RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 SLIT2O94813 1529 aa12.61□□□□□ -0.39
ZNF548-203ENST00000594668 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.6□□□□□ -0.39
ZNF548-203ENST00000594668 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-203ENST00000594668 PPP2R1AP30153 589 aa12.6□□□□□ -0.39
ZNF548-203ENST00000594668 HOXC9P31274 260 aa12.6□□□□□ -0.39
ZNF548-203ENST00000594668 AMPHP49418 695 aa12.6□□□□□ -0.39
ZNF548-203ENST00000594668 IP6K1Q92551 441 aa12.6□□□□□ -0.39
ZNF548-203ENST00000594668 AFF2P51816 1311 aa12.6□□□□□ -0.39
ZNF548-203ENST00000594668 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
ZNF548-203ENST00000594668 MTHFSP49914 203 aa12.59□□□□□ -0.39
ZNF548-203ENST00000594668 RALBP1Q15311 655 aa12.59□□□□□ -0.39
ZNF548-203ENST00000594668 HSP90AB2PQ58FF8 381 aa12.59□□□□□ -0.39
ZNF548-203ENST00000594668 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-203ENST00000594668 ABCC6O95255 1503 aa12.58□□□□□ -0.4
ZNF548-203ENST00000594668 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-203ENST00000594668 USP21Q9UK80 565 aa12.58□□□□□ -0.4
ZNF548-203ENST00000594668 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
ZNF548-203ENST00000594668 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
ZNF548-203ENST00000594668 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-203ENST00000594668 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 FLT4P35916 1363 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 EVA1CP58658 441 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-203ENST00000594668 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 INSRP06213 1382 aa12.56□□□□□ -0.4
ZNF548-203ENST00000594668 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-203ENST00000594668 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
ZNF548-203ENST00000594668 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
ZNF548-203ENST00000594668 ANP32CO43423 234 aa12.55□□□□□ -0.4
ZNF548-203ENST00000594668 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
ZNF548-203ENST00000594668 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
ZNF548-203ENST00000594668 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
ZNF548-203ENST00000594668 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
ZNF548-203ENST00000594668 ERBB3P21860 1342 aa12.54□□□□□ -0.4
ZNF548-203ENST00000594668 MYBBP1AQ9BQG0 1328 aaKnown RBP12.54□□□□□ -0.4
ZNF548-203ENST00000594668 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
ZNF548-203ENST00000594668 ZNF772Q68DY9 489 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-203ENST00000594668 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-203ENST00000594668 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
ZNF548-203ENST00000594668 ATRNO75882 1429 aa12.53□□□□□ -0.4
ZNF548-203ENST00000594668 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
ZNF548-203ENST00000594668 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 IL13P35225 146 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 VPS72Q15906 364 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
ZNF548-203ENST00000594668 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 GLI3P10071 1580 aa12.52□□□□□ -0.41
ZNF548-203ENST00000594668 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
ZNF548-203ENST00000594668 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 CRB1P82279 1406 aa12.51□□□□□ -0.41
ZNF548-203ENST00000594668 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
ZNF548-203ENST00000594668 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-203ENST00000594668 EYA1Q99502 592 aa12.5□□□□□ -0.41
ZNF548-203ENST00000594668 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
ZNF548-203ENST00000594668 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
ZNF548-203ENST00000594668 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
ZNF548-203ENST00000594668 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
ZNF548-203ENST00000594668 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
ZNF548-203ENST00000594668 CARD10Q9BWT7 1032 aa12.49□□□□□ -0.41
ZNF548-203ENST00000594668 MIER1Q8N108 512 aa12.47□□□□□ -0.41
ZNF548-203ENST00000594668 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
ZNF548-203ENST00000594668 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
ZNF548-203ENST00000594668 RXRBP28702 533 aa12.46□□□□□ -0.41
ZNF548-203ENST00000594668 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
ZNF548-203ENST00000594668 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
ZNF548-203ENST00000594668 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
ZNF548-203ENST00000594668 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
ZNF548-203ENST00000594668 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-203ENST00000594668 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
ZNF548-203ENST00000594668 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
ZNF548-203ENST00000594668 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
ZNF548-203ENST00000594668 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
ZNF548-203ENST00000594668 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
ZNF548-203ENST00000594668 HMOX1P09601 288 aa12.44□□□□□ -0.42
ZNF548-203ENST00000594668 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
ZNF548-203ENST00000594668 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
ZNF548-203ENST00000594668 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
ZNF548-203ENST00000594668 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
ZNF548-203ENST00000594668 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
ZNF548-203ENST00000594668 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 MEGF6O75095 1541 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-203ENST00000594668 IL2RBP14784 551 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF548-203ENST00000594668 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 KDRP35968 1356 aa12.42□□□□□ -0.42
ZNF548-203ENST00000594668 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
ZNF548-203ENST00000594668 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
ZNF548-203ENST00000594668 RGS12O14924 1447 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms