RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
NPC1-209ENST00000590723 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
NPC1-209ENST00000590723 ADAM32Q8TC27 787 aa13.11□□□□□ -0.31
NPC1-209ENST00000590723 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
NPC1-209ENST00000590723 FSHRP23945 695 aa13.1□□□□□ -0.31
NPC1-209ENST00000590723 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
NPC1-209ENST00000590723 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
NPC1-209ENST00000590723 GRM5P41594 1212 aa13.09□□□□□ -0.31
NPC1-209ENST00000590723 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
NPC1-209ENST00000590723 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
NPC1-209ENST00000590723 SENP2Q9HC62 589 aa13.08□□□□□ -0.32
NPC1-209ENST00000590723 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
NPC1-209ENST00000590723 DHX9Q08211 1270 aaKnown RBP13.06□□□□□ -0.32
NPC1-209ENST00000590723 CCDC116Q8IYX3 515 aa13.06□□□□□ -0.32
NPC1-209ENST00000590723 KCTD15Q96SI1 283 aaPredicted RBP13.06□□□□□ -0.32
NPC1-209ENST00000590723 ATP13A2Q9NQ11 1180 aa13.06□□□□□ -0.32
NPC1-209ENST00000590723 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
NPC1-209ENST00000590723 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
NPC1-209ENST00000590723 OCSTAMPQ9BR26 566 aa13.05□□□□□ -0.32
NPC1-209ENST00000590723 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
NPC1-209ENST00000590723 PGPEP1Q9NXJ5 209 aa13.04□□□□□ -0.32
NPC1-209ENST00000590723 NR3C2P08235 984 aa13.03□□□□□ -0.32
NPC1-209ENST00000590723 TIMP2P16035 220 aa13.03□□□□□ -0.32
NPC1-209ENST00000590723 NR1H3Q13133 447 aa13.03□□□□□ -0.32
NPC1-209ENST00000590723 ZIC2O95409 532 aaPredicted RBP13.02□□□□□ -0.33
NPC1-209ENST00000590723 DACH1Q9UI36 760 aa13.02□□□□□ -0.33
NPC1-209ENST00000590723 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
NPC1-209ENST00000590723 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
NPC1-209ENST00000590723 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
NPC1-209ENST00000590723 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
NPC1-209ENST00000590723 SCARF1Q14162 830 aa13□□□□□ -0.33
NPC1-209ENST00000590723 CCDC125Q86Z20 511 aa13□□□□□ -0.33
NPC1-209ENST00000590723 KLF16Q9BXK1 252 aaPredicted RBP13□□□□□ -0.33
NPC1-209ENST00000590723 GMPR2Q9P2T1 348 aaKnown RBP13□□□□□ -0.33
NPC1-209ENST00000590723 PCDHB9Q9Y5E1 797 aa13□□□□□ -0.33
NPC1-209ENST00000590723 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
NPC1-209ENST00000590723 UPP2O95045 317 aa12.99□□□□□ -0.33
NPC1-209ENST00000590723 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
NPC1-209ENST00000590723 ITPKCQ96DU7 683 aa12.99□□□□□ -0.33
NPC1-209ENST00000590723 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
NPC1-209ENST00000590723 FLIIQ13045 1269 aa12.98□□□□□ -0.33
NPC1-209ENST00000590723 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
NPC1-209ENST00000590723 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
NPC1-209ENST00000590723 MCM6Q14566 821 aa12.97□□□□□ -0.33
NPC1-209ENST00000590723 INTS6LQ5JSJ4 861 aaKnown RBP12.97□□□□□ -0.33
NPC1-209ENST00000590723 PPP1R26Q5T8A7 1209 aaPredicted RBP12.97□□□□□ -0.33
NPC1-209ENST00000590723 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
NPC1-209ENST00000590723 MRPL14Q6P1L8 145 aaKnown RBP12.96□□□□□ -0.33
NPC1-209ENST00000590723 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
NPC1-209ENST00000590723 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.33
NPC1-209ENST00000590723 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
NPC1-209ENST00000590723 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
NPC1-209ENST00000590723 BMP1P13497 986 aa12.94□□□□□ -0.34
NPC1-209ENST00000590723 ESPNB1AK53 854 aa12.93□□□□□ -0.34
NPC1-209ENST00000590723 POTECB2RU33 542 aa12.93□□□□□ -0.34
NPC1-209ENST00000590723 TRIM46Q7Z4K8 759 aa12.93□□□□□ -0.34
NPC1-209ENST00000590723 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
NPC1-209ENST00000590723 GPR37L1O60883 481 aa12.92□□□□□ -0.34
NPC1-209ENST00000590723 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPC1-209ENST00000590723 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
NPC1-209ENST00000590723 MEIOBQ8N635 442 aa12.92□□□□□ -0.34
NPC1-209ENST00000590723 RAB15P59190 212 aa12.91□□□□□ -0.34
NPC1-209ENST00000590723 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
NPC1-209ENST00000590723 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
NPC1-209ENST00000590723 RAD21O60216 631 aa12.9□□□□□ -0.34
NPC1-209ENST00000590723 ABL2P42684 1182 aa12.9□□□□□ -0.34
NPC1-209ENST00000590723 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
NPC1-209ENST00000590723 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
NPC1-209ENST00000590723 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
NPC1-209ENST00000590723 WIZO95785 1651 aa12.87□□□□□ -0.35
NPC1-209ENST00000590723 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
NPC1-209ENST00000590723 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
NPC1-209ENST00000590723 BMP2P12643 396 aa12.87□□□□□ -0.35
NPC1-209ENST00000590723 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
NPC1-209ENST00000590723 Q6ZVU0 165 aa12.86□□□□□ -0.35
NPC1-209ENST00000590723 SNRPBP14678 240 aaKnown RBP12.85□□□□□ -0.35
NPC1-209ENST00000590723 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
NPC1-209ENST00000590723 SOX11P35716 441 aa12.84□□□□□ -0.35
NPC1-209ENST00000590723 IRF5Q13568 498 aa12.84□□□□□ -0.35
NPC1-209ENST00000590723 C6orf118Q5T5N4 469 aa12.84□□□□□ -0.35
NPC1-209ENST00000590723 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
NPC1-209ENST00000590723 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
NPC1-209ENST00000590723 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
NPC1-209ENST00000590723 TMPRSS4Q9NRS4 437 aa12.83□□□□□ -0.36
NPC1-209ENST00000590723 CBLBQ13191 982 aa12.82□□□□□ -0.36
NPC1-209ENST00000590723 NESP48681 1621 aa12.81□□□□□ -0.36
NPC1-209ENST00000590723 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
NPC1-209ENST00000590723 VAC14Q08AM6 782 aa12.8□□□□□ -0.36
NPC1-209ENST00000590723 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
NPC1-209ENST00000590723 MAN1A2O60476 641 aa12.79□□□□□ -0.36
NPC1-209ENST00000590723 ADH1AP07327 375 aa12.79□□□□□ -0.36
NPC1-209ENST00000590723 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
NPC1-209ENST00000590723 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
NPC1-209ENST00000590723 CYLDQ9NQC7 956 aa12.78□□□□□ -0.36
NPC1-209ENST00000590723 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
NPC1-209ENST00000590723 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
NPC1-209ENST00000590723 PCDHB11Q9Y5F2 797 aa12.77□□□□□ -0.37
NPC1-209ENST00000590723 SPINT1O43278 529 aa12.76□□□□□ -0.37
NPC1-209ENST00000590723 LILRA1O75019 489 aa12.76□□□□□ -0.37
NPC1-209ENST00000590723 ERVK-9P63128 1117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms