RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FYB1O15117 783 aa18.16■□□□□ 0.5
VMP1-217ENST00000593168 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
VMP1-217ENST00000593168 SPATA31A5Q5VU36 1347 aa18.16■□□□□ 0.5
VMP1-217ENST00000593168 SPATA31A7Q8IWB4 1347 aa18.16■□□□□ 0.5
VMP1-217ENST00000593168 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
VMP1-217ENST00000593168 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
VMP1-217ENST00000593168 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
VMP1-217ENST00000593168 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
VMP1-217ENST00000593168 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
VMP1-217ENST00000593168 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
VMP1-217ENST00000593168 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
VMP1-217ENST00000593168 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
VMP1-217ENST00000593168 USP6P35125 1406 aa18.12■□□□□ 0.49
VMP1-217ENST00000593168 EZH2Q15910 746 aaKnown RBP18.11■□□□□ 0.49
VMP1-217ENST00000593168 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
VMP1-217ENST00000593168 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
VMP1-217ENST00000593168 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
VMP1-217ENST00000593168 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
VMP1-217ENST00000593168 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
VMP1-217ENST00000593168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.49
VMP1-217ENST00000593168 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
VMP1-217ENST00000593168 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
VMP1-217ENST00000593168 PRDM11Q9NQV5 511 aa18.09■□□□□ 0.49
VMP1-217ENST00000593168 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.49
VMP1-217ENST00000593168 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
VMP1-217ENST00000593168 NRKQ7Z2Y5 1582 aa18.08■□□□□ 0.48
VMP1-217ENST00000593168 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
VMP1-217ENST00000593168 RREB1Q92766 1687 aa18.07■□□□□ 0.48
VMP1-217ENST00000593168 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
VMP1-217ENST00000593168 TRIM37O94972 964 aa18.06■□□□□ 0.48
VMP1-217ENST00000593168 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
VMP1-217ENST00000593168 NME9Q86XW9 330 aa18.06■□□□□ 0.48
VMP1-217ENST00000593168 COG3Q96JB2 828 aa18.05■□□□□ 0.48
VMP1-217ENST00000593168 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
VMP1-217ENST00000593168 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
VMP1-217ENST00000593168 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
VMP1-217ENST00000593168 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
VMP1-217ENST00000593168 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
VMP1-217ENST00000593168 INSRP06213 1382 aa18.03■□□□□ 0.48
VMP1-217ENST00000593168 USP31Q70CQ4 1352 aa18.03■□□□□ 0.48
VMP1-217ENST00000593168 APBA3O96018 575 aa18.02■□□□□ 0.48
VMP1-217ENST00000593168 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.48
VMP1-217ENST00000593168 MTHFSP49914 203 aa18.02■□□□□ 0.48
VMP1-217ENST00000593168 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
VMP1-217ENST00000593168 AATKQ6ZMQ8 1374 aa18.02■□□□□ 0.47
VMP1-217ENST00000593168 LMO7Q8WWI1 1683 aa18■□□□□ 0.47
VMP1-217ENST00000593168 OVOS2A0A0J9YW53 1432 aa18■□□□□ 0.47
VMP1-217ENST00000593168 OVOS2Q6IE36 1432 aa18■□□□□ 0.47
VMP1-217ENST00000593168 CFAP53Q96M91 514 aa18■□□□□ 0.47
VMP1-217ENST00000593168 USP35Q9P2H5 1018 aa18■□□□□ 0.47
VMP1-217ENST00000593168 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
VMP1-217ENST00000593168 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
VMP1-217ENST00000593168 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
VMP1-217ENST00000593168 PARP4Q9UKK3 1724 aaKnown RBP17.96■□□□□ 0.47
VMP1-217ENST00000593168 EVA1CP58658 441 aa17.96■□□□□ 0.47
VMP1-217ENST00000593168 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
VMP1-217ENST00000593168 PDE3BQ13370 1112 aa17.96■□□□□ 0.47
VMP1-217ENST00000593168 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
VMP1-217ENST00000593168 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
VMP1-217ENST00000593168 NLRP6P59044 892 aa17.95■□□□□ 0.46
VMP1-217ENST00000593168 ABTB2Q8N961 1025 aa17.95■□□□□ 0.46
VMP1-217ENST00000593168 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
VMP1-217ENST00000593168 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
VMP1-217ENST00000593168 USP54Q70EL1 1684 aa17.94■□□□□ 0.46
VMP1-217ENST00000593168 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
VMP1-217ENST00000593168 MAP2P11137 1827 aaKnown RBP17.93■□□□□ 0.46
VMP1-217ENST00000593168 CPDO75976 1380 aa17.92■□□□□ 0.46
VMP1-217ENST00000593168 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
VMP1-217ENST00000593168 SBF2Q86WG5 1849 aa17.92■□□□□ 0.46
VMP1-217ENST00000593168 USP19O94966 1318 aa17.92■□□□□ 0.46
VMP1-217ENST00000593168 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
VMP1-217ENST00000593168 COL3A1P02461 1466 aaPredicted RBP17.91■□□□□ 0.46
VMP1-217ENST00000593168 FBLN1P23142 703 aa17.91■□□□□ 0.46
VMP1-217ENST00000593168 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
VMP1-217ENST00000593168 COL5A2P05997 1499 aaPredicted RBP17.9■□□□□ 0.46
VMP1-217ENST00000593168 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
VMP1-217ENST00000593168 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
VMP1-217ENST00000593168 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
VMP1-217ENST00000593168 YY1P25490 414 aa17.89■□□□□ 0.45
VMP1-217ENST00000593168 THRAP3Q9Y2W1 955 aaKnown RBP17.89■□□□□ 0.45
VMP1-217ENST00000593168 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
VMP1-217ENST00000593168 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
VMP1-217ENST00000593168 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
VMP1-217ENST00000593168 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
VMP1-217ENST00000593168 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
VMP1-217ENST00000593168 WNK3Q9BYP7 1800 aa17.87■□□□□ 0.45
VMP1-217ENST00000593168 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
VMP1-217ENST00000593168 GCP02774 474 aa17.87■□□□□ 0.45
VMP1-217ENST00000593168 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
VMP1-217ENST00000593168 KCNQ2O43526 872 aa17.86■□□□□ 0.45
VMP1-217ENST00000593168 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
VMP1-217ENST00000593168 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
VMP1-217ENST00000593168 CRB1P82279 1406 aa17.86■□□□□ 0.45
VMP1-217ENST00000593168 CASZ1Q86V15 1759 aa17.86■□□□□ 0.45
VMP1-217ENST00000593168 COL18A1P39060 1754 aa17.84■□□□□ 0.45
VMP1-217ENST00000593168 OVOS2A0A0G2JMS6 1433 aa17.84■□□□□ 0.45
VMP1-217ENST00000593168 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
VMP1-217ENST00000593168 IL13P35225 146 aa17.84■□□□□ 0.45
VMP1-217ENST00000593168 PPP1R1BQ9UD71 204 aaPredicted RBP17.84■□□□□ 0.45
VMP1-217ENST00000593168 SLIT3O75094 1523 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms