RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.48
ZNF558-202ENST00000593891 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
ZNF558-202ENST00000593891 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
ZNF558-202ENST00000593891 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
ZNF558-202ENST00000593891 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
ZNF558-202ENST00000593891 POGKQ9P215 609 aa18■□□□□ 0.47
ZNF558-202ENST00000593891 CPDO75976 1380 aa18■□□□□ 0.47
ZNF558-202ENST00000593891 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
ZNF558-202ENST00000593891 WDR90Q96KV7 1748 aa17.98■□□□□ 0.47
ZNF558-202ENST00000593891 TOM1L2Q6ZVM7 507 aa17.98■□□□□ 0.47
ZNF558-202ENST00000593891 C16orf71Q8IYS4 520 aaPredicted RBP17.98■□□□□ 0.47
ZNF558-202ENST00000593891 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
ZNF558-202ENST00000593891 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
ZNF558-202ENST00000593891 CD2APQ9Y5K6 639 aa17.97■□□□□ 0.47
ZNF558-202ENST00000593891 PNPLA7Q6ZV29 1317 aa17.97■□□□□ 0.47
ZNF558-202ENST00000593891 PPLO60437 1756 aa17.96■□□□□ 0.47
ZNF558-202ENST00000593891 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
ZNF558-202ENST00000593891 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
ZNF558-202ENST00000593891 FSTL1Q12841 308 aa17.96■□□□□ 0.47
ZNF558-202ENST00000593891 FAM161AQ3B820 660 aa17.96■□□□□ 0.47
ZNF558-202ENST00000593891 EXOC5O00471 708 aa17.95■□□□□ 0.46
ZNF558-202ENST00000593891 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
ZNF558-202ENST00000593891 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
ZNF558-202ENST00000593891 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
ZNF558-202ENST00000593891 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
ZNF558-202ENST00000593891 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
ZNF558-202ENST00000593891 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
ZNF558-202ENST00000593891 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
ZNF558-202ENST00000593891 TULP4Q9NRJ4 1543 aa17.92■□□□□ 0.46
ZNF558-202ENST00000593891 BRD4O60885 1362 aaPredicted RBP17.91■□□□□ 0.46
ZNF558-202ENST00000593891 LMO7Q8WWI1 1683 aa17.91■□□□□ 0.46
ZNF558-202ENST00000593891 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
ZNF558-202ENST00000593891 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
ZNF558-202ENST00000593891 NMRK2Q9NPI5 230 aa17.91■□□□□ 0.46
ZNF558-202ENST00000593891 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
ZNF558-202ENST00000593891 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
ZNF558-202ENST00000593891 MSH5O43196 834 aa17.9■□□□□ 0.46
ZNF558-202ENST00000593891 GCP02774 474 aa17.9■□□□□ 0.46
ZNF558-202ENST00000593891 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
ZNF558-202ENST00000593891 PCNTO95613 3336 aa17.88■□□□□ 0.45
ZNF558-202ENST00000593891 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
ZNF558-202ENST00000593891 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
ZNF558-202ENST00000593891 COL24A1Q17RW2 1714 aa17.88■□□□□ 0.45
ZNF558-202ENST00000593891 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
ZNF558-202ENST00000593891 NLRP13Q86W25 1043 aa17.87■□□□□ 0.45
ZNF558-202ENST00000593891 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
ZNF558-202ENST00000593891 MINK1Q8N4C8 1332 aaPredicted RBP17.86■□□□□ 0.45
ZNF558-202ENST00000593891 USP19O94966 1318 aa17.85■□□□□ 0.45
ZNF558-202ENST00000593891 USP6P35125 1406 aa17.85■□□□□ 0.45
ZNF558-202ENST00000593891 ITGAEP38570 1179 aa17.85■□□□□ 0.45
ZNF558-202ENST00000593891 MLLT1Q03111 559 aaPredicted RBP17.85■□□□□ 0.45
ZNF558-202ENST00000593891 WDR17Q8IZU2 1322 aa17.84■□□□□ 0.45
ZNF558-202ENST00000593891 IGSF1Q8N6C5 1336 aa17.83■□□□□ 0.44
ZNF558-202ENST00000593891 MSL1Q68DK7 614 aa17.83■□□□□ 0.44
ZNF558-202ENST00000593891 CFAP70Q5T0N1 1121 aa17.82■□□□□ 0.44
ZNF558-202ENST00000593891 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
ZNF558-202ENST00000593891 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
ZNF558-202ENST00000593891 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
ZNF558-202ENST00000593891 CSB-PGBD3P0DP91 1061 aa17.8■□□□□ 0.44
ZNF558-202ENST00000593891 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
ZNF558-202ENST00000593891 SMC1BQ8NDV3 1235 aa17.79■□□□□ 0.44
ZNF558-202ENST00000593891 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
ZNF558-202ENST00000593891 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
ZNF558-202ENST00000593891 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
ZNF558-202ENST00000593891 ACEP12821 1306 aa17.77■□□□□ 0.44
ZNF558-202ENST00000593891 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
ZNF558-202ENST00000593891 KCNQ4P56696 695 aa17.75■□□□□ 0.43
ZNF558-202ENST00000593891 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
ZNF558-202ENST00000593891 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
ZNF558-202ENST00000593891 KDM2BQ8NHM5 1336 aa17.74■□□□□ 0.43
ZNF558-202ENST00000593891 ABHD8Q96I13 439 aa17.74■□□□□ 0.43
ZNF558-202ENST00000593891 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
ZNF558-202ENST00000593891 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
ZNF558-202ENST00000593891 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
ZNF558-202ENST00000593891 FOXN1O15353 648 aa17.71■□□□□ 0.43
ZNF558-202ENST00000593891 ARHGAP27Q6ZUM4 889 aa17.71■□□□□ 0.43
ZNF558-202ENST00000593891 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
ZNF558-202ENST00000593891 RGS19P49795 217 aa17.7■□□□□ 0.42
ZNF558-202ENST00000593891 FLAD1Q8NFF5 587 aa17.7■□□□□ 0.42
ZNF558-202ENST00000593891 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
ZNF558-202ENST00000593891 CTCFP49711 727 aaPredicted RBP17.69■□□□□ 0.42
ZNF558-202ENST00000593891 NLRP6P59044 892 aa17.69■□□□□ 0.42
ZNF558-202ENST00000593891 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
ZNF558-202ENST00000593891 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
ZNF558-202ENST00000593891 BTAF1O14981 1849 aa17.68■□□□□ 0.42
ZNF558-202ENST00000593891 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
ZNF558-202ENST00000593891 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
ZNF558-202ENST00000593891 PPIP5K1Q6PFW1 1433 aa17.67■□□□□ 0.42
ZNF558-202ENST00000593891 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
ZNF558-202ENST00000593891 CCNL1Q9UK58 526 aaPredicted RBP17.67■□□□□ 0.42
ZNF558-202ENST00000593891 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
ZNF558-202ENST00000593891 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
ZNF558-202ENST00000593891 C9orf131Q5VYM1 1079 aa17.66■□□□□ 0.42
ZNF558-202ENST00000593891 BCS1LQ9Y276 419 aa17.66■□□□□ 0.42
ZNF558-202ENST00000593891 CCDC85CA6NKD9 419 aa17.65■□□□□ 0.42
ZNF558-202ENST00000593891 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
ZNF558-202ENST00000593891 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
ZNF558-202ENST00000593891 ABCC6O95255 1503 aa17.64■□□□□ 0.41
ZNF558-202ENST00000593891 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
ZNF558-202ENST00000593891 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms