENST00000595936 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
LRMDA-211ENST00000595936 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
LRMDA-211ENST00000595936 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
LRMDA-211ENST00000595936 IP6K1Q92551 441 aa16.57■□□□□ 0.24
LRMDA-211ENST00000595936 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
LRMDA-211ENST00000595936 CD163L1Q9NR16 1453 aa16.56■□□□□ 0.24
LRMDA-211ENST00000595936 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms