RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
NPC1-213ENST00000591955 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
NPC1-213ENST00000591955 SOGA1O94964 1423 aa8.25□□□□□ -1.09
NPC1-213ENST00000591955 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
NPC1-213ENST00000591955 CEP170Q5SW79 1584 aa8.24□□□□□ -1.09
NPC1-213ENST00000591955 CLCN1P35523 988 aa8.23□□□□□ -1.09
NPC1-213ENST00000591955 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
NPC1-213ENST00000591955 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
NPC1-213ENST00000591955 CUX1P39880 1505 aa8.23□□□□□ -1.09
NPC1-213ENST00000591955 PPFIA3O75145 1194 aa8.22□□□□□ -1.09
NPC1-213ENST00000591955 ABCA5Q8WWZ7 1642 aa8.21□□□□□ -1.09
NPC1-213ENST00000591955 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.1
NPC1-213ENST00000591955 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
NPC1-213ENST00000591955 CDK15Q96Q40 435 aa8.21□□□□□ -1.1
NPC1-213ENST00000591955 GOLGA3Q08378 1498 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 MAN1A2O60476 641 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 RASSF7Q02833 373 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 KDM6BO15054 1643 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 SHROOM2Q13796 1616 aa8.2□□□□□ -1.1
NPC1-213ENST00000591955 TSPOAP1O95153 1857 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 DIP2BQ9P265 1576 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 GDF11O95390 407 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
NPC1-213ENST00000591955 CDK11AQ9UQ88 783 aaPredicted RBP8.19□□□□□ -1.1
NPC1-213ENST00000591955 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
NPC1-213ENST00000591955 CCER2I3L3R5 266 aa8.18□□□□□ -1.1
NPC1-213ENST00000591955 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
NPC1-213ENST00000591955 UBE2Q2Q8WVN8 375 aa8.18□□□□□ -1.1
NPC1-213ENST00000591955 ITPKCQ96DU7 683 aa8.18□□□□□ -1.1
NPC1-213ENST00000591955 KRT76Q01546 638 aa8.17□□□□□ -1.1
NPC1-213ENST00000591955 C6orf118Q5T5N4 469 aa8.17□□□□□ -1.1
NPC1-213ENST00000591955 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
NPC1-213ENST00000591955 GRIN2AQ12879 1464 aa8.17□□□□□ -1.1
NPC1-213ENST00000591955 HECW2Q9P2P5 1572 aa8.17□□□□□ -1.1
NPC1-213ENST00000591955 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 NR3C2P08235 984 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 NDUFV2P19404 249 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 NR5A1Q13285 461 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 TIMELESSQ9UNS1 1208 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 ADAMTS8Q9UP79 889 aa8.16□□□□□ -1.1
NPC1-213ENST00000591955 RNF225M0QZC1 329 aaPredicted RBP8.15□□□□□ -1.1
NPC1-213ENST00000591955 MTMR2Q13614 643 aa8.15□□□□□ -1.1
NPC1-213ENST00000591955 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
NPC1-213ENST00000591955 SOS2Q07890 1332 aaPredicted RBP8.14□□□□□ -1.11
NPC1-213ENST00000591955 MOXD2PA6NHM9 499 aa8.14□□□□□ -1.11
NPC1-213ENST00000591955 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
NPC1-213ENST00000591955 MEIOBQ8N635 442 aa8.14□□□□□ -1.11
NPC1-213ENST00000591955 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
NPC1-213ENST00000591955 DNMT3LQ9UJW3 386 aa8.14□□□□□ -1.11
NPC1-213ENST00000591955 NUP160Q12769 1436 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 BMP2P12643 396 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 GRM5P41594 1212 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 ADCY10Q96PN6 1610 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 ADGRL1O94910 1474 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
NPC1-213ENST00000591955 UPP2O95045 317 aa8.12□□□□□ -1.11
NPC1-213ENST00000591955 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
NPC1-213ENST00000591955 CTHP32929 405 aa8.12□□□□□ -1.11
NPC1-213ENST00000591955 DEKP35659 375 aaKnown RBP8.12□□□□□ -1.11
NPC1-213ENST00000591955 RTL5Q5HYW3 569 aaPredicted RBP8.12□□□□□ -1.11
NPC1-213ENST00000591955 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
NPC1-213ENST00000591955 KRI1Q8N9T8 703 aaKnown RBP8.12□□□□□ -1.11
NPC1-213ENST00000591955 CNTNAP3BQ96NU0 1288 aa8.12□□□□□ -1.11
NPC1-213ENST00000591955 CNTNAP3Q9BZ76 1288 aa8.12□□□□□ -1.11
NPC1-213ENST00000591955 KIF21BO75037 1637 aa8.11□□□□□ -1.11
NPC1-213ENST00000591955 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
NPC1-213ENST00000591955 USP35Q9P2H5 1018 aa8.11□□□□□ -1.11
NPC1-213ENST00000591955 MAPKBP1O60336 1514 aa8.1□□□□□ -1.11
NPC1-213ENST00000591955 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
NPC1-213ENST00000591955 SPTLC1O15269 473 aa8.1□□□□□ -1.11
NPC1-213ENST00000591955 F12P00748 615 aaPredicted RBP8.1□□□□□ -1.11
NPC1-213ENST00000591955 FAM69CQ0P6D2 419 aa8.1□□□□□ -1.11
NPC1-213ENST00000591955 PPRC1Q5VV67 1664 aaKnown RBP8.1□□□□□ -1.11
NPC1-213ENST00000591955 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.11
NPC1-213ENST00000591955 ZNF385CQ66K41 422 aaPredicted RBP8.09□□□□□ -1.11
NPC1-213ENST00000591955 NANOS1Q8WY41 292 aaKnown RBP8.09□□□□□ -1.11
NPC1-213ENST00000591955 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
NPC1-213ENST00000591955 DHX57Q6P158 1386 aaKnown RBP8.09□□□□□ -1.12
NPC1-213ENST00000591955 GJA5P36382 358 aa8.08□□□□□ -1.12
NPC1-213ENST00000591955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.08□□□□□ -1.12
NPC1-213ENST00000591955 GLIPR1L2Q4G1C9 344 aa8.08□□□□□ -1.12
NPC1-213ENST00000591955 COL25A1Q9BXS0 654 aaPredicted RBP8.08□□□□□ -1.12
NPC1-213ENST00000591955 DNMT3AQ9Y6K1 912 aaPredicted RBP8.08□□□□□ -1.12
NPC1-213ENST00000591955 PRG4Q92954 1404 aaPredicted RBP8.08□□□□□ -1.12
NPC1-213ENST00000591955 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
NPC1-213ENST00000591955 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
NPC1-213ENST00000591955 IGHA1P01876 353 aa8.06□□□□□ -1.12
NPC1-213ENST00000591955 PTSQ03393 145 aa8.06□□□□□ -1.12
NPC1-213ENST00000591955 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
NPC1-213ENST00000591955 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
NPC1-213ENST00000591955 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
NPC1-213ENST00000591955 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
NPC1-213ENST00000591955 ARHGEF15O94989 841 aa8.05□□□□□ -1.12
NPC1-213ENST00000591955 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
NPC1-213ENST00000591955 AGERQ15109 404 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms