RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 BARGINQ6ZT62 677 aa24.14■■□□□ 1.45
IRF3-208ENST00000594387 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
IRF3-208ENST00000594387 ANKRD36BQ8N2N9 1353 aa24.14■■□□□ 1.45
IRF3-208ENST00000594387 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
IRF3-208ENST00000594387 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
IRF3-208ENST00000594387 THSD7AQ9UPZ6 1657 aa24.13■■□□□ 1.45
IRF3-208ENST00000594387 CRB1P82279 1406 aa24.12■■□□□ 1.45
IRF3-208ENST00000594387 PDE3BQ13370 1112 aa24.12■■□□□ 1.45
IRF3-208ENST00000594387 COG3Q96JB2 828 aa24.12■■□□□ 1.45
IRF3-208ENST00000594387 BLMP54132 1417 aaPredicted RBP24.1■■□□□ 1.45
IRF3-208ENST00000594387 NFAT5O94916 1531 aa24.1■■□□□ 1.45
IRF3-208ENST00000594387 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
IRF3-208ENST00000594387 AXIN2Q9Y2T1 843 aa24.08■■□□□ 1.45
IRF3-208ENST00000594387 ABCC6O95255 1503 aa24.08■■□□□ 1.45
IRF3-208ENST00000594387 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.44
IRF3-208ENST00000594387 KIF20BQ96Q89 1820 aa24.07■■□□□ 1.44
IRF3-208ENST00000594387 RGPD1P0DJD0 1748 aa24.06■■□□□ 1.44
IRF3-208ENST00000594387 HSPA5P11021 654 aaKnown RBP24.05■■□□□ 1.44
IRF3-208ENST00000594387 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
IRF3-208ENST00000594387 PARP4Q9UKK3 1724 aaKnown RBP24.04■■□□□ 1.44
IRF3-208ENST00000594387 MYOM1P52179 1685 aa24.04■■□□□ 1.44
IRF3-208ENST00000594387 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
IRF3-208ENST00000594387 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
IRF3-208ENST00000594387 CDCA7Q9BWT1 371 aaPredicted RBP24.03■■□□□ 1.44
IRF3-208ENST00000594387 WNK3Q9BYP7 1800 aa24.03■■□□□ 1.44
IRF3-208ENST00000594387 BAG6P46379 1132 aa24.02■■□□□ 1.44
IRF3-208ENST00000594387 FAM182BQ5T319 152 aa24.02■■□□□ 1.44
IRF3-208ENST00000594387 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
IRF3-208ENST00000594387 CARD10Q9BWT7 1032 aa24.01■■□□□ 1.43
IRF3-208ENST00000594387 AMPHP49418 695 aa24■■□□□ 1.43
IRF3-208ENST00000594387 DDB1Q16531 1140 aa24■■□□□ 1.43
IRF3-208ENST00000594387 FYB1O15117 783 aa23.99■■□□□ 1.43
IRF3-208ENST00000594387 GGNBP2Q9H3C7 697 aa23.99■■□□□ 1.43
IRF3-208ENST00000594387 NLRP2Q9NX02 1062 aa23.99■■□□□ 1.43
IRF3-208ENST00000594387 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
IRF3-208ENST00000594387 ANKRD24Q8TF21 1146 aa23.97■■□□□ 1.43
IRF3-208ENST00000594387 IP6K1Q92551 441 aa23.97■■□□□ 1.43
IRF3-208ENST00000594387 FAM208AQ9UK61 1670 aaKnown RBP23.96■■□□□ 1.43
IRF3-208ENST00000594387 ERBB3P21860 1342 aa23.96■■□□□ 1.43
IRF3-208ENST00000594387 DEFB132Q7Z7B7 95 aa23.96■■□□□ 1.43
IRF3-208ENST00000594387 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
IRF3-208ENST00000594387 EXOC5O00471 708 aa23.94■■□□□ 1.42
IRF3-208ENST00000594387 CGNL1Q0VF96 1302 aa23.93■■□□□ 1.42
IRF3-208ENST00000594387 LRRC37A3O60309 1634 aa23.93■■□□□ 1.42
IRF3-208ENST00000594387 TRIM37O94972 964 aa23.93■■□□□ 1.42
IRF3-208ENST00000594387 LTV1Q96GA3 475 aaPredicted RBP23.93■■□□□ 1.42
IRF3-208ENST00000594387 KAT6BQ8WYB5 2073 aa23.93■■□□□ 1.42
IRF3-208ENST00000594387 MAP3K19Q56UN5 1328 aa23.92■■□□□ 1.42
IRF3-208ENST00000594387 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
IRF3-208ENST00000594387 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
IRF3-208ENST00000594387 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
IRF3-208ENST00000594387 HOXC9P31274 260 aa23.9■■□□□ 1.42
IRF3-208ENST00000594387 OVOS2A0A0G2JMS6 1433 aa23.9■■□□□ 1.42
IRF3-208ENST00000594387 SBF2Q86WG5 1849 aa23.89■■□□□ 1.42
IRF3-208ENST00000594387 APBA3O96018 575 aa23.89■■□□□ 1.41
IRF3-208ENST00000594387 IL2RBP14784 551 aa23.89■■□□□ 1.41
IRF3-208ENST00000594387 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.41
IRF3-208ENST00000594387 RTL1A6NKG5 1358 aa23.89■■□□□ 1.41
IRF3-208ENST00000594387 FBLN1P23142 703 aa23.88■■□□□ 1.41
IRF3-208ENST00000594387 SMG6Q86US8 1419 aaKnown RBP23.87■■□□□ 1.41
IRF3-208ENST00000594387 EN1Q05925 392 aaPredicted RBP23.87■■□□□ 1.41
IRF3-208ENST00000594387 RGPD2P0DJD1 1756 aa23.87■■□□□ 1.41
IRF3-208ENST00000594387 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
IRF3-208ENST00000594387 PANK3Q9H999 370 aa23.86■■□□□ 1.41
IRF3-208ENST00000594387 EP400Q96L91 3159 aa23.86■■□□□ 1.41
IRF3-208ENST00000594387 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
IRF3-208ENST00000594387 KIF24Q5T7B8 1368 aa23.83■■□□□ 1.41
IRF3-208ENST00000594387 PEAK1Q9H792 1746 aa23.83■■□□□ 1.41
IRF3-208ENST00000594387 PPM1GO15355 546 aaPredicted RBP23.82■■□□□ 1.4
IRF3-208ENST00000594387 MARCH10Q8NA82 808 aaPredicted RBP23.82■■□□□ 1.4
IRF3-208ENST00000594387 FLT4P35916 1363 aa23.81■■□□□ 1.4
IRF3-208ENST00000594387 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
IRF3-208ENST00000594387 TNS2Q63HR2 1409 aa23.8■■□□□ 1.4
IRF3-208ENST00000594387 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
IRF3-208ENST00000594387 EZH2Q15910 746 aaKnown RBP23.79■■□□□ 1.4
IRF3-208ENST00000594387 INSRP06213 1382 aa23.78■■□□□ 1.4
IRF3-208ENST00000594387 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
IRF3-208ENST00000594387 CAMKK2Q96RR4 588 aa23.77■■□□□ 1.4
IRF3-208ENST00000594387 BCL11BQ9C0K0 894 aaPredicted RBP23.77■■□□□ 1.4
IRF3-208ENST00000594387 NSD2O96028 1365 aa23.76■■□□□ 1.39
IRF3-208ENST00000594387 BCL9O00512 1426 aa23.76■■□□□ 1.39
IRF3-208ENST00000594387 TNNT2P45379 298 aaPredicted RBP23.75■■□□□ 1.39
IRF3-208ENST00000594387 NBPF14Q5TI25 921 aa23.75■■□□□ 1.39
IRF3-208ENST00000594387 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
IRF3-208ENST00000594387 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
IRF3-208ENST00000594387 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
IRF3-208ENST00000594387 DDX54Q8TDD1 881 aaKnown RBP23.74■■□□□ 1.39
IRF3-208ENST00000594387 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
IRF3-208ENST00000594387 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
IRF3-208ENST00000594387 NBPF6Q5VWK0 638 aa23.73■■□□□ 1.39
IRF3-208ENST00000594387 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
IRF3-208ENST00000594387 NBPF4Q96M43 638 aa23.73■■□□□ 1.39
IRF3-208ENST00000594387 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
IRF3-208ENST00000594387 RREB1Q92766 1687 aa23.72■■□□□ 1.39
IRF3-208ENST00000594387 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
IRF3-208ENST00000594387 PLSCR1O15162 318 aa23.71■■□□□ 1.39
IRF3-208ENST00000594387 ZCRB1Q8TBF4 217 aaKnown RBP23.71■■□□□ 1.39
IRF3-208ENST00000594387 NHSQ6T4R5 1651 aa23.7■■□□□ 1.38
IRF3-208ENST00000594387 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
IRF3-208ENST00000594387 ACSBG1Q96GR2 724 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms