RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
CNN1-209ENST00000592338 KRT27Q7Z3Y8 459 aa22.6■■□□□ 1.21
CNN1-209ENST00000592338 KCNH5Q8NCM2 988 aa22.6■■□□□ 1.21
CNN1-209ENST00000592338 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
CNN1-209ENST00000592338 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
CNN1-209ENST00000592338 ABCC6O95255 1503 aa22.58■■□□□ 1.21
CNN1-209ENST00000592338 RGPD1P0DJD0 1748 aa22.58■■□□□ 1.21
CNN1-209ENST00000592338 AXIN2Q9Y2T1 843 aa22.58■■□□□ 1.21
CNN1-209ENST00000592338 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
CNN1-209ENST00000592338 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
CNN1-209ENST00000592338 CRB1P82279 1406 aa22.57■■□□□ 1.2
CNN1-209ENST00000592338 FAM182BQ5T319 152 aa22.55■■□□□ 1.2
CNN1-209ENST00000592338 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
CNN1-209ENST00000592338 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
CNN1-209ENST00000592338 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
CNN1-209ENST00000592338 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
CNN1-209ENST00000592338 TCP11L2Q8N4U5 519 aa22.53■■□□□ 1.2
CNN1-209ENST00000592338 BARGINQ6ZT62 677 aa22.52■■□□□ 1.2
CNN1-209ENST00000592338 SBF2Q86WG5 1849 aa22.51■■□□□ 1.19
CNN1-209ENST00000592338 WDR17Q8IZU2 1322 aa22.51■■□□□ 1.19
CNN1-209ENST00000592338 EIF4G2P78344 907 aaKnown RBP eCLIP22.5■■□□□ 1.19
CNN1-209ENST00000592338 TOM1L2Q6ZVM7 507 aa22.5■■□□□ 1.19
CNN1-209ENST00000592338 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
CNN1-209ENST00000592338 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
CNN1-209ENST00000592338 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
CNN1-209ENST00000592338 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
CNN1-209ENST00000592338 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
CNN1-209ENST00000592338 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
CNN1-209ENST00000592338 COG3Q96JB2 828 aa22.47■■□□□ 1.19
CNN1-209ENST00000592338 NSD3Q9BZ95 1437 aa22.47■■□□□ 1.19
CNN1-209ENST00000592338 CSB-PGBD3P0DP91 1061 aa22.46■■□□□ 1.19
CNN1-209ENST00000592338 FBLN1P23142 703 aa22.45■■□□□ 1.18
CNN1-209ENST00000592338 DEFB132Q7Z7B7 95 aa22.45■■□□□ 1.18
CNN1-209ENST00000592338 GGNBP2Q9H3C7 697 aa22.45■■□□□ 1.18
CNN1-209ENST00000592338 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
CNN1-209ENST00000592338 FYB1O15117 783 aa22.44■■□□□ 1.18
CNN1-209ENST00000592338 CARD14Q9BXL6 1004 aa22.44■■□□□ 1.18
CNN1-209ENST00000592338 ERBB3P21860 1342 aa22.43■■□□□ 1.18
CNN1-209ENST00000592338 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
CNN1-209ENST00000592338 SF3B2Q13435 895 aaKnown RBP22.42■■□□□ 1.18
CNN1-209ENST00000592338 MAP3K19Q56UN5 1328 aa22.41■■□□□ 1.18
CNN1-209ENST00000592338 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
CNN1-209ENST00000592338 CARD10Q9BWT7 1032 aa22.41■■□□□ 1.18
CNN1-209ENST00000592338 ANKRD24Q8TF21 1146 aa22.4■■□□□ 1.18
CNN1-209ENST00000592338 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
CNN1-209ENST00000592338 KAT6BQ8WYB5 2073 aa22.39■■□□□ 1.17
CNN1-209ENST00000592338 C11orf95C9JLR9 678 aaPredicted RBP22.37■■□□□ 1.17
CNN1-209ENST00000592338 RRS1Q15050 365 aaKnown RBP22.37■■□□□ 1.17
CNN1-209ENST00000592338 FAM196AQ6ZSG2 479 aa22.37■■□□□ 1.17
CNN1-209ENST00000592338 IP6K1Q92551 441 aa22.37■■□□□ 1.17
CNN1-209ENST00000592338 NLRP2Q9NX02 1062 aa22.37■■□□□ 1.17
CNN1-209ENST00000592338 RREB1Q92766 1687 aa22.36■■□□□ 1.17
CNN1-209ENST00000592338 TRIM37O94972 964 aa22.36■■□□□ 1.17
CNN1-209ENST00000592338 HOXC9P31274 260 aa22.36■■□□□ 1.17
CNN1-209ENST00000592338 DDB1Q16531 1140 aa22.36■■□□□ 1.17
CNN1-209ENST00000592338 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
CNN1-209ENST00000592338 OVOS2A0A0G2JMS6 1433 aa22.36■■□□□ 1.17
CNN1-209ENST00000592338 SHANK3Q9BYB0 1731 aa22.35■■□□□ 1.17
CNN1-209ENST00000592338 RTL1A6NKG5 1358 aa22.35■■□□□ 1.17
CNN1-209ENST00000592338 TNS2Q63HR2 1409 aa22.34■■□□□ 1.17
CNN1-209ENST00000592338 BAG6P46379 1132 aa22.34■■□□□ 1.17
CNN1-209ENST00000592338 AMPHP49418 695 aa22.34■■□□□ 1.17
CNN1-209ENST00000592338 NUP188Q5SRE5 1749 aa22.34■■□□□ 1.17
CNN1-209ENST00000592338 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
CNN1-209ENST00000592338 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
CNN1-209ENST00000592338 MARCH10Q8NA82 808 aaPredicted RBP22.31■■□□□ 1.16
CNN1-209ENST00000592338 RGPD3A6NKT7 1758 aaPredicted RBP22.3■■□□□ 1.16
CNN1-209ENST00000592338 RGPD4Q7Z3J3 1758 aa22.3■■□□□ 1.16
CNN1-209ENST00000592338 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
CNN1-209ENST00000592338 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
CNN1-209ENST00000592338 PANK3Q9H999 370 aa22.29■■□□□ 1.16
CNN1-209ENST00000592338 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
CNN1-209ENST00000592338 APBA3O96018 575 aa22.27■■□□□ 1.16
CNN1-209ENST00000592338 IL2RBP14784 551 aa22.27■■□□□ 1.16
CNN1-209ENST00000592338 EMILIN1Q9Y6C2 1016 aa22.27■■□□□ 1.16
CNN1-209ENST00000592338 FLT4P35916 1363 aa22.26■■□□□ 1.15
CNN1-209ENST00000592338 EXOC5O00471 708 aa22.26■■□□□ 1.15
CNN1-209ENST00000592338 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
CNN1-209ENST00000592338 BTAF1O14981 1849 aa22.26■■□□□ 1.15
CNN1-209ENST00000592338 HSP90AB2PQ58FF8 381 aa22.25■■□□□ 1.15
CNN1-209ENST00000592338 DOT1LQ8TEK3 1739 aa22.25■■□□□ 1.15
CNN1-209ENST00000592338 MEGF6O75095 1541 aa22.25■■□□□ 1.15
CNN1-209ENST00000592338 SMG6Q86US8 1419 aaKnown RBP22.24■■□□□ 1.15
CNN1-209ENST00000592338 PTF1AQ7RTS3 328 aa22.24■■□□□ 1.15
CNN1-209ENST00000592338 INSRP06213 1382 aa22.24■■□□□ 1.15
CNN1-209ENST00000592338 BCL9O00512 1426 aa22.23■■□□□ 1.15
CNN1-209ENST00000592338 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
CNN1-209ENST00000592338 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
CNN1-209ENST00000592338 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
CNN1-209ENST00000592338 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
CNN1-209ENST00000592338 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
CNN1-209ENST00000592338 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
CNN1-209ENST00000592338 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
CNN1-209ENST00000592338 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
CNN1-209ENST00000592338 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
CNN1-209ENST00000592338 PKD1L3Q7Z443 1732 aa22.19■■□□□ 1.14
CNN1-209ENST00000592338 NSD2O96028 1365 aa22.18■■□□□ 1.14
CNN1-209ENST00000592338 BCL11BQ9C0K0 894 aaPredicted RBP22.17■■□□□ 1.14
CNN1-209ENST00000592338 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
CNN1-209ENST00000592338 ACSBG1Q96GR2 724 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms