RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 RIMS2Q9UQ26 1411 aa24.08■■□□□ 1.45
MBD3-207ENST00000590550 TSPOAP1O95153 1857 aa24.08■■□□□ 1.45
MBD3-207ENST00000590550 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.44
MBD3-207ENST00000590550 DCTN1Q14203 1278 aa24.08■■□□□ 1.44
MBD3-207ENST00000590550 VAMP4O75379 141 aa24.07■■□□□ 1.44
MBD3-207ENST00000590550 ALDH1L2Q3SY69 923 aa24.06■■□□□ 1.44
MBD3-207ENST00000590550 MBIPQ9NS73 344 aa24.06■■□□□ 1.44
MBD3-207ENST00000590550 METP08581 1390 aa24.06■■□□□ 1.44
MBD3-207ENST00000590550 MAP2P11137 1827 aaKnown RBP24.06■■□□□ 1.44
MBD3-207ENST00000590550 PPIP5K1Q6PFW1 1433 aa24.05■■□□□ 1.44
MBD3-207ENST00000590550 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
MBD3-207ENST00000590550 IL13P35225 146 aa24.05■■□□□ 1.44
MBD3-207ENST00000590550 NUCB1Q02818 461 aa24.04■■□□□ 1.44
MBD3-207ENST00000590550 FSD2A1L4K1 749 aa24.04■■□□□ 1.44
MBD3-207ENST00000590550 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
MBD3-207ENST00000590550 ANKRD45Q5TZF3 282 aa24.03■■□□□ 1.44
MBD3-207ENST00000590550 MRPL50Q8N5N7 158 aaKnown RBP24.03■■□□□ 1.44
MBD3-207ENST00000590550 CHD1LQ86WJ1 897 aa24.03■■□□□ 1.44
MBD3-207ENST00000590550 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
MBD3-207ENST00000590550 ZBTB7BO15156 539 aaPredicted RBP24.02■■□□□ 1.44
MBD3-207ENST00000590550 C8orf58Q8NAV2 365 aa24.02■■□□□ 1.44
MBD3-207ENST00000590550 ERBB4Q15303 1308 aa24.02■■□□□ 1.44
MBD3-207ENST00000590550 ATP7BP35670 1465 aa24.01■■□□□ 1.43
MBD3-207ENST00000590550 ESPNB1AK53 854 aa24■■□□□ 1.43
MBD3-207ENST00000590550 TWISTNBQ3B726 338 aaPredicted RBP23.99■■□□□ 1.43
MBD3-207ENST00000590550 COG3Q96JB2 828 aa23.99■■□□□ 1.43
MBD3-207ENST00000590550 GNAI1P63096 354 aa23.98■■□□□ 1.43
MBD3-207ENST00000590550 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
MBD3-207ENST00000590550 A0A0U1RQG5 324 aaPredicted RBP23.98■■□□□ 1.43
MBD3-207ENST00000590550 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
MBD3-207ENST00000590550 SIRT2Q8IXJ6 389 aa23.98■■□□□ 1.43
MBD3-207ENST00000590550 CPSF1Q10570 1443 aaKnown RBP23.98■■□□□ 1.43
MBD3-207ENST00000590550 CPS1P31327 1500 aa23.97■■□□□ 1.43
MBD3-207ENST00000590550 SOX12O15370 315 aa23.97■■□□□ 1.43
MBD3-207ENST00000590550 KRT24Q2M2I5 525 aa23.97■■□□□ 1.43
MBD3-207ENST00000590550 IFT57Q9NWB7 429 aa23.97■■□□□ 1.43
MBD3-207ENST00000590550 EDC4Q6P2E9 1401 aaKnown RBP23.97■■□□□ 1.43
MBD3-207ENST00000590550 MCM4P33991 863 aa23.96■■□□□ 1.43
MBD3-207ENST00000590550 RIMBP3CA6NJZ7 1639 aa23.96■■□□□ 1.43
MBD3-207ENST00000590550 RIMBP3BA6NNM3 1639 aa23.96■■□□□ 1.43
MBD3-207ENST00000590550 RIMBP3Q9UFD9 1639 aa23.96■■□□□ 1.43
MBD3-207ENST00000590550 ZNF853P0CG23 659 aa23.95■■□□□ 1.42
MBD3-207ENST00000590550 CCDC61Q9Y6R9 512 aa23.95■■□□□ 1.42
MBD3-207ENST00000590550 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
MBD3-207ENST00000590550 SETD1AO15047 1707 aaKnown RBP23.94■■□□□ 1.42
MBD3-207ENST00000590550 PRR36Q9H6K5 1346 aa23.93■■□□□ 1.42
MBD3-207ENST00000590550 TRAK2O60296 914 aa23.93■■□□□ 1.42
MBD3-207ENST00000590550 MRE11P49959 708 aa23.93■■□□□ 1.42
MBD3-207ENST00000590550 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
MBD3-207ENST00000590550 HSCBQ8IWL3 235 aa23.92■■□□□ 1.42
MBD3-207ENST00000590550 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
MBD3-207ENST00000590550 BRPF1P55201 1214 aaPredicted RBP23.92■■□□□ 1.42
MBD3-207ENST00000590550 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
MBD3-207ENST00000590550 TRIM44Q96DX7 344 aaPredicted RBP23.91■■□□□ 1.42
MBD3-207ENST00000590550 GRPEL1Q9HAV7 217 aa23.91■■□□□ 1.42
MBD3-207ENST00000590550 SULT6B1Q6IMI4 303 aa23.91■■□□□ 1.42
MBD3-207ENST00000590550 PDCL3Q9H2J4 239 aa23.91■■□□□ 1.42
MBD3-207ENST00000590550 ESF1Q9H501 851 aaKnown RBP23.91■■□□□ 1.42
MBD3-207ENST00000590550 CDK12Q9NYV4 1490 aaPredicted RBP23.91■■□□□ 1.42
MBD3-207ENST00000590550 SPATA31D1Q6ZQQ2 1576 aa23.9■■□□□ 1.42
MBD3-207ENST00000590550 ABCC4O15439 1325 aa23.9■■□□□ 1.42
MBD3-207ENST00000590550 NRXN3Q9Y4C0 1643 aa23.9■■□□□ 1.42
MBD3-207ENST00000590550 PTCH1Q13635 1447 aa23.9■■□□□ 1.42
MBD3-207ENST00000590550 MCM10Q7L590 875 aa23.89■■□□□ 1.42
MBD3-207ENST00000590550 ARHGAP45Q92619 1136 aa23.89■■□□□ 1.42
MBD3-207ENST00000590550 FOXD4L1Q9NU39 408 aa23.89■■□□□ 1.42
MBD3-207ENST00000590550 DIP2BQ9P265 1576 aa23.89■■□□□ 1.41
MBD3-207ENST00000590550 CHMP5Q9NZZ3 219 aa23.89■■□□□ 1.41
MBD3-207ENST00000590550 BMP2KLQ5H9B9 411 aa23.88■■□□□ 1.41
MBD3-207ENST00000590550 DLG5Q8TDM6 1919 aa23.87■■□□□ 1.41
MBD3-207ENST00000590550 GCC1Q96CN9 775 aa23.87■■□□□ 1.41
MBD3-207ENST00000590550 EIF4A2Q14240 407 aaKnown RBP23.87■■□□□ 1.41
MBD3-207ENST00000590550 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
MBD3-207ENST00000590550 CD2BP2O95400 341 aaKnown RBP23.86■■□□□ 1.41
MBD3-207ENST00000590550 TPM2P07951 284 aa23.86■■□□□ 1.41
MBD3-207ENST00000590550 RBM25P49756 843 aaKnown RBP23.86■■□□□ 1.41
MBD3-207ENST00000590550 RBM10P98175 930 aaKnown RBP23.86■■□□□ 1.41
MBD3-207ENST00000590550 TBC1D9Q6ZT07 1266 aa23.86■■□□□ 1.41
MBD3-207ENST00000590550 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
MBD3-207ENST00000590550 AATKQ6ZMQ8 1374 aa23.86■■□□□ 1.41
MBD3-207ENST00000590550 PIK3R4Q99570 1358 aa23.86■■□□□ 1.41
MBD3-207ENST00000590550 KIAA1211Q6ZU35 1233 aa23.85■■□□□ 1.41
MBD3-207ENST00000590550 APBB1O00213 710 aa23.85■■□□□ 1.41
MBD3-207ENST00000590550 LMOD3Q0VAK6 560 aa23.85■■□□□ 1.41
MBD3-207ENST00000590550 HSP90AB2PQ58FF8 381 aa23.85■■□□□ 1.41
MBD3-207ENST00000590550 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.85■■□□□ 1.41
MBD3-207ENST00000590550 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
MBD3-207ENST00000590550 AGLP35573 1532 aa23.84■■□□□ 1.41
MBD3-207ENST00000590550 ROBO2Q9HCK4 1378 aa23.84■■□□□ 1.41
MBD3-207ENST00000590550 KIF2CQ99661 725 aa23.84■■□□□ 1.41
MBD3-207ENST00000590550 MIS18AQ9NYP9 233 aa23.84■■□□□ 1.41
MBD3-207ENST00000590550 C16orf71Q8IYS4 520 aaPredicted RBP23.83■■□□□ 1.41
MBD3-207ENST00000590550 API5Q9BZZ5 524 aaKnown RBP23.82■■□□□ 1.4
MBD3-207ENST00000590550 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
MBD3-207ENST00000590550 HSP90AB1P08238 724 aaKnown RBP23.81■■□□□ 1.4
MBD3-207ENST00000590550 ACEP12821 1306 aa23.81■■□□□ 1.4
MBD3-207ENST00000590550 PRDM4Q9UKN5 801 aa23.81■■□□□ 1.4
MBD3-207ENST00000590550 GSPT1P15170 499 aaKnown RBP23.8■■□□□ 1.4
MBD3-207ENST00000590550 OTUD7AQ8TE49 926 aaPredicted RBP23.8■■□□□ 1.4
MBD3-207ENST00000590550 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 876.4 ms