RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
SHKBP1-206ENST00000595523 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-206ENST00000595523 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-206ENST00000595523 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
SHKBP1-206ENST00000595523 PARP4Q9UKK3 1724 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-206ENST00000595523 CARD14Q9BXL6 1004 aa15.32■□□□□ 0.04
SHKBP1-206ENST00000595523 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
SHKBP1-206ENST00000595523 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-206ENST00000595523 CRB1P82279 1406 aa15.3■□□□□ 0.04
SHKBP1-206ENST00000595523 NSD3Q9BZ95 1437 aa15.3■□□□□ 0.04
SHKBP1-206ENST00000595523 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
SHKBP1-206ENST00000595523 LRRC37A3O60309 1634 aa15.29■□□□□ 0.04
SHKBP1-206ENST00000595523 FYB1O15117 783 aa15.29■□□□□ 0.04
SHKBP1-206ENST00000595523 EVA1CP58658 441 aa15.29■□□□□ 0.04
SHKBP1-206ENST00000595523 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
SHKBP1-206ENST00000595523 MAP2P11137 1827 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-206ENST00000595523 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
SHKBP1-206ENST00000595523 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-206ENST00000595523 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
SHKBP1-206ENST00000595523 BARGINQ6ZT62 677 aa15.27■□□□□ 0.04
SHKBP1-206ENST00000595523 GGNBP2Q9H3C7 697 aa15.27■□□□□ 0.04
SHKBP1-206ENST00000595523 A0A0G2JS52 829 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 FBLN1P23142 703 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 MYT1Q01538 1121 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 COG3Q96JB2 828 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-206ENST00000595523 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
SHKBP1-206ENST00000595523 ERBB3P21860 1342 aa15.24■□□□□ 0.03
SHKBP1-206ENST00000595523 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-206ENST00000595523 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-206ENST00000595523 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
SHKBP1-206ENST00000595523 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
SHKBP1-206ENST00000595523 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
SHKBP1-206ENST00000595523 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
SHKBP1-206ENST00000595523 DISP2A7MBM2 1401 aa15.23■□□□□ 0.03
SHKBP1-206ENST00000595523 KIF7Q2M1P5 1343 aa15.22■□□□□ 0.03
SHKBP1-206ENST00000595523 IP6K1Q92551 441 aa15.21■□□□□ 0.03
SHKBP1-206ENST00000595523 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.03
SHKBP1-206ENST00000595523 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
SHKBP1-206ENST00000595523 HOXC9P31274 260 aa15.2■□□□□ 0.02
SHKBP1-206ENST00000595523 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-206ENST00000595523 PANK3Q9H999 370 aa15.2■□□□□ 0.02
SHKBP1-206ENST00000595523 RTL1A6NKG5 1358 aa15.2■□□□□ 0.02
SHKBP1-206ENST00000595523 CGNL1Q0VF96 1302 aa15.19■□□□□ 0.02
SHKBP1-206ENST00000595523 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
SHKBP1-206ENST00000595523 SHANK3Q9BYB0 1731 aa15.18■□□□□ 0.02
SHKBP1-206ENST00000595523 CCDC7Q96M83 1385 aa15.18■□□□□ 0.02
SHKBP1-206ENST00000595523 CCDC125Q86Z20 511 aa15.17■□□□□ 0.02
SHKBP1-206ENST00000595523 AMPHP49418 695 aa15.16■□□□□ 0.02
SHKBP1-206ENST00000595523 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
SHKBP1-206ENST00000595523 WASHC2AQ641Q2 1341 aa15.16■□□□□ 0.02
SHKBP1-206ENST00000595523 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
SHKBP1-206ENST00000595523 TNS2Q63HR2 1409 aa15.15■□□□□ 0.02
SHKBP1-206ENST00000595523 FLT4P35916 1363 aa15.14■□□□□ 0.01
SHKBP1-206ENST00000595523 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
SHKBP1-206ENST00000595523 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
SHKBP1-206ENST00000595523 LTV1Q96GA3 475 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-206ENST00000595523 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 NSD2O96028 1365 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 INSRP06213 1382 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 FAM196AQ6ZSG2 479 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 DEFB132Q7Z7B7 95 aa15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 CDCA7Q9BWT1 371 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-206ENST00000595523 MARCH10Q8NA82 808 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-206ENST00000595523 RREB1Q92766 1687 aa15.12■□□□□ 0.01
SHKBP1-206ENST00000595523 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-206ENST00000595523 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
SHKBP1-206ENST00000595523 MEGF6O75095 1541 aa15.11■□□□□ 0.01
SHKBP1-206ENST00000595523 RGPD3A6NKT7 1758 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-206ENST00000595523 RGPD4Q7Z3J3 1758 aa15.11■□□□□ 0.01
SHKBP1-206ENST00000595523 BCL9O00512 1426 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 TRIM37O94972 964 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 IL2RBP14784 551 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 NBPF6Q5VWK0 638 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 NBPF4Q96M43 638 aa15.1■□□□□ 0.01
SHKBP1-206ENST00000595523 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
SHKBP1-206ENST00000595523 EXOC5O00471 708 aa15.08■□□□□ 0
SHKBP1-206ENST00000595523 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0
SHKBP1-206ENST00000595523 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0
SHKBP1-206ENST00000595523 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
SHKBP1-206ENST00000595523 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
SHKBP1-206ENST00000595523 USHBP1Q8N6Y0 703 aa15.07■□□□□ 0
SHKBP1-206ENST00000595523 BTAF1O14981 1849 aa15.07■□□□□ 0
SHKBP1-206ENST00000595523 EN1Q05925 392 aaPredicted RBP15.06■□□□□ 0
SHKBP1-206ENST00000595523 BAG6P46379 1132 aa15.05■□□□□ -0
SHKBP1-206ENST00000595523 MORC1Q86VD1 984 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms