RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
APOC1-207ENST00000592176 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
APOC1-207ENST00000592176 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
APOC1-207ENST00000592176 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
APOC1-207ENST00000592176 USP6P35125 1406 aa13.19□□□□□ -0.3
APOC1-207ENST00000592176 RREB1Q92766 1687 aa13.18□□□□□ -0.3
APOC1-207ENST00000592176 SOX12O15370 315 aa13.18□□□□□ -0.3
APOC1-207ENST00000592176 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
APOC1-207ENST00000592176 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
APOC1-207ENST00000592176 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
APOC1-207ENST00000592176 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
APOC1-207ENST00000592176 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
APOC1-207ENST00000592176 PTGER2P43116 358 aa13.16□□□□□ -0.3
APOC1-207ENST00000592176 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
APOC1-207ENST00000592176 BCL9O00512 1426 aa13.15□□□□□ -0.3
APOC1-207ENST00000592176 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
APOC1-207ENST00000592176 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
APOC1-207ENST00000592176 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
APOC1-207ENST00000592176 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
APOC1-207ENST00000592176 SLIT3O75094 1523 aa13.13□□□□□ -0.31
APOC1-207ENST00000592176 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
APOC1-207ENST00000592176 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
APOC1-207ENST00000592176 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
APOC1-207ENST00000592176 CCDC7Q96M83 1385 aa13.12□□□□□ -0.31
APOC1-207ENST00000592176 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
APOC1-207ENST00000592176 CPSF1Q10570 1443 aaKnown RBP13.12□□□□□ -0.31
APOC1-207ENST00000592176 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
APOC1-207ENST00000592176 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
APOC1-207ENST00000592176 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
APOC1-207ENST00000592176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.1□□□□□ -0.31
APOC1-207ENST00000592176 ARXQ96QS3 562 aa13.09□□□□□ -0.31
APOC1-207ENST00000592176 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
APOC1-207ENST00000592176 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
APOC1-207ENST00000592176 COL18A1P39060 1754 aa13.09□□□□□ -0.31
APOC1-207ENST00000592176 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
APOC1-207ENST00000592176 IL2RBP14784 551 aa13.08□□□□□ -0.32
APOC1-207ENST00000592176 NEUROD1Q13562 356 aa13.08□□□□□ -0.32
APOC1-207ENST00000592176 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
APOC1-207ENST00000592176 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
APOC1-207ENST00000592176 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
APOC1-207ENST00000592176 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
APOC1-207ENST00000592176 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
APOC1-207ENST00000592176 NME9Q86XW9 330 aa13.06□□□□□ -0.32
APOC1-207ENST00000592176 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
APOC1-207ENST00000592176 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
APOC1-207ENST00000592176 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 CASZ1Q86V15 1759 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 GPR162Q16538 588 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
APOC1-207ENST00000592176 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 ERBB3P21860 1342 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
APOC1-207ENST00000592176 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
APOC1-207ENST00000592176 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
APOC1-207ENST00000592176 ZNF827Q17R98 1081 aa13.03□□□□□ -0.32
APOC1-207ENST00000592176 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
APOC1-207ENST00000592176 POLD1P28340 1107 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 NFAT5O94916 1531 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.33
APOC1-207ENST00000592176 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 IP6K1Q92551 441 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
APOC1-207ENST00000592176 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 MYOM1P52179 1685 aa13.01□□□□□ -0.33
APOC1-207ENST00000592176 MAP3K5Q99683 1374 aa13□□□□□ -0.33
APOC1-207ENST00000592176 TFCP2L1Q9NZI6 479 aa13□□□□□ -0.33
APOC1-207ENST00000592176 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
APOC1-207ENST00000592176 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
APOC1-207ENST00000592176 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
APOC1-207ENST00000592176 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
APOC1-207ENST00000592176 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
APOC1-207ENST00000592176 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
APOC1-207ENST00000592176 ABCC6O95255 1503 aa12.98□□□□□ -0.33
APOC1-207ENST00000592176 KCNQ4P56696 695 aa12.98□□□□□ -0.33
APOC1-207ENST00000592176 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
APOC1-207ENST00000592176 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
APOC1-207ENST00000592176 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
APOC1-207ENST00000592176 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
APOC1-207ENST00000592176 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.34
APOC1-207ENST00000592176 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
APOC1-207ENST00000592176 MSH5O43196 834 aa12.95□□□□□ -0.34
APOC1-207ENST00000592176 AMPHP49418 695 aa12.95□□□□□ -0.34
APOC1-207ENST00000592176 COG3Q96JB2 828 aa12.95□□□□□ -0.34
APOC1-207ENST00000592176 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
APOC1-207ENST00000592176 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
APOC1-207ENST00000592176 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
APOC1-207ENST00000592176 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
APOC1-207ENST00000592176 FBLN1P23142 703 aa12.93□□□□□ -0.34
APOC1-207ENST00000592176 HOXC9P31274 260 aa12.93□□□□□ -0.34
APOC1-207ENST00000592176 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
APOC1-207ENST00000592176 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
APOC1-207ENST00000592176 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
APOC1-207ENST00000592176 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
APOC1-207ENST00000592176 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms