RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 RGPD1P0DJD0 1748 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 PARP4Q9UKK3 1724 aaKnown RBP8.28□□□□□ -1.08
SSX4B-201ENST00000595235 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
SSX4B-201ENST00000595235 CLSPNQ9HAW4 1339 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 ZBTB7CA1YPR0 619 aa8.27□□□□□ -1.09
SSX4B-201ENST00000595235 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
SSX4B-201ENST00000595235 KRT27Q7Z3Y8 459 aa8.27□□□□□ -1.09
SSX4B-201ENST00000595235 TMC1Q8TDI8 760 aa8.27□□□□□ -1.09
SSX4B-201ENST00000595235 ZRANB1Q9UGI0 708 aa8.27□□□□□ -1.09
SSX4B-201ENST00000595235 LRRC37A3O60309 1634 aa8.27□□□□□ -1.09
SSX4B-201ENST00000595235 EDC4Q6P2E9 1401 aaKnown RBP8.27□□□□□ -1.09
SSX4B-201ENST00000595235 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 USP31Q70CQ4 1352 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 ABCC6O95255 1503 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 SOX12O15370 315 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 NME9Q86XW9 330 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSX4B-201ENST00000595235 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 CRB1P82279 1406 aa8.26□□□□□ -1.09
SSX4B-201ENST00000595235 EVA1CP58658 441 aa8.25□□□□□ -1.09
SSX4B-201ENST00000595235 HDGFL2Q7Z4V5 671 aaPredicted RBP8.25□□□□□ -1.09
SSX4B-201ENST00000595235 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
SSX4B-201ENST00000595235 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
SSX4B-201ENST00000595235 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
SSX4B-201ENST00000595235 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
SSX4B-201ENST00000595235 KIF20BQ96Q89 1820 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 NINLQ9Y2I6 1382 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 ARHGEF25Q86VW2 580 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 CCDC125Q86Z20 511 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 KCNH5Q8NCM2 988 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
SSX4B-201ENST00000595235 ANKRD36BQ8N2N9 1353 aa8.23□□□□□ -1.09
SSX4B-201ENST00000595235 EP400Q96L91 3159 aa8.23□□□□□ -1.09
SSX4B-201ENST00000595235 TCP11L2Q8N4U5 519 aa8.23□□□□□ -1.09
SSX4B-201ENST00000595235 CCER1Q8TC90 406 aaPredicted RBP8.23□□□□□ -1.09
SSX4B-201ENST00000595235 TERF2IPQ9NYB0 399 aa8.23□□□□□ -1.09
SSX4B-201ENST00000595235 TMF1P82094 1093 aa8.22□□□□□ -1.09
SSX4B-201ENST00000595235 THRAP3Q9Y2W1 955 aaKnown RBP8.22□□□□□ -1.09
SSX4B-201ENST00000595235 WDR17Q8IZU2 1322 aa8.22□□□□□ -1.09
SSX4B-201ENST00000595235 SBF2Q86WG5 1849 aa8.22□□□□□ -1.09
SSX4B-201ENST00000595235 DISP2A7MBM2 1401 aa8.21□□□□□ -1.09
SSX4B-201ENST00000595235 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.09
SSX4B-201ENST00000595235 ZBTB22O15209 634 aa8.21□□□□□ -1.1
SSX4B-201ENST00000595235 TOM1L2Q6ZVM7 507 aa8.21□□□□□ -1.1
SSX4B-201ENST00000595235 RREB1Q92766 1687 aa8.21□□□□□ -1.1
SSX4B-201ENST00000595235 RGPD2P0DJD1 1756 aa8.2□□□□□ -1.1
SSX4B-201ENST00000595235 SLC24A1O60721 1099 aa8.2□□□□□ -1.1
SSX4B-201ENST00000595235 ABCB7O75027 752 aa8.2□□□□□ -1.1
SSX4B-201ENST00000595235 DSG3P32926 999 aa8.2□□□□□ -1.1
SSX4B-201ENST00000595235 SF3B2Q13435 895 aaKnown RBP8.2□□□□□ -1.1
SSX4B-201ENST00000595235 NUP188Q5SRE5 1749 aa8.2□□□□□ -1.1
SSX4B-201ENST00000595235 TRIM37O94972 964 aa8.19□□□□□ -1.1
SSX4B-201ENST00000595235 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
SSX4B-201ENST00000595235 PDE3BQ13370 1112 aa8.19□□□□□ -1.1
SSX4B-201ENST00000595235 ERBB3P21860 1342 aa8.19□□□□□ -1.1
SSX4B-201ENST00000595235 ANKRD26Q9UPS8 1709 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 FBLN1P23142 703 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 BAG6P46379 1132 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 EN1Q05925 392 aaPredicted RBP8.18□□□□□ -1.1
SSX4B-201ENST00000595235 FAM196AQ6ZSG2 479 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 GGNBP2Q9H3C7 697 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 CCDC7Q96M83 1385 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 OVOS2A0A0G2JMS6 1433 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 TNS2Q63HR2 1409 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 NSD3Q9BZ95 1437 aa8.18□□□□□ -1.1
SSX4B-201ENST00000595235 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 RGPD3A6NKT7 1758 aaPredicted RBP8.17□□□□□ -1.1
SSX4B-201ENST00000595235 RGPD4Q7Z3J3 1758 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 FYB1O15117 783 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
SSX4B-201ENST00000595235 DDB1Q16531 1140 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 COG3Q96JB2 828 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 MAP3K19Q56UN5 1328 aa8.17□□□□□ -1.1
SSX4B-201ENST00000595235 EZH2Q15910 746 aaKnown RBP8.16□□□□□ -1.1
SSX4B-201ENST00000595235 NHSQ6T4R5 1651 aa8.16□□□□□ -1.1
SSX4B-201ENST00000595235 MARCH10Q8NA82 808 aaPredicted RBP8.16□□□□□ -1.1
SSX4B-201ENST00000595235 LRP5O75197 1615 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 RTL1A6NKG5 1358 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 APBA3O96018 575 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 HOXC9P31274 260 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 EIF4G2P78344 907 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSX4B-201ENST00000595235 RRS1Q15050 365 aaKnown RBP8.15□□□□□ -1.1
SSX4B-201ENST00000595235 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 IP6K1Q92551 441 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 CAMKK2Q96RR4 588 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.1
SSX4B-201ENST00000595235 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.1
SSX4B-201ENST00000595235 BCL9O00512 1426 aa8.14□□□□□ -1.11
SSX4B-201ENST00000595235 PSDA5PKW4 1024 aaPredicted RBP8.14□□□□□ -1.11
SSX4B-201ENST00000595235 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
SSX4B-201ENST00000595235 POLR3GLQ9BT43 218 aa8.14□□□□□ -1.11
SSX4B-201ENST00000595235 DOT1LQ8TEK3 1739 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms